Anoplopoma fimbria (sablefish): 129104970
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Entry
129104970 CDS
T09102
Symbol
obsl1b
Name
(RefSeq) obscurin-like protein 1
KO
K19574
obscurin-like protein 1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129104970 (obsl1b)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
129104970 (obsl1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
Ig_5
C2-set_2
Ig_4
Izumo-Ig
Ig_C17orf99
fn3
Motif
Other DBs
NCBI-GeneID:
129104970
NCBI-ProteinID:
XP_054471807
LinkDB
All DBs
Position
16:complement(6993421..7025012)
Genome browser
AA seq
1979 aa
AA seq
DB search
MDVFGGAPRFLAYPRPVVVQSGTDAVLKCQIGGDPRPAVIWERNNEKIDPQGRYRVFEDG
NVYNLIISAVTTEDSGQYICKAKNSIGETYAAATLNVEGEAQEMELREENKPRFLIKPLS
TRAGRGDDAVFSCKLWGNPRPEVIWEKDGRKLNEIFESTHFSVGFQDGGWFQLKIFKTRA
PDGGVYTCKARNEFGEALAGAVLLVDAGPGHEDEANRNGYTNGQWKAHQGKQRSGRQVPN
RLKDDSMTKSTKVKMFAVTEGKHAKFRCFVTGKPKPEIIWRKDGRLILSGRRYLLYEDRE
GYFTLKVLYCKQKDNGVYVCAACNTAGQTLSAVHLSVKEPPVRFKQPLIDLEVWEQDLAV
LECEVPEDSVPITWYLEDRRLQPGAKYGMEEWGTKRRLTIRDIGVDDDGIYLCEMPDGGR
SIAEVAVKGTILRKLPRKVDVLEGENAAFCVEVEKEEMDIHWYRDAVELRETHQTILKSF
GRTHILVFVNTMPLDSGLVTFLVGRSKTSSQLRVKAARHCPPSCPVGVQINTERANAALL
SWVPAQDTRKNPPSGYVLERQEVGTGSQEWLQCLTTDSATSVEILGDSVPCEADYRFRIC
SVNKYGKSNNVEFPKAVHLVPVARIQAPLQDALVPEGQDALFSIELSASVIGTWFLSGIQ
LQEDERYSMRRSRTHQSLRIRGVCETDNGAEITFIAYGIRDSAALYIQAPLVKFSPMSEM
DRNKFVEVGNPIVLYCELSDPAAPVHWYKNGVELQTLEGLHIQSEGTMRRIVIQSAEFSH
SGVYCCDAIDDVIRFNVEVEAPPVKFSAIPEEMRTRSIEAGCPIVLQCVVSDPEAHVCWY
KDDMQLISNSGLEIQSEGNTKTLVVQSAELCHSGVYRCSTQDDTMEFQVEIKEPPVLIVY
PKEDVHLDRHVPEEIILSCELSRPNGVVSWYKDGQKLQESENIKLKIEGPYRRLKIISSG
VEDSGEYVCDTADASIFFHLSITEPPVRIVSPSQSQMELCQQTSERMVLSCEISRPNAVV
RWYRDGLEVEENDNLILEVDGVYRRLIIPETTVKDSAEYVCDTADDSMTFFVNIAEPPVR
FVRPRKMTGRVDKVAGETLVLDCEVSRSNAEVTWKKNGEEVEDSRNITILEDGVMRQLTV
HSLTMEDAGQYICDAKDDVMDFHVKVQELPVKILGKTDAKTEKQFLASDDIILVCELSRS
NASVSWYKDNQLIDDTERYCSEEQGVFRSLVVLNAGLQDSGEYTCDAVDDKMVFYITVKE
PQVQIIGNSGQPEHHILVAGDDLILECEVSRPNAIVQWLWNGQILKPDTRIKVDSYDVVR
KLVLSGLRPSDSGKYICDAIDDKLTTIVEVQAPRVVEFIAELRNITVREGEDAVFKCVVS
PEDTRLVWRLNGKQVAPTKRTVISSNGLCHMLCIHNCMVSDSGRVTADAEGSVSEAELQI
QEQQVLFTKKMTPVVAEEYSEATLEVEVSLDSGEVQWMRQGVLIHPGAKNTVKHEGRKHS
LTIHKLAISDRGTYSCETLHDRTQAQLTVEPRKITIKRGLTDIKTTERETASFEVELSHP
NVTGTWMRNTIKLKPTNHFRMSAKGQVHSLTISNLSVEDTGTFTFCVENLKTSARLIVKE
PQVTIFRKLEDQKFPEGAVISIECELSRHNVVVKWLKNGVEVKPGKDSRIYAMGRKRFLQ
IMKCNVSDSGMYTCDAGDVTTCCTVEVYERELQILQGLKDVDIQEDQNAVFVCEISVEDM
PGEWYKNGERIQPTSTIKIRQEGTKHFLLMCNVKAEDSGEIKFVSRHVESVASLEVEELP
VNIVKPLQDTTAFEKSRVLLDCTVSNPRCSIRWYKGINVILPSERFEICSEGCYRKLILQ
QVVLDDEGTYSVQVGEHSCAAKLTVEAQSLLMVRELKDVEVRAPDEACFECEVSDPVLKA
PVWTLNGEPLQPSSRVLLEKIGQIHRLTLRQTSPDMSGEVEFTSGKTNSRAQFRVRGDP
NT seq
5940 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgtttggtggtgcaccacgtttcttggcatatccaagacctgtggtggtgcaa
agtggaactgatgcagtcctaaagtgtcaaattggtggtgatccaaggcctgcagttatc
tgggagcgaaacaatgaaaagattgacccacagggacgatacagggtctttgaggatgga
aacgtttacaatctcatcatttcggctgtgaccacagaggatagtggccaatacatatgc
