Anoplopoma fimbria (sablefish): 129104872 Help Entry 129104872         CDS       T09102                                  Symbol clasp1a Name (RefSeq) CLIP-associating protein 1a   KO K16578   CLIP-associating protein 1/2 Organism afb  Anoplopoma fimbria (sablefish) Brite KEGG Orthology (KO) [BR:afb00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:afb03036]     129104872 (clasp1a)   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:afb04812]     129104872 (clasp1a) Chromosome and associated proteins [BR:afb03036]  Eukaryotic type   Centrosome formation proteins    Microtubules and associated factors     Microtubule-associated proteins      129104872 (clasp1a) Cytoskeleton proteins [BR:afb04812]  Eukaryotic cytoskeleton proteins   Microtubules    Tubulin-binding proteins     Cytoplasmic linker proteins (CLIPs)      CLIP-associating proteins       129104872 (clasp1a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  CLASP_N HEAT_EF3_N CEP104-like_TOG XMAP215_CLASP_TOG HEAT HEAT_EZ TOR1L1_N Cnd1 HEAT_DAAF5 Sec7-like_HUS MMS19_N ParcG Paxt-1_C TAN INTS1_R4 MMS19_C Motif Other DBs NCBI-GeneID:  129104872 NCBI-ProteinID:  XP_054471708 LinkDB All DBs Position 16:3427156..3510999 Genome browser AA seq 1538 aa AA seqDB search MMEPSMESCLVQVLQKDMGRRLQVGQEIIDYILDKEKSHDLEQDQTALDKMVDGIASSWV NCSNFKVALLGLDLLSALVTRLKERFRAHVGTVLPSLIDRLGDSKDQVRDQDQTVLLKIM EQAASPQYVWDRMLGGFKHKNNRTREGVCLCLIATLSTYGAQGLTLSKIVPHICNLLGDP TSQVRDGAMSCLVEIYRHVGERVRMDLCKKGLPQSRLNVIFSKFDEVQRSGNMMSSSSSD KNFEDEDSVDGGRSSSSSLSSKAPPSGRRPVASVVRRPSSATSTTKPTSKEAAAGAVDEE DFIKTFEDVPSVQIYSNRELEDQLAKIREVLSDDKHDWEHRVVALKKVRSLLLAGATEYE GFPQQLRLLEAPLKLSAKDLRSQVVREACITLGHLSSILGNKFDHGAESIMPTLLNLVPN SAKVMATSGVATIRLILRRTHYPRLIPIITSNCISKSVAVRRRCFEFLDLMLQEWPTNTL ERHVAVLTETIKKGIHDADSEARSIARKCYWGFHGHYSREAEHLFQALESTYQKALQSHL KGSDSIVSLPQSDRSSSSSQESLNRPMSVKSVIGGSITRSKLVGSRLSTTSGSLQRSRSD IDVNAASSAKSRLSTVPASSPFSSVAALPPGSYASLGRVRTRRQSSGSVGGASPSVVDSR GRSRAKVVSQSQPGSRSSSPGKLLGHSSYGRIPRATVSASTTPADKRSRIPRSQGCSRET SPSRLGLASLCGKALPPAALPYRTLARSRIPRPSMSQGCSRDTSRESSRDTSPARGFTPL DRYGLIHQARISASVNAMRVLNTGTEVEAAVADALLLGDSRNKRKPLRRRYESPGMYSDD DANSDASSACSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKS QRILSRVELKRLCEIFTRMFADPHSKVEKVFSMFLETLVDFITVHREDLQDWLFVLLTQL LKKMGADLLGSVQAKVQKALDITRESFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIE SLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQVVLISLFELNTPEFTMLLG ALPKTFQDGATKLLHNHLKNSSNTSSGVGSPSNTIGRTPTRHTPSRTSPLTSPTNCSHGG LSPSMMEYDTENMNSEEIYSSLRGVTEAIQSFSYRSQEDLNEPIRQEGKRDDAAGREGVA SSPGSDARLGLDAVEGGRTALDNKTSLLNTPSPRSFSGPRGREFAPYGYGETICTYDKSA