Anoplopoma fimbria (sablefish): 129105075
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Entry
129105075 CDS
T09102
Symbol
usp9
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
afb01002
]
129105075 (usp9)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129105075 (usp9)
Enzymes [BR:
afb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129105075 (usp9)
Peptidases and inhibitors [BR:
afb01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
129105075 (usp9)
Ubiquitin system [BR:
afb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129105075 (usp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
Vps23_core
Motif
Other DBs
NCBI-GeneID:
129105075
NCBI-ProteinID:
XP_054471927
LinkDB
All DBs
Position
16:complement(1126256..1167182)
Genome browser
AA seq
2715 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQGQAPDAQSQPPLPQNQTSSPNSSNENSPVSPPDEQGQGDGPP
QLEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKCEACQR
FFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMAT
NPHCKFHIYNGTRPSETVPAGAQLADDELFARPPDPRSPKGWLVDLINKFGTLNGFQMLH
DRFMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLENLTDEELKKEA
KNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEV
NKVISSVSYYTHRHNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKILRF
VIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNA
SKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYS
CSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKMPINIQTNL
VGQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMETMRQFSKEEQAEFDPQTVRPG
SRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLM
GDEPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDD
LELIGLDYLWRVVIQGSDDIASRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRLKA
SYDTLCVLDGDKDSINCARQEAIRMVRVLTVLKEYINECDSDYHEERTILPMSRAFRGKH
ITLIVRFPNQGRQVDDLDIWSHTNDTIGSVRRGILNRIKANAAHTKIELFIGGEVVDPAD
DRKLIGQLNLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESC
LPGVIMSLHLRYISFLWQVADLGCNLNMPLLRDGARVLMKLMPPDNTTVENLRAVCLDHA
KLGENSLSPSLDSRFFGPSPSQVLYLIEVVYALLMPASATLGEDASDFQYNFLKSGGLPL
VLSMLTRNNFLPSADMETRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPNAEGNIPVS
PINQATHDQALVLQSALQNIPNPASECMLRNVAIRLAQQISDEVTENNFFQASKYIPDIC
VIRAVQKIVWASGCGTVQLVFSSNEEISKIYEKTNAAKEPDGEDEQVCCEALEVMTLCFA
LMPTALDTLSKEKAWQTFIIDLLLHCHSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLL
FTVLGSTAKERAKHAGDYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRT
GETGVEETILEGHLGVTKELLAFQTPEKKYYIGCEKGGANLIKELIDDFIFPASNVYLQY
MKSGEFPTEQAIPVCSTPASINAGFELLVALAVGCVRNLKQIVDTLTDMYYLGCETLTEW
EYLPPVGPRPNKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGTDVDDDMSGD
EKQENESNVDPRDEVFSYHHQFDDKPSSKSEDRKEYNIGVLRHLQVIFGHLAASRLQYYV
PRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKI
CQGCPHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKR
LLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVNPE
NQVIQQNEPSEPTPPGSSKYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDG
DVTECKMDDEEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDSLDKDS
ELVKYISELTISSTKPNQVKMPGVIECSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNSV
