KEGG   Anoplopoma fimbria (sablefish): 129104845
Entry
129104845         CDS       T09102                                 
Symbol
parp4
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03410  Base excision repair
afb04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    129104845 (parp4)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    129104845 (parp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:afb03400]
    129104845 (parp4)
DNA repair and recombination proteins [BR:afb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     129104845 (parp4)
SSDB
Motif
Pfam: PARP4_MVP-ID VIT PARP VWA_3 VIT_2 BRCT_2 WGR-like_PARP4 VWA BRCT VWA_2 VWA_CoxE PARP_reg MutS_I
Other DBs
NCBI-GeneID: 129104845
NCBI-ProteinID: XP_054471678
LinkDB
Position
16
AA seq 1859 aa
MAVFENCTMLLELKTLPFKEKNKLKSAVTENGGSLSYVVNKQCSLIVTSDVADLSSNRLR
GIQKNQTPVVGVDYVYSCLERGVLLPVDDYKLDTSSHSPSAFSLPLPPSLQIIIPPSHKV
NTVPAAEPTKGPAEPVDSVGRSGRAGAPKRSENILDELRIYTETDSDLPKYPDNFQVAKY
SIFEKINSNTWCLLELQSHKGETGWQYRVVKYWKDNILTKKAAVRAMLLFPSTSEEALEV
YKVLRETLQANGLQLRTDTPPQAPHLGSAPLQQLLLEEKLNTGSLSQEVGVFVELLWTEA
LGRLGNILRVPINKLSLNDVSRVEGLLLQAQRKLREANHSEVASLLSEVYTLLPHVEPLQ
YPATAKLISQKLDLCQLIRDVLNVSEMTLRSPVPSSLGKYRALRCSIDRVPPNTSEFKAV
TALLTDSRVQVRQVLCVSRGVELQTFKSEVGNVKPLLHCSSPSNFVGVLSRGLLLPRVGV
EHHGIERTDIGNLGSGIYFSDAVSTSLKYSKPSETDGSRLLLVCEVALGRCRDFLKRDVT
LTEAPEGHHSTHGVRRTPNTHSEFEDDEYVVYSPDQVKLKYVVQFSIEGDQVKEFSPAID
TSAEPALPSSDQGMELMCEDDEAESIKNPLEDVKAGLLDSSGQQLPLQAVHVKCKLMDLL
SQVIIFQKYTNLSSVPIEAKYVFPLDDSAAVCGFEAFINGKHVVGQVKEKETARKEYKQA
IEKGHGAYLMDQDAPDVFTISVGNLPPGATVLIKVTFVSELIIRDGSILFSLPGSVAPWQ
ESAALNQTTQVTVEKVCVTDEAREFTLDMSVEMPNKITNLKCITHKVKIKRTDCKAVVSV
LPGEVMGQDGFQLSITLSEVHLPRMWVEKHPDKDSQASMLVFYPDFEVDSASASDEVVLL
VDTSESMKGESLRTAQRIARQVLKTIDHNIRLNVLFFGTDHTEAFLTAQPLVESRPAAES
FIKLTPPVGGSTELWRPLRALSLLPPSRGVRNLLLLSDGHVQNAELTLKLLRDNAQHSRL
FTCGLSPTANRHMLRALAQAGGGAFEFFDTKTKHNWAEKVERQVKRMSSPGCSSVSVKWQ
QFNPTALLPVQAPKQLHALFNDCHTLVYGFVPHCTQATLLGNLSGQELKTMVSTSELQKT
KGTFLHKLTARALIRDYEDGSLDSNEAEHEGKKAELKRFIIELSKEFSILSQFTSFVAIE
ERDSEQTEEGFTDIPKLISEEDVDFLPYIGWISPQDSEEKTSMDDDRDYDYSLGAMMEHV
LDEDCALGKPYQLLDDEEDEESAESSSLSLMDDDEGEESAVLESLSMPNEAVLQMKKLSH
YSPTSAVRSHGSYLSRTSMGMPMMTGGHPIRGSLPPSPPPPPRLEQPSDLSFHPPPPPPP
PPPPPPPPLEQPSDLSFHPPPPPPPPPLLEQPSVLFSHPTPPRRTLNALLLRSARSGSEP
KNRASGIQFINQPEICSIAGSAEIPIPFQSMGHIGTALCAARPRSYVSHGRRKGSVFGSV
EMSETTSSLKRMNESETGSSEKDQLVRPPRKEASLDLMPTAKALRSAGSTFNTQQLSGKI
VDQNLMSKFMRVAQDCSIQQAPQILDQQHSGFGFDQCLTQVVSLERDRPMRVDAAIQPSQ
ENRISRRSRKACLRQERPPSESPPAGDVPQSVITEGISIQRRPLRLRVTEAALCRDESGP
LSLPGHRPLSRTASSPEGLQLRWTKIFQMQHSEGYWELTTELGELLNVNVDLFANSYLKN
KGIQSLGVKAHGDILKLVATLLVLQLMRVEELEEGKLLRTLFSLDDSSLPRPARWEEVKR
AADWVIWADRQYPCVYSRLEFGMSWETSTRQLLGFEGLPPFSPLTGLNLQRTVRHLLVH
NT seq 5580 nt   +upstreamnt  +downstreamnt
atggctgtgtttgagaactgcaccatgcttttggagctgaaaactttgcccttcaaggag
aagaacaagctgaaatcagcagtgacggagaatggaggcagcctctcctacgtggtcaat
