KEGG   Anoplopoma fimbria (sablefish): 129104774
Entry
129104774         CDS       T09102                                 
Symbol
rev1
Name
(RefSeq) DNA repair protein REV1 isoform X1
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    129104774 (rev1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:afb03400]
    129104774 (rev1)
DNA repair and recombination proteins [BR:afb03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    129104774 (rev1)
SSDB
Motif
Pfam: IMS IMS_HHH_1 REV1_C IMS_C BRCT_2 BRCT POLH-Rev1_HhH IMS_HHH UBM LIG3_BRCT PTCB-BRCT HHH_5 Cdd1 DUF7674 DNA_pol_lambd_f
Other DBs
NCBI-GeneID: 129104774
NCBI-ProteinID: XP_054471590
LinkDB
Position
16:9387369..9398200
AA seq 1442 aa
MSRDGWAKKRANASGDNGWAEMGGYMAAKVSKLEEQFKLDAPREKQKDGSYSNIFSGVSI
YVNGYTEPSADELRRLMMLHGGQFHVYYSRSKTTHIITNNLPNNKIQDLKGEKIIRPLWI
TDSIKAGHLLPYQQYQLYTKQKGPLFPGMTLRQTSEIAGPSHGLLQPSVNQKLHLPPRSI
QHSVLNHEGSPSSCQNNSIPNASHSPLYQGNIQPQSIQQSSAVRFINPQPSHLPSTFHNA
DPRHRSLLSNPSPTKPPQSTIQTPHANLQHQRASQPQPQNTSLSNTARSGYKEVDLKING
LLQTSLELISHSKMNEMQECGKGDPLPQVVKEAHLTNGHTHLVNGALKPEDRSPVTDEPS
VDKELPRCRVKSPDVKPQSPPVQFQTKPDPYEFPHSPPKQSDPSPVFQTSSHGANEQRPK
PPPPTYLEATGTESNLLPKPIQQPHQVCSSTEKTPLSPASRSLSHTPIRLNGSHHNAFSS
DHASLNTTNLTSKPETPTEKAPSPSTSSAQLLAQTGGLISEYYSHSRLHQISTWRSNFSE
YVNELHGKRKAVGGGSFPGKDRLRKSVAQHSTDTRGTSAPASVKSCILHVDMDCFFVSVG
IRHRPELKGKPVAVTSNRGQGKVPLRPGAQPQLEQQYYQRKHTHPKPDLADEDLHRTPSQ
ESPDSHANGVDQDAATLSMAEIASCSYEARQAGVKNGMFFGKAKQLCPSLLSVPYDFEAY
KEVALTMYETLAGYTHDIEALSCDELLIDGSALLAELSINPEDLASAIRADIKEKTGCCA
SVGMGSNILLARLATRKAKPDGQYILKSEEVDDFIRDLPVTSLPGVGPVMGRKLAAMGVR
SCGDLQQVSLSQLQKKFGPRTGQTLFRFSRGLDDRPVRYEKERKSVSAEMNYNIRFTRVD
EAESFLTNLSMEVQKRLQEAGLRGRRVTFKVMVRKVGAPLEPAKYGGHGICDNLARTVML
AQSTDSGKLIAAAVIKLFHAMKLQVQDMRGVGIQVQLLDGHQSVHQDSAGPGTRSIKEML
LDRGSSARSSNRGLCKVFVFQFRSLLSSAKSIEFMIDVTDAADNNAHRENVSSTTGPSSV
SSPHPLSSPEPVPGTSRDQQACTQTPKHSRARLNYSIEVPSPSQVDRSVLEALPADLREQ
VERSWNDRDGRQSNHQSPGPQHSDPLPQPPSLKSRPASPPRPPAPGPALYAPPVGTLLLQ
IPNQPDSPGIILELPNFSQVDPDVFAALPKELQDELKSAYNRVTNVQPQAKILEQKNPLL
QLKQSGLGVGIGRVKRHYKRKNAVSPVKKAPSPLKRRNTTNSPGKALPPPIRSREPMNIL
KAENGPSTSTTKPDIPEPLSKFIPRPAPVLAGAYDLTDIKTLLREWVTTITEPMEEDILQ
VVKYCTDLIEDKDLEKLDLIIKYMKRLMQQSVESVWSMAFDFILDNVQVVVQQAYGSTLK
VA
NT seq 4329 nt   +upstreamnt  +downstreamnt
