Anoplopoma fimbria (sablefish): 129104925
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Entry
129104925 CDS
T09102
Symbol
abcb11a
Name
(RefSeq) bile salt export pump
KO
K05664
ATP-binding cassette, subfamily B (MDR/TAP), member 11
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129104925 (abcb11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
afb02000
]
129104925 (abcb11a)
04147 Exosome [BR:
afb04147
]
129104925 (abcb11a)
Transporters [BR:
afb02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB11 subgroup
129104925 (abcb11a)
Exosome [BR:
afb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129104925 (abcb11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_22
AAA_16
AAA_29
AAA_15
Rad17
AAA_7
Zeta_toxin
AAA_21
WH_GTF3C1_N
Motif
Other DBs
NCBI-GeneID:
129104925
NCBI-ProteinID:
XP_054471765
LinkDB
All DBs
Position
16:13375820..13383417
Genome browser
AA seq
1238 aa
AA seq
DB search
MVFGGLCALIHGAALPLMLLVYSRMTNTFVGYELEVQVLKDENKTCNNNTIYWMDIEAEM
TMFAYYYVGIGLGVMFVSYFQIFFWVTAASRQIDKMRKIYFRKVMQMEIGWFDCNSVGEL
NTRMSDDINKINNAIADQVSIFIERLSTFVFGFMVGFIGGWKLTLVVIAVSPLIGIAAGL
MAMAVARLTGRELTSYAKAGSVADEVLSSIRTVAAFGGEEKEAERYDTKLAEAQIWGVKK
GTIIGIFQGYLWCIIFFCFALAFWYGSKLVIDTKELSPGSLIQVFFGVLMAAMNLGQASP
CLEAFASGRAAAKNIFDTIDREPEIDCFSEEGHKLDRVKGDIEFHNVTFYFPSRPEVKIL
NDLSMQIKAGETTAFVGPSGSGKSTTIQLIQRFYDPKEGMVTLDGHDIRTLNIQWLRSLI
GIVEQEPMLFSTTIADNIRYGRPGVTMEDIIQATKEANAYDFIMDLPQKFDTLVGEGGGQ
LSGGQKQRIAIARALIRNPRILLLDMATSALDNESEAVVQKALEKVCKGRTTISVAHRLS
TIRNADVIIGFEHGQAVEKGTHSDLLERQGVYFTLVTLQNQGTSNTTKDAISEALEEDFD
PKAPICTSSKRGSVRLRSQSKLSNGTLPDNLMIFSDKQFSTENTYEDDPDEFVEPAPVAR
ILKYNQPEWPYMLIGSLGAAVNGSVNPIYAILFSQIIGTFAITDLNEQRKQINGICILFC
IVAVTSFFSQFLQGYAFAKSGELLTRRLRKVGFQAMMRQEIGWFDDPRNSPGALTTRLAT
DASMVQGATGSQIGMIVNSLTSIGASFIIALYFSWKLTLVILCFLPLIGLSGVFQAKMLT
GFANEDKDAMEAAGRVSSEALANIRTIAGLAKENSFVESYEQKLVLPFKSYRKKANIYGL
CFSFSQCVIFMAYAASFRYGGYLVKSEGLHYMLVFRVITAVVISGTALGRASSFTPDYAK
AKIAAARLFKLLDRVPKISISHTDGEKWDNFKGEIEFINCNFTYPTRPDVQVLNGLVVSV
KPGQTLAFVGNSGCGKSTSVQLLERFYDPDGGRVMIDGRPSHTVNVPFLRSQIGIVSQEP
VLFDCSIAENIQYGDNSCSVNMEAIIEAAKKAFLHDFVMTLPDKYETQVGAQGSQLSRGE
KQRIAIARAIVRNPKILLLDEATSALDTESEQTVQSALDEARKGRTCITIAHRLSTIQTA
DIIAVMSNGAVIEQDTHDNLMAKKGAYYKLVTTGAPIS
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atggtatttgggggtttgtgtgccctcatacatggtgcagctttacctctcatgcttctg
gtgtacagcaggatgacaaacacgtttgttgggtatgagcttgaggtccaagtattgaaa
gatgaaaataagacatgcaacaacaacaccatctattggatggatattgaagcagagatg
accatgtttgcatattactatgttgggattggattaggagttatgtttgttagttatttt
cagattttcttctgggtgacagcagcttcaagacaaattgataaaatgagaaagatttat
ttcagaaaagtaatgcaaatggagattggatggtttgactgcaactctgttggtgaactg
aacacaaggatgtcagatgatatcaacaagatcaacaatgccattgctgaccaggtgtct
atcttcattgagaggctctctacgttcgtgtttggcttcatggttggattcattggtgga
tggaagctgactttggtggtcatagcagtgagcccgctgattggaatagctgctggacta
atggcaatggctgtggccaggctgacaggacgagagctaacgtcctatgcaaaggcaggg
tcagtggctgatgaggtcctgtcatccatcaggacagtagcagcgtttggtggggaggaa
aaagaagctgaaagatatgacacaaaacttgcagaagctcagatctggggtgtgaaaaag
ggcacgatcataggcattttccaaggatacctgtggtgcatcattttcttttgcttcgct
