Anoplopoma fimbria (sablefish): 129104736
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Entry
129104736 CDS
T09102
Symbol
sox21b
Name
(RefSeq) transcription factor Sox-21-B
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129104736 (sox21b)
Transcription factors [BR:
afb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
129104736 (sox21b)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
129104736
NCBI-ProteinID:
XP_054471531
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Position
16:complement(11847247..11847984)
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AA seq
245 aa
AA seq
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MSKPMDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLMKKDKFSFPVPYNLGEHDALKVNGLSAGALSESI
MGHHDKAAAAAAAAAARVFFNPAMSNPYSFFDLGSKMTELSQPSFPYGSPLGYPPGASAA
FTGTGGVGGGAHTHSHPSPGNPGYMIPCNCTGWPSAGLQPPLAYILLPGMGKPQLEPYPA
YAAAL
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaccaatggatcacgtcaaacgcccgatgaacgccttcatggtttggtccaga
gcccagcgcaggaaaatggctcaggagaacccgaaaatgcacaattccgagatcagcaag
agattaggagcggagtggaaacttctcaccgagtccgagaaaaggccattcatcgacgaa
gccaaacgactgcgagcgatgcacatgaaggagcacccagactataaatacagaccgagg
cggaagcccaagactctgatgaaaaaagataagttttccttccccgtgccctataatctc
ggggagcacgacgcgctcaaagttaatggtctttccgctggagcactttccgagtccatc
atgggacaccacgacaaggcagcagcggccgcggccgccgcagcagcgagggtcttcttc
aacccggccatgtcgaacccctactcctttttcgacctgggatccaagatgacagagctt
tcccagccttcgtttccgtacggctctccgctgggctacccgccgggcgcctccgcggct
ttcaccgggactggcggtgtaggcggcggggcgcacacgcactcgcacccgtccccggga
aacccaggctacatgatcccctgtaactgtacgggctggccctccgcaggactgcagccg
cccttagcatacatcctgctccccgggatggggaaacctcaacttgaaccataccctgca
tacgctgcagcgttatga
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integrated database retrieval system