LKEAVFDDDVEQFRDCRRQESGENKMTLPNVFAPAISHDHSDLVADLLKELSNHNERSEE RKGALVELLKITREDSLAVWDEHFKTILLLLLETLGDKDHTIRALALRLLKEILRNQPAR FKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLAGSIHPEQCIKVLCPIVQTADYPINL AAIKMQTKVIERIAKDSLLQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDLK PHLALLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSSHS NT seq 4617 nt NT seq  +upstreamnt  +downstreamnt atgatggagcccagcatggagagctgtctggtccaggtcctacagaaggatatgggccgc cggctgcaggtggggcaggagatcattgattacatcttggacaaggagaagtcccacgac ctggagcaggatcagacggcactggacaagatggtggatggcatcgccagctcctgggtc aactgcagcaacttcaaggtggctctgctcggcttggacctcttatctgccttagtgacg aggttaaaggagcggtttagggcccacgtgggaaccgttctgcccagccttattgatcga ttgggagactctaaagaccaagtgcgagaccaagaccaaacagtgctgctcaagatcatg gaacaagctgccagcccacagtatgtgtgggacaggatgctggggggcttcaagcataag aacaacaggaccagagaaggagtgtgcctttgcctcatagccacgctgagcacatacgga gctcaaggcctgaccctcagtaaaatagttccccacatatgtaacctcctgggggacccc accagtcaggtacgtgacggggctatgagctgcttggtggagatctacagacacgtgggc gagagggtgaggatggatctctgcaaaaagggcctgccccagtcacggttgaatgtaatc ttcagcaaatttgatgaagtccaaagatccgggaacatgatgtcatcctccagttcggat aagaactttgaggatgaggactctgtggatggaggccggtcctcctcctcctccctatca tccaaagctccccccagtggcaggaggcctgtagcgagcgttgtgagaagacccagctca gccacctcgacgaccaagcccacaagtaaagaagcagctgccggggctgttgatgaagag gattttattaaaacctttgaagacgtgccctcagtccagatctactccaacagagagcta gaggaccagctggccaagatcagagaagtgctgtctgatgacaaacacgactgggagcac cgagtggtcgcgctgaagaaggtgcgttctctcctgctggccggggccactgagtacgag ggtttccctcagcagctgcgtctcctggaggctcccctcaagctgtcagctaaagacttg cgctcccaggtggtccgcgaggcctgcatcactctgggacatttgtcatcaatactgggt aacaagtttgaccacggagcggagagcatcatgcccaccctgctgaaccttgtgcccaac agtgccaaagtcatggctacgtccggagtggccaccatccgcctcattcttaggcgcaca cactacccacgtctcatccccatcatcaccagtaactgcatctccaaatcagtagcagtc agacgacgctgttttgagttcttagacctcatgctacaagagtggcccactaatacactg gaaagacatgtggctgttctgactgagaccatcaagaaaggcatacacgatgcagactct gaggccagatccattgcaagaaagtgctattggggtttccatggtcactacagccgggag gcagagcatctgttccaggcgctggagtccacctatcagaaggccctccagtctcacctg aagggctctgacagcatcgtgtctcttccccagtcggaccgctcctcctcgtcctcccag gagagtctgaaccgtccgatgtccgtgaagagcgtcataggagggagcataacaaggagt aagctggtgggctccaggttgtccaccacatcgggttctctccagcgttcccgcagtgac atcgatgtcaacgccgcctccagcgccaagtcacgtctgtccaccgttcctgcctcctcg ccgttcagctctgtggctgccctccccccagggtcctacgcctcgttaggtcgcgttcgt accaggagacagagctcgggcagcgtgggcggagccagtccttctgtggtggacagtagg gggcggagccgagccaaagttgtctctcagtcccagcccggcagccgctccagctcccca ggcaagctgctcggccacagcagctacggccggatccctcgggccacggtgtccgcctcc accacgccggccgacaagcgcagcaggatcccccgcagccagggatgtagccgcgagacc