ttggccttttggtacggatctaaattggtcatagacaccaaggagctttctcctggctct
cttattcaggtgttctttggagtactcatggcagccatgaacctgggccaggcctcaccc
tgcctggaggccttcgcttctggtcgtgctgcagcgaaaaacatctttgacacaattgac
cgggaaccagaaattgattgtttctcagaagaaggtcacaaattagaccgagtaaaagga
gacattgagttccataatgtcactttctacttcccatcccggcctgaagtcaagatttta
aatgatctgagcatgcagatcaaagcaggagaaaccactgcttttgtgggaccaagtgga
tctggaaagagcaccactatccagctcatccaaaggttttatgacccaaaggaaggaatg
gtgactttggacggccacgacatccgtactttaaacatccagtggctccgatctctcatt
ggtattgtagagcaggagccaatgctgttttctacaaccattgcagacaacatccggtat
ggtcgacctggagtcaccatggaagacatcatccaggcgacaaaagaggctaatgcctat
gattttatcatggatctgccacagaaatttgatactctggtcggagagggtggagggcag
ttgagtggaggacagaagcagaggattgctatcgctcgagctctgatcagaaacccaagg
atcctgctgctagatatggccacatctgcgttagacaatgagagtgaggctgttgtccag
aaggcactggaaaaggtgtgcaagggcaggacaacaatttctgtagcccatcgtctttcc
acgatcagaaatgcagatgtcattattggttttgagcatggacaggctgtggagaaggga
acacacagtgacctactagaaaggcaaggcgtctacttcactcttgtcaccctgcagaat
caaggcacatccaacacaactaaagatgcgatcagtgaagctcttgaagaagactttgat
cctaaagcgcctatctgcacatccagtaaaaggggctccgttcgactacgatctcagagc
aaattgtcaaatggcacattaccagacaacctcatgatcttttcagacaagcagttctca
acagaaaatacatatgaggacgatccagatgaatttgtagagcctgccccagtagcacgt
atcctcaagtacaaccaaccagaatggccctacatgctgattggctcgctgggagcagct
gtcaacggctctgtcaaccccatctatgctatcctgttcagccaaattattgggacgttt
gctattactgacttgaatgaacagaggaaacagatcaacgggatatgtattctgttttgc
attgtggctgtgactagtttcttctcccagtttttacagggatatgcttttgccaagtct
ggagagctgctgacccgccgtctaaggaaagtgggcttccaggctatgatgagacaggag
attggttggtttgatgaccccagaaacagccctggagctttgaccactagactggccact
gatgcatcaatggtgcagggggcaacaggatctcagattggcatgatcgtgaactcattg
accagcattggagcgtctttcatcattgctttatacttcagctggaagttaactttggta
attttgtgcttcctgccactcatcgggctgtccggtgtgttccaagctaaaatgctgaca
ggttttgcaaatgaagataaagacgccatggaagcagcaggtcgggtatccagtgaggct
cttgcaaacatcaggacgattgcaggcttggccaaagagaactcatttgtggaatcatat
gagcagaaacttgttcttccatttaaatcctacaggaagaaagccaacatctacgggctt
tgtttcagtttttcccagtgtgtcatcttcatggcatatgctgcttccttcagatatgga
ggctatctggttaagtctgaggggttgcattacatgttggttttcagagtgattacagct
gtagtcatcagtgggacagcactgggcagagcgtcctccttcactccagattatgccaaa
gccaaaattgctgctgctcggcttttcaaactgttggaccgagttcctaaaatcagcata
agccacacagatggagagaaatgggataacttcaaaggtgaaatagagttcatcaattgc
aacttcacctacccaactcgaccagacgtccaggtgttgaacggcctggttgtgtctgtg
aagcctggtcagactctagcgtttgttgggaacagcggctgtgggaagagcacaagtgtt
caactgttggaaaggttctatgaccctgatggtgggagagtgatgattgatggtcgccca
tctcatacagtcaatgtgcccttcctaagatctcagattggcatagtgtcccaggagcca
gtgttgtttgactgcagcatagcggagaatattcagtatggagataactcatgcagtgtc
aacatggaagcgattattgaggccgctaagaaagccttcctacatgactttgtgatgaca
ctaccagataaatatgagacccaggttggtgcccagggctcccagctgtcaagaggagaa
aaacaacgcatcgccattgcccgggccatcgtcaggaacccaaagatcctgctacttgat
gaagctacctctgccctggacacagagagtgaacagactgtccagtctgctctggatgag
gcgagaaaaggaagaacctgcattaccatcgctcaccgactgtcaacaattcagactgct
gacatcatagcagtgatgtctaatggagccgtcatagagcaagacactcatgataatctc
atggccaagaagggcgcctattataaactggtcacaacaggcgctcctatcagctag
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