Anoplopoma fimbria (sablefish): 129104997
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Entry
129104997 CDS
T09102
Symbol
tspearb
Name
(RefSeq) LOW QUALITY PROTEIN: thrombospondin-type laminin G domain and EAR repeat-containing protein
KO
K24437
thrombospondin-type laminin G domain and EAR repeat-containing protein
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
afb03037
]
129104997 (tspearb)
04990 Domain-containing proteins not elsewhere classified [BR:
afb04990
]
129104997 (tspearb)
Cilium and associated proteins [BR:
afb03037
]
Other cilia and associated proteins
Stereociliary proteins
129104997 (tspearb)
Domain-containing proteins not elsewhere classified [BR:
afb04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
129104997 (tspearb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPTP
Laminin_G_2
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
129104997
NCBI-ProteinID:
XP_054471833
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All DBs
Position
16:complement(25800960..25816131)
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AA seq
665 aa
AA seq
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MLACRCLLLTVVLLAAGVRSQSWRPCTDLQPLDLLSRALPGPGQAPPPQVQMVQSKGSRG
LRLVGAAATALSFPASQIFSNCDYFPAEFSLVATIKIPRLRQKRNEYIFSVVDEGSDSLL
VGLRVSEDRLHFLSTASGVAGRSRLSFKGVGLDDNRWHTVVLAVTGPHATLTVDCGLPLE
LKQVQSFPSALSTRGSRFFIGSRRRLRGRFSGLLRQLVLLPGSDATPRLCPTSDPSLAEL
SVPRVLKSXPLQPDHDGPVYPYEAEARVTLGNPPPCSGPEEGQLWFNAQKKHLFICDGLT
WRTLLQNQERLDYVEDYQDLYTSSETFDVEVFSIPSEGLFMAAANRDSRPGSGIYKWRNG
SFQLYQNISTQEARAWKHFTIGDQIFLVVANSREAEPELSVIYRWNQRRQRFLRHQTLET
HSALDWEAFHIHNHSFLVVANHRRDSNHNIHSVIYRWNPNTKLFEVNQTLSTSGAYDWEF
FSVGPYHFLVVANTFDGQTTTISSTVYVWLDGCFQTFQSIPTVGATDWETFQIDGRFFLA
VANSQRVSNSGPNLYSINSTVYELNRLTQTFIRFQDILTHSAVDWEFFTIGEEKFLVVAN
SHDGSSYSLNSVIYRWQGYEGFVPVHSLPTFGCRDWEYFSTDEGSFLVYSSATSRLSKVF
KLRTY
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgttagcgtgtcgctgcctgctgctcaccgtggtgctgctcgccgccggagtccgaagt
cagagctggagaccctgtacagacctgcagcctctcgacctgctgtccagagccctgccc
ggcccaggacaagccccgcccccacaggtgcagatggttcagtccaaaggctccagaggt
ctccgattggtcggcgccgcggcaacagcgctgagttttcccgcctctcagatcttcagt
aactgtgactacttccctgctgagttctcattggttgccaccatcaagatcccgagactg
agacagaagaggaatgagtacatcttctccgtcgtggacgagggatccgattcgctgctg
gtggggctgcgagtctcagaggaccgcctccacttcctgtccacggcctccggcgtcgct
gggcggagccggctgagctttaagggcgtcggactggacgataaccgctggcacacggtg
gtgctggccgtcaccggaccgcacgccacgctgaccgtcgactgtggacttcctctggag
cttaaacaggtccagtcgttccccagcgctctgagcaccagagggtccaggttcttcatt
ggcagcaggaggaggttgaggggccgcttctctggtttactgcgtcagctggttctactt
cctggttcggatgccacgcccagactgtgcccgacctctgaccccagcctggctgagctg
tcggtcccccgggtcctaaagtccncccctcttcagcccgaccacgatggcccagtgtac
ccgtacgaggcggaggccagagtgactctgggtaatcctcccccgtgttctggaccagaa
gaaggtcagctgtggttcaacgctcagaagaaacacctgttcatctgtgacggacttacc
tggaggactctgctgcagaatcaggagcgtttggactacgtggaggactaccaggatctg
tacaccagctcagaaacctttgacgttgaggtgttctccatcccgtctgaaggtctgttc
atggctgcagccaacagggactctcgtcccggttcaggtatctacaaatggagaaacggg
tcgttccagctctaccagaacatcagcactcaggaggctcgagcctggaaacacttcacc
atcggtgaccagattttcctggtggtggcgaactccagggaggcggagcctgagctgtca
gtcatctaccggtggaatcagcggcggcagcgtttcctccgtcaccaaactctggagact
cactccgctctggactgggaggcctttcacatccacaaccacagcttcctggtggtggcc
aatcacagacgagactccaaccacaacatccacagtgtgatctacaggtggaacccaaac
acaaagctgttcgaggtgaaccagacactgtccacgtccggagcgtatgactgggagttc
ttctcggtgggaccgtaccacttcctggtggtggccaacacctttgacggtcagaccacc
accatcagctccaccgtctacgtctggctggacggctgcttccagaccttccagagcatc
ccgacggtgggagcgacggactgggagacgtttcagatcgacggcaggttctttctcgcc
gtcgccaacagtcagagggtttccaacagcggcccaaatctctacagcatcaactccacc
gtgtacgaactcaaccggctcacacagaccttcatccgcttccaggatatcctcacacac
agtgctgtggactgggagttcttcaccatcggagaggagaagttcttggtcgtagccaac
tctcatgatggcagctcgtactctctgaacagtgtcatctacaggtggcagggttacgag
ggcttcgttccggtccacagtctgccaacgttcggctgcagagattgggaatacttcagc
accgatgaaggctccttcctcgtttactccagcgccacctccaggctcagcaaggtcttc
aaactcaggacctactga
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