atgagtcgagatgggtgggcaaagaagagagccaatgccagtggtgacaatggttgggct
gaaatgggaggctacatggctgccaaagtttctaagctggaagagcagtttaaacttgat
gcccccagagagaaacagaaagacggttcatactccaacatttttagtggagtttccatc
tatgtcaatggatacacagagccgagtgcagatgagctacgcagattgatgatgctgcat
ggtggccagttccacgtatactactctcgttccaagaccacccacatcatcaccaacaac
ttgcccaacaacaaaattcaggatctcaaaggggaaaaaatcatcaggccactgtggatc
actgacagtatcaaggctgggcatctcctgccctaccaacagtaccagctgtacactaaa
cagaaaggcccccttttccctggcatgactctgcgccagacgtcagagattgccggaccc
agccatgggctgcttcagccgagcgtcaatcaaaagcttcatctgccaccgcgcagcatt
cagcactctgtactcaaccatgaggggtccccatccagctgccagaacaactccatcccc
aacgccagccacagtccactttaccaaggcaacattcaacctcagtccatccagcaaagc
tctgctgttcgcttcatcaacccccaaccaagtcacttaccatcaacgttccacaatgca
gatcccagacacagaagcctgctgtctaacccaagccccacaaagcccccacagtcaact
attcaaacccctcatgctaatcttcagcaccagagagctagccaaccgcaacctcagaac
acctctttaagcaacactgcccggagtggctacaaggaagtggatttaaaaataaacgga
ttacttcagacctcattggaattgatcagccattcaaaaatgaatgaaatgcaagagtgt
ggcaaaggtgatcctctcccacaggtggtgaaggaagcacatctgacaaatggacacact
cacctcgtcaatggtgccttaaagccagaggaccggtcccctgtcactgacgaaccttct
gttgacaaggagcttcctcgatgcagagtcaagagtccagatgttaaacctcagagtcct
ccagtacagtttcagacaaaacctgacccttatgagtttcctcacagtcctccaaagcaa
tcagacccgtctcctgtctttcaaaccagttcacacggagccaacgagcagagacctaaa
cctccaccacctacctacctggaggccactggcacagaaagcaacctactcccaaaaccg
atccagcagccccatcaagtctgttcaagtaccgaaaagactcccctttcacctgcatct
cgctctctttcacatactccgattcgactgaacggaagtcaccacaatgccttttcatct
gaccatgcctctttaaacacaaccaacttaacatccaaacctgaaactccaactgaaaag
gctccatcgccatctacgtcttcagcccagctgctggctcagacgggcggtttgatctct
gagtactactctcactcacgtttacatcagatctccacgtggaggtccaacttctccgag
tatgtcaatgaactgcacggcaagcgaaaagcagtgggggggggctcctttcctgggaaa
gacagactgaggaaatctgtggcccagcactctacagacactcgaggtacgtcggcacct
gcaagtgtcaaatcttgtattcttcatgtggacatggactgtttctttgtgtccgtgggg
atcagacatagaccagagctcaaagggaagcctgtggctgtgaccagtaaccgtggacag
ggtaaagtacccctgagacccggggcccaaccacagctggagcagcagtactaccagagg
aaacacactcaccctaaacctgatctagcagatgaggatctgcacagaactccttcacaa
gagagtcctgactcccatgctaacggagttgatcaggatgctgctacactctcaatggca
gagattgcttcctgcagttatgaagccaggcaggcgggcgtgaagaacgggatgtttttc
ggcaaagctaagcagctgtgtccctctctgctgtccgtcccatatgattttgaggcctat
aaagaggtggccctcaccatgtatgagactctggccgggtacacccatgacatcgaagct