YLNPPPGQDHLLPEAEEIAMISAQLAARFLFSTGFHTKKVVRGPASDWYDALCILLRHSK
NVRYWFAHKVLFAYPNRFSEYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSPTASPGP
STQGCDNLSLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLNVP
ATFMLVALDEGPGPPIKYQYAELGKLYTVVSQLVRCCDVSARMQSSINGNPPLPNPYGDT
NLTAPVMPVQQLVAEILFVRTSYVKKIIEDCSNSEETVKLLRFSCWENPQFSSTVLSELL
WQVAYSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQK
RAYQCIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNW
SPPVQSNETSNGYFLERSHSARMTLAKACELCPEELKCTQGSPGKEPDEQEAPDDQDSSP
PEDTSLYPHSPGTAQFQQNNHPHGQPYTGPAAQHMNNPQRPGPASAPTPGPAQTTPTPGP
GPTPGPGPRAQENWESTEEVARPQPRPWPRPPPQSPPPPPPPPPQRLPRLRSNVPPSPPL
LCLEPPSSRSPSSHPSVNRAPCRAPLSLSRSPSLSFSLSGPRAGQSQGSHPLYGAPLPRW
PPGGALSWPGACLAA
NT seq
8148 nt
NT seq
+upstream
nt +downstream
nt
atgacagccaccacgcgtggctctccggtggggggcaatgacagtcagggccaaggccag
gcacctgatgctcaaagccaacccccactgccacaaaaccagacatcatctcctaactca
tctaatgagaactctccagtgagcccaccggatgagcagggccagggggatggcccccct
cagctggaagaggaggagcccgccttccctcacactgacctagccaagctggatgatatg
atcaacaggcctcgttgggtcgttccagttttgccaaaaggagagttagaagtccttttg
gaagctgctattgacctgagtaaaaaaggactggatgtgaagtgtgaggcgtgtcagaga
tttttccgagatggtctgaccatctccttcacaaagatcctgacagacgaggcggtcagt
ggctggaagtttgagattcataggtgtatcatcaataacacacaccggttggtggagctg
tgtgtggccaagctctctcaggactggttccctctactggagctactggccatggccacc
aaccctcactgcaagttccacatctacaacggcacacggccctctgagactgtccctgct
ggagcacagctggccgacgatgagctcttcgcccgaccaccggaccctcgctctcctaag
ggctggttggtggacttaataaacaaatttggcacgttaaacgggtttcaaatgttgcac
gatcgcttcatgagcggccaagcactgaacgtccagatcatcgctgcacttatcaagcct
tttggccagtgttacgagttcctaacattgcacacggtaaagaagtacttccttccagtc
atcgagatggttccccagtttctagagaaccttacagatgaggagctgaagaaagaggcc
aagaatgaagccaaaaacgacgcactgtccatgataatcaagtctctgaagaatctggct
tctcgtgtaccagggcaggaggagaccgtgaagaatttagagatttttagattaaaaatg
attcttaggttattgcaaatttcttcttttaacggcaaaatgaatgcactaaatgaagtt
aacaaggtgatctccagtgtgtcctactacactcatcggcataaccctgaagaggaggag
tggctgactgcagagcgcatggcggagtggatccagcagaaccacatcctgtccattgtg
ctgagggacagtttgcaccagccgcagtacgtagagaaactggaaaagatccttcgcttc
gttatcaaagaaaaagctcttacaatgcaggatctggacaacatctgggcggcacaggct
ggtaagcatgaggccattgtgaagaacgtccacgacctcctggccaagctggcatgggac
ttctcgcctgagcagctcgatcacctttttgactgtttcaaggcaagctggaccaacgcc
agcaagaagcagcgtgaaaaactgctggaactaatccgacgcttggccgaggacgataag
gatggggtgatggcccacaaggtcctcaacctgctgtggaacctggcacacagcgatgat
gtgcctgtagacatcatggaccaggcgcttagtgctcacatcaaaatattagattacagt
tgttcacaggacagagacacacagaagattcagtggatagatcgcttcatagaggagcta
cgaaccaatgacaaatgggtgatccctgccctgaagcaaatcagagaaatctgtagcctc
tttggagaagcccctcaaaaccttagaaagaaaatgccaattaacatacaaacgaactta
gtgggtcaaactcagagaagtcctcatgtgttttaccgccatgacctgatcaaccagctg
cagcataaccacgctctggtcaccctggtggccgagaacctctcggcctacatggagacc
atgaggcagttctccaaagaagaacaggctgagtttgacccacagacggtcagaccagga
agccgctacagccatgtgcaggaagtacaggaacgactcaacttcctgaggttccttcta
aaagacggtcagctgtggctgtgtgcacctcaggccaagcagatctggaagtgtctggct
gagaacgcagtgtttctctgtgaccgggaggcctgcttcaaatggtactccaagctgatg
ggtgatgaaccagacctggacccagacattaataaggacttctttgagaacaacgttctg