agccccagccgactgggtcttgccagcctgtgtggtaaagctcttcctcctgctgctctt ccctaccgcacgctagcccggagccgtattccccgtcccagcatgagtcagggttgcagt cgcgacaccagtcgcgagagcagccgcgacaccagccccgctcggggcttcactcctctg gatcgatatggtttaattcaccaagcaaggatctcagcgtcagtcaacgccatgagggtc ctaaacactggcactgaggtggaggcagcagttgctgatgctctgctattaggagactcc aggaataagaggaagccgttgaggcggaggtacgagtctcctggcatgtactccgacgac gacgccaacagcgatgcgtccagtgcctgctcggaacgctcgtacggctcgaggaacgga ggcatcccccattacctgaggcagacggaggacgtggcggaggtcctgaaccactgcgcc agctccaactggtcggagaggaaggagggcctgctgggcctgcaaaatctcctcaagagc caaagaatattgagccgagtggagctgaagagactttgtgagatcttcacaaggatgttt gcagatccacatagcaaggtagagaaggtgttcagcatgttcctggagactcttgtggac ttcatcacagtacacagggaagacctgcaggactggctctttgtcctgctcactcagctg ctgaagaagatgggggcagatctgctgggttcagtccaggccaaggtccagaaggctctg gatatcacaagagagtccttcccatttgaccaacagttcaacatcctgatgaggttcatc gtggatcagactcagacgcctaatctgaaggttaaggtggccatcctgaagtacatcgag tccctggctcggcagatggacccgacggacttcgtcaactccagcgagacgcgcctggcc gtatctcgcatcatcacctggaccaccgaacccaaaagttctgatgtcaggaaggcggcc caggtggtgctgatctcgttgtttgagctcaacaccccggagttcaccatgctgttggga gctctccccaaaaccttccaggacggagccaccaaactgctgcacaaccacctgaagaac tccagcaacaccagcagcggtgtggggtctccaagcaacaccattggccggacgccgaca cgccacacccccagcagaaccagccctctcacctctccaacaaactgttcccacggagga ctgtctccaagcatgatggagtacgacaccgagaacatgaactcagaggagatctacagc tcgctgcgcggcgtcacagaggccatccagagcttcagctaccggagccaggaggacctg aatgagccaatcagacaggagggcaagagggacgatgccgcaggaagagagggcgtagct tcctctcctggctctgacgcccgcctcggcctcgacgcggtggaagggggccgcaccgcc ttggacaacaagacctccctactcaacacgccatcacctcgctccttctccgggccgcgg ggccgggagtttgctccttatggctacggagaaaccatctgcacatacgacaagagcgcc ctgaaggaggccgtgttcgacgacgacgtggagcagttcagagactgccgacgtcaggaa agtggtgaaaacaagatgacgctgcccaacgtctttgctcccgcaatcagtcacgaccac tcggacctggtagctgacctgcttaaggaactgtccaatcacaacgagcgctccgaggag cgtaaaggcgccctggtggagctgctgaagatcacacgggaggacagcctggctgtgtgg gatgaacactttaaaaccatcctcctcctcctgctggagacgctgggtgataaagatcac accatccgagccctggccctgcgtctgctcaaagagattctgaggaaccagccggcccgc ttcaaaaactatgctgagctaaccatcatgaagaccctggaggctcacaaagactctcat aaagaggtggtgcgtgcggccgaggaggcggcgtccaccctggccggctccatccacccg gagcagtgcatcaaggtgctgtgtcccattgtgcagacagccgactaccccatcaacctg gctgccatcaagatgcaaaccaaagtcattgaacgcatcgccaaggactccttactgcag ctgctgcctgacatcatcccaggactcctacagggctatgacaacacagagagcagcgtt cgcaaggccagcgtgttctgtctggtggctatctactctgtgattggtgaggatctcaaa ccccacctggcactgctcacgggcagcaagatgaagttactgaacctgtacatcaagcga gcccagacgaccaacagtaatagcagcagctcctcggacgtctcctctcacagttaa

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