ctgagctgtgatgaactgttgatagacggttctgctctgctagctgagctgagcatcaac
ccagaagatctggccagtgcgatcagagcagacatcaaggagaaaacaggatgctgtgct
tcagtgggcatggggtccaacatcctgttggctcggcttgcgacccgaaaggccaagcca
gatgggcaatacatcctaaagtctgaagaagttgatgattttatcagggacctgccagtg
accagcttaccaggtgttggccctgttatgggcagaaaacttgctgctatgggtgtgagg
tcatgtggggacctccagcaggtgtctctgtctcagctgcaaaagaagtttggaccccgg
accggacaaaccctgttccgtttcagcaggggcctcgatgaccgacctgttcgctacgag
aaggaaaggaagtccgtctcagctgagatgaactacaacattcgctttaccagggttgac
gaggcagagtctttcttgactaacttgtccatggaggtgcaaaagcgtttacaagaagca
gggctgcggggtcgcagagttaccttcaaggtcatggttcgcaaggtcggagcgccgctg
gaaccggctaaatacggcggtcatggcatatgtgataacctagccaggactgtgatgctt
gctcagtccactgacagtggtaagctgattgccgctgcagtcatcaagctgttccatgcc
atgaagttgcaggttcaggacatgagaggagtcggcattcaggttcagcttcttgacgga
catcagtctgtccatcaggactccgctggccccgggacgcgctccatcaaagagatgttg
cttgaccggggatcaagtgcgagatccagcaacagaggtttgtgtaaagtctttgtgttt
cagtttagatctttgttgtcgtctgcaaaatcaatagagttcatgatcgatgttacagac
gctgctgacaacaacgcacatcgggaaaacgtttcctcaaccacaggcccatcatctgtc
tcctctccacatcctctgtcctctcccgagccggtcccggggacaagcagagaccagcag
gcatgcacacaaacccctaaacattctcgagcacgtctcaactacagtattgaggtcccc
tccccttcacaggtggatcgttctgtgctggaggcgctgcctgcagatctgagagaacaa
gtggagcggtcgtggaatgatcgtgatgggagacaaagtaaccatcagtcgcccggtcca
cagcactctgatcctcttccacagcctccctctctgaagtctcgtcctgcctcccctccc
cgtcctcccgcccctggtcctgcactgtacgctccacctgttggcacgttgcttctacag
attccaaaccagccagacagtccgggaattatactggagctaccaaacttctcacaggtg
gatccagacgtatttgctgcccttcccaaagagctccaggacgagctgaaatctgcctac
aaccgcgtaacaaatgtccagcctcaggcaaaaatattggagcagaagaatccactgttg
cagctgaaacagtcaggactcggagtcggcattggtcgagtgaagcggcactacaagaga
aagaatgccgtgagccccgttaaaaaagctccttcacctctgaagaggcgtaacacgacg
aacagcccaggcaaagcgctaccacctcctataagatcacgagaaccaatgaacatatta
aaagctgaaaatggtccctccacatcaaccacaaaaccagacatcccagagcctctgtcc
aaattcatccctcgccccgctccggtgttggccggagcctatgacttgacggacattaaa
acacttctacgggaatgggtcaccaccataacagaaccgatggaggaggacatcctgcag
gtggtgaaatactgcactgatctgattgaggataaggatctggagaagttggatttaatt
ataaaatatatgaaaaggctcatgcagcagtcggtggagtctgtttggagcatggctttc
gacttcatcctagacaacgtgcaggtggttgtgcagcaggcttatggtagcaccctgaaa
gtagcatga

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