cagttggacccgtccctgctgacggagaatggcatgaaatgctttgagaggttcttcaag
gctgtcaactgcagggagggcaagctggtggcaaagcgcagggcctacatgatggatgac
ctggaactaataggcttggactacctctggagggtggtaattcaaggaagcgatgacatc
gccagccgagccatagatctgctgaaagaaatctacaccaacctaggacccaaactacaa
gtcaatcaggttgaaattcatgaagacttcatccagtcatgttttgaccgtctgaaagcg
tcctatgacacgctgtgtgtgttagatggagacaaagacagcatcaactgtgcccgtcag
gaggctatccgcatggtgcgagttctcaccgtactcaaagagtacatcaatgagtgtgac
agtgattaccatgaggagaggactatactgcctatgtcaagagccttccgtgggaagcat
atcactttgatcgtccgtttccccaaccaggggcgtcaggtggatgacttggacatttgg
tcacacaccaatgacacaattggctcggttcggcgtggcatcctcaacaggatcaaagcc
aacgcagcacacaccaagattgagctcttcattggtggggaggttgttgatccagctgac
gacaggaagctgattgggcagctcaatttgaaagacaaaacgttgattacggccaagctg
acccaggtgagtgccaacatgccttcaagcccagacagctcatctgactcatccactggt
tcccctggtaaccacggcaaccactacagcgatggccctaaccctgaggtggagagctgt
cttcctggtgtgattatgtcgctgcatctgcgctacatctccttcctgtggcaggtggct
gacctgggctgcaacctcaacatgccactgctcagagatggagctcgagtcctcatgaaa
ctcatgcccccagataacactactgtggagaatctgcgagctgtgtgtctggaccacgcc
aagctcggtgagaacagcctcagcccctcgctggactcgcgcttcttcggcccttcaccc
tcacaagtgctctacctcattgaggttgtttatgctttgctgatgccagccagtgccact
ctgggcgaggacgccagcgacttccagtacaacttcttgaagagcggtgggctgcccttg
gtgttgagcatgctcaccaggaacaacttcctcccatctgcggacatggagacgcgccgc
ggtgcttacctcaatgcgcttaagatcgccaagctcctccttaccgctgttggcttcggg
catgtgaaggctgtggcagaggcctgccagcccaacgctgagggaaatattcctgtctca
ccgatcaatcaggccactcatgaccaggccctggtcctccagagtgccctgcaaaacatc
cctaacccggcctcagaatgcatgctgcgcaatgtagccatccgcctagcccagcagatc
tctgatgaggtcacagaaaataatttcttccaggcatcgaagtacatcccagacatctgt
gtgatccgagcggtacagaaaatcgtgtgggcatcaggctgtggcacagtgcagctcgtc
ttcagctcaaatgaagaaatcagcaagatatacgagaaaacaaatgcagctaaggagccc
gatggggaggatgagcaggtgtgttgcgaggccctggaggtgatgacactgtgttttgcc
ctcatgcccacggctctggacacactcagtaaggagaaggcttggcagaccttcatcatt
gacttgctgctacactgccacagcaaatctgtgcgtcaaatggcccaggagcagtttttc
cttatggcaactaggtgctgtatgggccatagacctctcctcttctttatcaccctcctc
ttcaccgtgctggggagtaccgccaaggagcgcgccaagcacgctggagactacttcact
ttactgagacaccttctgaactatgcctataacagcaacatcaacctgccaaacgctgag
gtgctgctcaacaacgagatcgactggctgaaacggataagggatgaggttaagaggaca
ggggagaccggtgtggaggagacaatcctggagggacaccttggggttaccaaagagctt
ctagccttccagacaccagagaagaagtattacatcggctgtgaaaaaggaggagcgaat
ctcatcaaggagctgatcgacgacttcatcttcccagcatctaatgtgtacctgcagtac
atgaagagtggggagttccccacggagcaggccatcccagtgtgcagcacccccgcttcc
atcaacgccggctttgagctccttgtagcactggctgtcggatgtgtccgcaatctcaag
caaatagtcgacaccctgactgacatgtactacttaggttgcgagacactgacagaatgg
gagtatctgccaccggtggggccgcggcccaacaaaggcttcgtaggtttgaagaacgcc
ggagccacctgttatatgaactctgtcattcagcagctgtacatgatccctccaatccgc
aatggcatcctggccattgagggcacaggcactgatgtggatgatgacatgtcgggggat
gagaagcaagagaatgagagtaacgtggatcctcgtgatgaggtgttcagctaccaccat
cagtttgacgataaaccctccagtaaatcagaggacagaaaagagtacaacatcggggta
ctacgtcacctgcaggtcatttttggacacctggctgcgtctagacttcagtactatgtc
ccaaggggattctggaaacagttcaggttatggggtgagccagtgaacttgcgggagcag
catgacgctctagagtttttcaactctttggtggacagtctggacgaagctctgaaagcc
ctgggccaccccgccatgctgagcaaggtgctgggagggtccttcgccgaccagaagatc