aagcagtgctctctgatagtgaccagcgatgtggccgacctgagctccaacaggctgcgt
gggatccagaagaaccaaacgcccgtggtcggggtggactacgtgtacagctgtctggag
agaggggttcttctgcctgtggatgattacaagctggatacttcctctcactctccttct
gccttctcacttcctcttcctccctccttacagataataattccaccctcacacaaagtg
aacacagtaccagctgctgagccgaccaaaggcccggccgagcccgtggactctgtgggc
cggagtgggagggcaggggctccaaagaggagtgaaaacatcctggatgagttgagaatt
tacactgaaactgattccgatcttccaaagtatccggataattttcaagtggcaaagtat
tcaatctttgaaaagataaacagcaacacttggtgtttgctggagctgcagagtcacaaa
ggagagacgggatggcagtaccgcgtggtcaagtactggaaggacaacatattaaccaag
aaggcggcggtgagggccatgctgctgtttccgtccacctcagaggaagctctggaggtt
tacaaggtcctgagagagaccctgcaggctaacggtctgcagctgaggaccgacacccct
ccacaggccccccacctgggctctgcccccctccagcagctgctgctggaggagaagctg
aacacaggaagcttatcacaagaagtgggcgtgtttgtagagctgctgtggaccgaggcc
cttggtcgcctcggcaacatcctccgagttccgatcaacaagctcagcctcaatgatgtg
agcagggtggagggcttgctgctccaggctcagaggaagctgagggaggcaaaccattcc
gaggtggcgtctctcctcagtgaggtttacaccctgctgccgcacgtagagccgctccaa
tatcctgccaccgccaaactcatctctcagaaactggacctctgtcagcttatccgagat
gttctgaacgtgagcgagatgaccctgaggagccccgtgccttcctctctggggaagtac
cgcgctctgaggtgcagcatcgacagggttccccccaacacctccgagtttaaggctgtg
accgctctgctgacggacagcagggtgcaggtccgacaggttctgtgtgtcagcagaggg
gtggagcttcagacgtttaagagtgaggtcgggaacgttaagcccctccttcactgctcc
agccccagcaactttgtgggagtcctgtctcgtggtctgctgctgccccgtgttggagtg
gagcatcatgggatagagagaacagacattggtaatctgggcagtggaatctacttcagt
gacgccgttagcaccagtctgaaatactccaagcccagtgagacagacggctctcggctg
ctgctggtgtgtgaagtggcgttgggacgctgcagggactttctcaagagagacgtcact
cttactgaggcccccgagggacaccacagcacccacggggtccgacgcacccccaacact
cactctgagtttgaggacgatgagtacgtggtgtacagtccagaccaggtgaaactgaag
tacgtggttcagttcagcatcgagggagaccaagtgaaggagttcagtccggccatcgac
acctcagctgagccggctctaccctcttcggatcaaggtatggagttgatgtgtgaggat
gacgaggctgaaagcattaaaaaccctctggaggatgtgaaggccggactgttggacagc
tcgggtcaacagctccccctgcaggccgtccacgtgaagtgcaaactgatggatctactt
tctcaggtcatcatcttccaaaaatacaccaacctgagctccgtgcccattgaggcaaag
tacgtcttcccgttggacgactctgcagcagtttgtggatttgaagctttcattaacggg
aaacacgttgtgggacaggtgaaggagaaagagacggctcgcaaggagtacaagcaggct
attgagaaaggccatggagcctacctcatggaccaggacgcccccgatgttttcaccatc
agtgtgggaaacctgccgcccggtgcgacggtcctcattaaagttacctttgtgtctgag
ctgatcatcagggacgggagcattctcttctctctgcccgggagtgtggctccgtggcag
gagagtgcagcgctcaaccaaaccacgcaggtcactgtggagaaggtgtgtgtaactgat
gaggcgagagagtttactctggacatgtcggttgagatgcccaataagatcaccaacctg
aagtgcatcactcacaaagtcaagattaagaggacggactgtaaggcggtggtgagtgtg
ctgccaggagaggtcatgggtcaagatggtttccagctgtcaatcactctgtctgaggtc
cacctgcccaggatgtgggtggagaaacaccctgacaaggacagccaggccagcatgttg
gttttctatccagactttgaagtcgactccgcttcagcatccgatgaagtcgtcctgctg
gtggacacatcggagtccatgaagggagagtccctccgcacggcccagagaatcgcccgg
caggtcctcaaaaccatcgaccacaacatcagactcaatgtcctcttcttcggcacagat
cacacggaagctttcctgacagcacagccgctcgttgaatctcgcccggcagcagagagc
