Anoplopoma fimbria (sablefish): 129105067
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Entry
129105067 CDS
T09102
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 4 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afb03021
]
129105067 (aff3)
Transcription machinery [BR:
afb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
129105067 (aff3)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
129105067
NCBI-ProteinID:
XP_054471918
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All DBs
Position
16:9367108..9385617
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AA seq
1224 aa
AA seq
DB search
MPTVLAGKGKLSIISFLLRCAYSQVTRSQHNSCAKDILEDMTQQALGGDQAQRILYNSKE
AKLPTAQQRQSRGDVQQRMTRHPRVAPHKSMLADDLKLSSDDEDTQRATHESASWDGHSL
SAQRAHTHSRRVRHSSSDSSGSDSTAESRSSSLYSRSPSRSPDVHPDPVSPANTRPPCNS
KETDHPSAAQWQLDKWLKKSRRKSSGTDQVPSQSIPGRPPSPHTQRAPSPARSWDSNQEY
SPSQSPIPSPQFNFSHSPSHLPSPGYSYCPSPSPFPSTCPSPIPSPGHSPIPSPVPSVCP
SPCGSPRASRSPSPIPRDPPRSPSPGPPTPTRVRHCPEVQRTQPSLTTNPHKTKNRSWIT
PLPNTDTKSKPTNSTHLQPTHQHRPKTRPTQDQDQSKSKASAVLKSNQGHCHKSRPKPNF
HPSSKQLSEAPKHTSHFEQNHSSRSNHNSKHKSRPSIQSSSQHSPKTSKHLVPNSRETNS
GHSLLSQSTPKAATNHNTGLSSRSNPSLKPRAKSSEATAPTPVHVNHTKATQKKPQSKEQ
EVDLRGDHLTQAEGRDHERKADRHRKKQQGKQDRKGDRRLAEEQLLRRPWIHSSAEEEEE
EEEEGVGERQKRREETARGENRRGRDQQLRREWQTVQVKPRVSTNTERHRLEHESHHPGR
TKKGGRSEEERELQQDPSPPPSRSPTPHRPSSSPSVSSSPNSDSESEYQAPITKVPADST
SYKRVPKRGQQSPGRPDASRPKVAHPRGPTSGHPSEGQQSEGKQKLYTLVPYGRGEQTTA
PSQRGLRNLVVQIDLCLLKRVPDSTTSSTVKKHSSSSSPSSTKDKQREAMKHLYVPETVT
KDSKRKRKLENGVSHRESKRSIPHANDLSGNTESTLSAERNFVTETMHNGYLEEYLDSKR
PMSPLSPLSDTPQSTKPLLKTKTSEQHHVHKNRDKNRDSAVKPKMEVECVKVSRQPQPTS
ESWGPAGHRGAVPNNETPHHAEYYLHEAKRMKHRADAMVDKLGKAVNYVDAALSFMECGK
AMEEGPLEAKSPYTMYSETVELIRYAMRLKSHSGPGARQEDKQLAVLCFRCLALLYWQMF
RLKKDHALKYSKVLLDYFKASPKVPSTPPSSSDSGKSTGGPPSSLSPDPKHLGRGSHGGS
AFPSLISIPQRIHQMAANHLNITNSVLYSYEYWEVADNLAKENKEFFNYLNTLSGPLTLH
SSIAHAVQYTRQALQWIRISAKLN
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgcctactgtccttgcgggcaaagggaaactttccattatcagtttcctactcagatgc
gcatattctcaggtaacaagaagccaacacaacagctgtgccaaagatattctggaggac
atgacccagcaagccttagggggtgaccaggcccaacgaatactctacaactctaaggaa
gcaaaactaccgactgcacaacaaaggcaaagtcggggggatgttcagcaacgaatgacc
cgtcaccctcgcgtggcacctcacaaatccatgcttgctgatgacctgaagctgagcagt
gatgatgaagacactcaaagggcaactcatgagtcagcttcctgggatggacacagcctg
tcagcacagcgagcgcacacacatagcaggcgagtgagacattccagctctgactcttcg
ggctcagactccaccgctgagtcgcgcagcagcagcctttactcccggagccccagccgg
agcccagacgttcacccagatcctgtgtcgcccgccaatacacggccaccatgcaacagc
aaggagactgatcacccctctgccgcccagtggcagttggataaatggctgaagaaatcc
cgcagaaaatcttcaggcactgaccaagttccctcccagagcattccaggacgtcctccc
tctccccacacccaaagagccccatctccagccaggtcctgggacagcaatcaggaatac
agccctagccaaagccctattcccagcccacagttcaacttcagccacagccccagccac
ctacctagccctggttatagctactgccctagccccagcccattccccagcacatgccca
agtcccatccctagcccaggacacagccctattcccagtccggttccaagtgtttgcccc