tgtcagggatgcccccataggtatgagtgcgaggagtcgttcacaacactcaatgtggac
atcagaaaccaccagaacctgttggactccatggagcagtatgttaaaggagatcttctg
gagggagccaacgcctaccactgtgagaagtgtaataagaaggtggacacagtgaagcgc
ctgctgattaagaagctgccgcccgtcctggccatccagctgaagcgctttgactacgac
tgggagagggagtgcgccatcaagttcaatgactactttgagttccccagggagctggac
atggagccgtacacggtagccggtgtggcgaagctcgagggcgatgacgtcaacccggag
aaccaggtgatccaacagaacgagccctccgagcccacacctcccggcagctccaagtac
cgtctggtgggagtgctggtccactcaggccaggccagtggcggacactactattcctac
ataatccagaggaacgggggcgacggcgagaagaaccgctggtacaagtttgacgacggc
gacgtgactgagtgcaagatggatgatgaggaggagatgaagaaccagtgctttgggggg
gaatacatgggagaggtgttcgatcatatgatgaagaggatgtcgtaccggaggcagaag
cgctggtggaatgcctacatcctattctatgagcgtatggactcactggacaaggacagc
gagcttgtcaaatacatctcggagttgaccatctcctccaccaagcccaatcaggtcaag
atgcctggtgtcatcgagtgcagcgtccgcaagcagaacgtccaattcatgcacaaccgg
atgcaatacagcctggaatatttccagttcattaagaaacttctgacctgtaacagtgtc
tatttaaaccctcctccaggacaagaccatcttctgccagaggcagaggagattgctatg
ataagtgctcagctggctgctaggttcctcttcagcacaggttttcacaccaagaaagta
gtacggggtcctgccagcgactggtatgacgccctctgcatcctgctgagacacagtaag
aatgtacgctattggtttgcacacaaggttctgtttgcttaccccaaccggttctcggag
tacctgctcgagtgcccgagtgccgaggtccgcggcgcatttgccaagcttatagtcttc
atcgctcacttctccctgcaagacgggccgtgcccctcccccaccgcctcgcccggaccc
tccactcagggctgtgataacctcagtctaagtgaccacctgttgagggccgtactcaac
ctgctcagaagagaggtatctgaacacggccgtcacctgcagcagtacttcaacctcttt
gtcatgtatgccaatctggggctggcagaaaagacccagctgttgaagctgaacgtccct
gctactttcatgttggtggctctggacgagggtcccggccctcccattaagtaccagtac
gctgagctgggcaagctctacactgtggtctcccagctggtccgttgctgtgacgtctcc
gcacgcatgcagtcctccatcaatggtaaccctcctctccccaacccgtatggtgacacc
aacttgacggccccagtgatgccggtgcagcagctggtggcggagatcttgtttgtgagg
accagctacgtgaagaagatcatcgaggactgcagcaactctgaggagaccgtgaagctg
ctccgcttcagctgctgggagaaccctcagttctcctccactgtgctcagtgagctgctc
tggcaggtggcgtactcctacacctatgagctgaggccttacctggacttgctgctgcag
atcctgctcatcgaggactcctggcagacacacaggatccacaatgtgctgaagggcatt
cccgatgacagagatgggctatttgacaccatccagcgctccaagaaccactaccagaaa
cgggcctaccagtgcatcaagtgcatggtggccctctttagcaactgctccgtggcctac
cagatcctgcagagcaatggtgatcttaaacggaagtggacgtgggcggtggagtggtta
ggggacgagctggagaggaggccgtacacagggaacccccagtacacctacaacaactgg
tcccctccagttcagagcaacgagacctccaacggctacttcctggagcgttcgcacagc
gcacgtatgacacttgccaaggcctgtgaactttgtcccgaagagctcaagtgtactcag
ggaagcccagggaaggagccggatgaacaggaagcacctgatgatcaagactcctcccca
cccgaggacacctctctgtacccgcactctcctggaaccgctcagtttcagcagaacaac
cacccccatgggcagccgtacaccgggcccgctgctcagcacatgaacaaccctcagcgt
cccggtcctgcctccgccccgactccgggccccgcccagaccaccccaaccccaggccct
ggtcccactcccggcccaggcccgcgagcacaagagaactgggagagcaccgaggaggtc
gcccggccccagccccggccctggccccggcccccgcctcagtccccaccacctccacca
ccaccaccaccccagcgcctgccccgcctaaggagtaacgtcccaccctcgccccctctg
ctgtgcctcgagcctccatcgtcccgctctccttcctctcatccttcggtcaacagagct
ccttgtcgggctcctctttctctctctcgctctccctctctctctttctctctctctggc
cccagggcagggcagagccagggctcccatcccctctacggggcacctctcccccgttgg
cctccgggcggcgctctctcctggcctggggcttgcctggcggcgtga
DBGET
integrated database retrieval system