aaagcaaagaacagcattggggaaacatacgcagcggccacactgaacgtggaaggcgaa
gcacaagagatggagttacgggaggaaaataagccacggttcctcatcaagcccctctcc
actcgcgccggtcgtggggatgatgcggtcttctcttgtaagctctggggaaacccacga
ccggaggtcatctgggaaaaggacggcaggaaactcaatgaaatattcgaaagcacgcac
ttcagtgtgggcttccaggacggtggatggttccagctcaagatctttaagactcgtgct
ccagatggtggtgtgtatacatgcaaagctaggaatgagtttggggaagcgttggcagga
gctgtgttgctggttgatgcaggcccaggacatgaggacgaggcaaaccgcaatggctac
acgaatggccagtggaaagcccaccagggaaaacagaggagtggtaggcaagtgccaaac
cggctcaaagacgactccatgaccaagtctactaaagtgaaaatgttcgcagtgacagag
ggcaaacatgccaaattccgctgctttgtgactgggaaacccaaaccagaaatcatttgg
aggaaagatggcaggctgatactgtctggaaggcgttacttgttatatgaggacagagaa
ggatactttacacttaaagttctgtactgtaagcaaaaggataatggagtttatgtttgt
gctgcgtgcaatactgccggacaaaccctcagtgccgtacacctctccgtaaaggaaccg
cctgtgcggttcaagcagcccctcattgatctagaagtgtgggagcaagatttggctgtt
ctcgagtgtgaagttccagaggactctgttcccatcacatggtatctggaggacagacga
ctgcagccaggggccaaatatggaatggaggagtggggaacaaaacggcgactaactatc
cgtgacatcggagttgacgatgatgggatttacctctgcgagatgcccgacgggggcaga
agcattgcagaggtagctgtgaaagggacaattttgcggaagcttccaagaaaagtggat
gtattggaaggggaaaatgcagccttttgtgttgaagtggaaaaagaagaaatggacata
cattggtacagagatgccgtagagctgcgtgaaacgcatcagactatccttaagtccttt
ggtcgaactcacatcctggttttcgtcaacacaatgcccctagactctggccttgtgact
ttccttgtaggcagatctaagacttcgtctcagctaagagtgaaagcggctagacattgt
cctcccagttgtccagtgggtgtgcagatcaacacagagcgtgctaatgcagctcttctc
tcatgggttcctgctcaggacacaagaaagaaccctccatctggatatgtgcttgagcga
caggaagtgggtacaggctcacaggaatggctacagtgcctgaccactgactctgcaacc
tctgtggagatccttggtgacagcgtgccatgtgaagcagattatcgatttcgcatttgc
agtgtaaacaaatatggaaagagcaacaatgttgagttccctaaagctgttcatttggtt
ccagttgccagaatacaagctcccttacaggatgccttggtgcccgaggggcaagacgcc
ctcttctccatcgagctctctgcttcagttatcggtacatggtttttaagtggtattcag
cttcaggaagatgagcgttattcaatgcgcaggtcacgaacacatcaatctcttcgcatt
cgaggagtttgtgaaacagataatggagccgagatcacgtttattgcctatggcatccgt
gattctgccgcactgtacattcaagctcctcttgtcaagttttcacccatgtcagaaatg
gatcgaaataaatttgtagaagttgggaaccccattgtgctctactgtgagctctcagac
cctgcagctccagtgcactggtacaagaatggggtggagttacaaaccctggagggtctg
catatccaatcagagggcaccatgagaagaattgtcatccaatcagcagagttctcacac
tctggagtgtattgctgtgatgccattgatgacgtcatcaggttcaatgtggaagtagag
gctccacctgtgaagttctcagcaattcctgaagaaatgaggaccaggtcgattgaagca
ggctgccctattgtactccagtgtgtggtgtcggatcctgaggcccacgtttgctggtac
aaggatgatatgcagctcatttcaaactctggtttagaaatccaatcagagggcaacaca
aagacattagttgttcagtctgcagagctgtgccactctggcgtgtacagatgcagcact
caggatgataccatggagtttcaagtggagatcaaagaacctccggtgttgatagtctac
cccaaggaggatgtccaccttgaccgtcatgtccctgaggaaataattctgagctgcgaa
ttgtctcgtccaaatggtgttgtcagctggtacaaagacggtcaaaagctgcaagagagt
gagaacatcaagctcaagattgagggcccttatcgacgactgaagattatttctagtgga
gtggaagattccggagaatacgtctgtgatacagccgacgcttcaatattctttcacctt
agtattacagaacctccggtgcggattgtgtccccaagtcagtcccaaatggagctgtgc
cagcagacctctgagagaatggtactgagctgtgagatctcaaggcccaatgcagtggtg
cgctggtatcgagacggactcgaagtggaggagaatgataaccttatcctagaggtggat