agtccgtgtgggagcccgagagccagccgtagccctagccctatacctagagaccctcca
agaagccccagtccaggcccacctactcccaccagggttcggcactgccctgaggttcag
agaacacaacctagcctaacgaccaatccccacaagacaaaaaataggtcatggattacc
ccattgcctaacaccgacaccaagagcaagcccacaaacagcactcatcttcagccaact
caccagcacaggcccaagactcgacccacacaggaccaagaccaaagcaaatccaaggct
tctgctgttttaaagtctaaccagggtcactgccataaatctagacccaagcctaacttt
catcctagttctaaacagctctctgaggctcccaaacacacatcacattttgaacaaaac
cacagtagcagatccaaccacaactccaaacacaagtccaggccttcaattcaatctagc
tcacaacatagccccaaaacatcgaagcacttagttccaaatagccgtgaaaccaactct
ggtcatagcttgctatcccaatctacccctaaagcggcaactaatcataatactgggttg
agctctagatcaaaccccagccttaaacctagggccaagtcttcggaggctacagcccca
actcctgtgcatgttaatcatactaaagcaacacagaagaaaccccaatccaaggagcag
gaggtagacctcagaggagatcatctgacccaagctgagggcagagatcacgagagaaaa
gcagacagacatcggaaaaaacaacaagggaaacaggatagaaagggagacaggaggctg
gcggaggagcagctactgagacgtccctggatccacagttcagcggaagaagaggaggag
gaggaggaggagggggtaggagagaggcagaaaaggagagaggagacagcaagaggggaa
aacaggagagggagggaccagcaacttagacgtgaatggcaaacagtccaggtcaaaccg
agagtgagtaccaacactgagcgacaccgccttgaacacgagtcacaccatccggggagg
acaaaaaagggagggagaagtgaggaggagagagagttacagcaagacccatcaccccct
ccgtcacgttccccaactcctcacagaccatcctcctcgccctctgtctcctcctctcca
aattcagattcagaatctgaatatcaggctccgatcaccaaagttccagcagactccacc
tcttacaagagagtccccaagagagggcagcaaagtccgggcaggcccgacgccagcagg
ccgaaggttgcgcaccccagaggtcccacctcaggtcatccaagtgaggggcagcagagc
gaggggaagcaaaaactctacaccctggtcccatacgggcgaggtgaacaaactacagcg
ccatcccagcgagggcttagaaatctggtggtgcagatagacctctgtctcctcaaaagg
gtcccggacagcactactagttccactgttaaaaaacactcttcctcttcctccccttca
tctaccaaggacaagcaaagagaggctatgaaacacctgtatgtccctgagactgtgacg
aaagacagcaaacggaaacgcaagttggagaatggtgtgtcacacagagaaagcaagagg
agtattcctcatgcgaatgacctctctggcaacacagagtcaactttgtcagctgagcgc
aactttgtgacagagactatgcacaacgggtacttggaggagtacttggacagcaagaga
ccgatgtctcccctgtctccactgtccgacacccctcagtccaccaagcctctcctcaaa
acaaagacttcagagcagcatcatgtccacaagaacagagacaagaatagagattctgct
gtaaagcccaagatggaggtggaatgtgtaaaagtgtcaagacagccccaaccgacatcc
gagtcctggggccccgcaggacacaggggggccgtgccaaacaatgaaactccgcaccat
gctgagtactacttacatgaagccaaaaggatgaagcaccgtgcagacgcaatggtggat
aagctgggaaaggcggtgaattacgtcgacgccgccctctccttcatggaatgtgggaaa
gcgatggaggaagggccactagaggcaaagtctccttacaccatgtactcagagacagtg
gagctaattaggtacgcaatgaggctgaagagccactctggccctggggcgagacaggaa
gacaaacagctggcggttctgtgtttccgatgccttgccctcctctactggcaaatgttt
cgtttaaagaaggaccatgcactgaaatactccaaagttctgctggactactttaaggct
tctcccaaagtgccttctacacctccctcttcgagtgactctgggaagagcacaggagga
cccccttcgtcactgtcgcccgatcccaaacacctcggacggggttcacacgggggcagc
gccttcccctctctcataagcattccccaacgtatccaccagatggcagcaaatcacctg
aacattaccaacagtgtcctgtacagctacgagtactgggaggtggcagacaacctcgca
aaggagaacaaagagttcttcaactacttgaatactttgtctgggccgttgactcttcac
agcagcatcgctcatgccgtccaatacaccagacaggctcttcagtggatacgcattagt
gccaaacttaactaa
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