ttcatcaagctcacccctccagtagggggcagcactgagctgtggcggcccctgagagcc
ctcagcctgctgcctccgtcccgtggcgtcaggaacctgctgctgctgtcggacggccac
gtccagaacgcagagctcaccctgaagctgctccgagacaacgctcagcacagccgcctc
ttcacctgcggcctcagcccgacagccaatcggcacatgctgagagccttggcccaggca
gggggcggagcctttgaattcttcgacacaaaaaccaaacacaactgggcagagaaggtg
gagcggcaggtgaagcgtatgtcgtctcccggctgcagctcagtgtcagttaagtggcag
cagttcaacccgacggcgcttcttcctgttcaggcccccaagcagctccatgctctgttc
aacgactgccacaccctggtttacggctttgtgccgcactgcactcaggccaccctgctt
ggaaatctgagtgggcaggagctcaaaaccatggtgtcaaccagcgagctgcagaagacc
aagggcacgtttcttcacaagctcacagcaagggccctcatcagggactacgaagacgga
agcctggatagcaatgaagctgaacatgaggggaagaaagcggagttgaagcgcttcatc
atcgagttgagcaaagagttctccatcctgtctcagttcaccagcttcgtggccatcgag
gaaagggactccgaacaaaccgaggagggcttcacggacatccccaagctgatctccgag
gaagacgtggacttcctcccctacatcggctggatttctcctcaggatagcgaagagaaa
acgtccatggatgatgatcgtgattatgattacagtctaggagctatgatggagcatgtt
ttagatgaagattgtgcactggggaagccttatcaattgctggacgatgaggaagatgaa
gaaagtgctgagtcgagttctttatctttgatggacgatgatgaaggggaagaaagtgct
gtgctggagtctttatctatgccgaacgaagccgttcttcagatgaagaaactatcccat
tattctcccacgagtgcagtgcgcagtcacggaagttaccttagcaggacatcaatgggc
atgcccatgatgacaggaggccaccctattcgagggtcacttcctccttctcctcctcct
cctcctcgtttagaacaaccttcagacctctccttccatcctcctcctcctcctcctcct
cctcctcctcctcctcctcctcctttagaacaaccttcagacctctccttccatcctcct
cctcctcctcctcctcctcctcttttagaacaaccttcagtcctcttctcccatcctact
cctcctcgtcgcactttgaatgctctattacttcgttctgccaggtcaggctctgaacca
aagaatagagcatcagggattcaatttatcaatcaaccagaaatctgtagtatagccggt
tcagcagaaattcccattccattccagagtatgggacatattggaactgccctgtgtgca
gcgaggcctcggtcttatgtctctcatggcaggagaaagggcagtgtttttggctctgtg
gaaatgtctgaaactacaagttctctcaaaaggatgaacgaaagtgagaccggatcctct
gaaaaagatcagttagtacgtccgcccagaaaggaagcgtctctagacttgatgcccact
gctaaagccctgagatccgcaggctccactttcaacactcagcaactgtcgggtaaaatt
gtggatcaaaatctgatgtctaagttcatgcgggttgcacaggactgttcaatccaacaa
gcacctcagattctagatcaacaacattcaggttttggtttcgatcaatgtctcactcaa
gtcgtatcccttgaacgagatcgtccaatgagggttgacgctgcgattcaaccttctcaa
gaaaacagaatttcaagaagatcaagaaaagcttgtttgaggcaagagcggcccccgagt
gagagtccacctgctggagatgtacctcagtctgttataacggaggggatttcaattcaa
cgtcgtccccttcgacttcgggttacagaagcagcactctgcagagatgagtctggtcct
ctgtctttaccaggtcatcgacccttgtcgagaacggcctcatctcctgaagggctgcag
ctcagatggacaaaaatcttccagatgcaacattcagagggctactgggagttaaccaca
gagctgggtgaactcttgaatgtcaatgtcgacctctttgccaactcgtacctgaaaaac
aagggcatccagtctctaggtgtgaaggcccacggagacatcctgaagctggtggcgact
cttctggtcctgcagctgatgagggtggaggagctggaggagggcaaactgctccgcacc
ctcttcagcctggacgactcctctctgcccaggcccgcgcggtgggaggaggtaaagcgg
gcggcggactgggtcatctgggccgaccgtcagtacccgtgcgtctacagccggctggag
tttggcatgagctgggaaacctccacccgtcagctgctgggcttcgagggcctccctcca
ttctcacctctcaccgggttgaacctgcagcgcaccgttcgccatctgctggtccactaa

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