ggggtctacagaagacttattataccagaaactactgtcaaagattccgccgaatatgtc
tgtgataccgctgatgactccatgacattctttgtaaacatagcagagcctcctgttcgt
tttgtacgtccaaggaagatgacaggaagagtagacaaagtggctggggagactctggtt
ctagactgtgaggtttcaagatcaaatgccgaggtgacctggaagaagaacggggaagaa
gtagaagactccagaaatatcaccatccttgaggatggtgtcatgcgtcaattaactgtt
cactcactaacaatggaagatgctgggcaatatatctgcgatgcaaaggatgatgtgatg
gatttccatgttaaagtgcaagagttgcctgtgaagattcttggaaaaaccgatgcaaaa
acggaaaagcagttcttagcatcagatgacattattttagtgtgtgaactttcaagatcc
aatgcctcagtcagctggtacaaagataatcagctaattgatgacactgagcgatactgt
agcgaagagcaaggggttttccgatcactggttgtcctaaatgctgggctacaagattct
ggagagtacacctgtgatgcagtggatgataagatggtcttctacattaccgtcaaagag
cctcaagtacagatcattggaaactcaggccaaccggagcatcacatcctggtagcagga
gatgaccttattttggagtgtgaggtgtctcgtccaaacgccatagttcagtggttatgg
aatggccagatcttgaaaccagacactcgtataaaagttgacagctatgacgttgtgagg
aagcttgttctctctggacttcggccctcagactctggaaaatacatttgtgatgccatc
gatgacaaattgacaacaattgttgaggtccaagctccccgtgttgttgagttcatagcg
gagcttcgtaacatcactgtccgtgaaggagaagatgctgtgtttaagtgtgtggtttca
ccagaggacactcggttggtgtggcgcttaaatggcaagcaagtagctccaactaagcgc
actgtcatttcaagtaacgggctatgccacatgctgtgcatccacaactgcatggtttca
gatagcggcagagtgacagctgatgcagagggttcggtatcagaggcggaactccagatt
caagaacaacaggtgttgttcaccaagaaaatgacaccagttgtagctgaagagtacagt
gaggccactctagaggtggaggtgagtctggattcgggagaggtgcagtggatgaggcaa
ggggtactgatccaccctggggccaagaataccgtgaaacatgagggtcgaaaacacagt
ctcaccatccacaaactggccatttctgaccggggcacctacagctgtgaaactctccat
gaccgcactcaagcccagctcacagtggaacctcgaaaaatcacaatcaaaagagggttg
actgacattaaaactacagagcgagaaacggcatcttttgaggtggagctctcccatccc
aatgtcacaggcacctggatgagaaacacaatcaagcttaaaccaacaaatcacttccgt
atgagtgccaagggacaagtccacagcctaaccatctctaacctatctgtagaagacact
ggcacctttactttctgtgtggagaacttgaagacatctgcaaggcttattgtgaaggag
ccccaagtgaccattttcagaaaactggaggaccagaaattccctgaaggggcagtaatc
tctattgagtgtgagctgtcaagacacaacgttgttgtgaaatggttgaagaatggggtc
gaggtgaagccaggcaaggactcgcgcatttatgcaatgggaaggaaacgctttcttcag
atcatgaaatgtaacgtcagtgattctggcatgtacacctgcgatgccggagatgtgact
acatgctgcactgtggaggtctacgagcgtgagctgcaaatcctgcagggcctcaaagac
gtggacatccaggaagatcagaacgcggtgttcgtttgtgagatctcggtggaggatatg
ccaggagagtggtacaaaaacggggagaggatacaacccaccagcaccatcaagatccgg
caggaagggaccaaacattttcttcttatgtgcaatgtgaaagcagaggactccggagag
ataaagtttgtctccagacatgttgaatctgtcgcttctctggaggtggaagaacttccc
gtcaacattgtgaaacccctgcaagacacaaccgcctttgagaagagccgtgtgctcctc
gactgcaccgtgtccaaccccaggtgtagtatccgctggtacaaaggcatcaatgtcatc
ctgccctccgagcgctttgagatctgcagcgagggctgctatcgcaaactgatcctccag
caggtggtgctggacgatgagggcacgtacagtgtgcaggtcggagagcactcttgcgcc
gccaaactgacagtggaggcccagtcactgttgatggtcagagagctgaaggatgtggag
gtcagagcccctgacgaagcctgctttgaatgtgaggtctcagatcccgtcctcaaagct
cccgtgtggactctgaacggggagcccttacagcccagctctcgggttctcctggagaag
atcggccaaatccacaggctgaccctcagacaaacctcaccagacatgagtggagaggtg
gagttcacctctgggaaaacaaacagcagagcccagttccgggtgaggggtgatccatga
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