KEGG   Anoplopoma fimbria (sablefish): 129105085
Entry
129105085         CDS       T09102                                 
Symbol
pcdh8
Name
(RefSeq) protocadherin-8
  KO
K16499  protocadherin delta 2
Organism
afb  Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:afb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:afb04515]
    129105085 (pcdh8)
Cell adhesion molecules [BR:afb04515]
 Cadherins
  Protocadherins
   129105085 (pcdh8)
SSDB
Motif
Pfam: Cadherin Cadherin_2
Other DBs
NCBI-GeneID: 129105085
NCBI-ProteinID: XP_054471945
LinkDB
Position
16:11644287..11647722
AA seq 970 aa
MGFCKMAGLGLCMLLSLFVYSAQCTTTRYVTYEEDAPGTEIGNLSQDLKIDPADDPDTSF
RFMQENNSSAIDMREMDGLLSVSETIDREQLCPRSPRCFISFDVVAFSKEKFQLIHVEIE
VKDINDHSPHFLRNETHLEIVENVPLDSRFPLQIALDQDVGENYIQSYNISASSHFAVEV
RNRDDGVKFAELVLVRELDREVEDCFTIQVTATDGGVPAKSGSMVVTISVLDFNDNSPTF
EHSSLKVELNEDSPVGHRVLKVHAFDPDGGLNGEVTYAFADGLSAEAGRLFHVDPYSGDV
TLKALVDFEKRRSYELNIKASDSGTNSVPSSCKVVIEIVDVNDNAPEISIKPMTSSSDGV
AYITEAAATESFVALISTSDRDSGSNGYVRISLLGHEHFTLQQAYGDSFMIITSTTLDRE
KIPEYNLTVIAEDLGSPPFKTVRQYTIRVTDENDNPPLFSKSLFEVSVLENNIPGSYVTT
VVARDPDVGKNAKVSYKLIDSEVPGGSSMSTYVSVDSLSGSLYTLRSFDYETLQQIELVI
QAEDRGSPSLSSTSTIRIKVVDLNDNYPYFTFPVLVNDSADIPLPFNAPTGYLALRVSAE
DEDEGVNGELYYQIVQGDPQLFTMNKDTGEIALKQWLTSEIGDVLEMKVAVSDNGRSPLA
SSATIRFVVSDTQPSEDQVVIVLRSSDEEGSGLDGSLIVIIMLSGGCALLLIAIMVVVVT
CKLSRGGRSRGSKREVHHSLFDGGPMPMLCSTEPNIYTGQQGFFHERTSSSLADSCLYEE
RSGDSETKMFLPSKHFQATSVWQGDKFCLQVSGIGNSDQLSVKDSGKGDSDFNDSDSDIS
GDGGKKNFSTFQPRLKSSSSTANSLSGDCQSMYSAVPPQSFRGPRDNAYTIGFSPVPVFN
NPHGYPHFWKDSGYGTNRQKLRSSMQTWTGTLPSYFHEQQREAGVEGLEIHNQSPSIVTV
ATESEVATIF
NT seq 2913 nt   +upstreamnt  +downstreamnt
atgggattttgcaagatggcaggacttgggctgtgcatgttgctttctttatttgtatac
tctgctcagtgtacaactacaaggtatgtcacctacgaagaggatgcacccggaacggag
ataggcaatctgtcccaagatttaaagattgatccagctgatgaccccgacacatcgttc
cgcttcatgcaagaaaacaactcttccgcgattgacatgagggagatggacggactcctg
agcgtgtcggaaaccatcgacagagagcagctctgccccaggtctcctcgctgcttcatc
agcttcgacgtcgtggccttctccaaagaaaagtttcaactcatccacgtggagatcgaa
gtgaaagacatcaacgaccactctcctcatttcctgcggaacgagacacatctggagata
gtggagaatgtcccgctggactccagattccctctgcagattgctctggaccaggacgtg
ggtgagaactacatccagagctacaacatttcagcctccagtcattttgcagttgaagtg
cgtaatcgggatgatggcgtgaagttcgctgagctggtgctggtgagggagctcgacagg
gaagtggaggactgcttcacgatccaagtcacggccacggacggaggagtgcctgcaaag
tccgggtcaatggttgtaactatcagcgtgctggactttaatgacaacagcccgactttt
gagcacagctctctgaaagttgagctgaatgaggactcccctgttgggcacagggtgctc
aaagtgcatgcttttgaccctgacggcgggttgaacggtgaggtgacgtacgcctttgct
gacgggctatccgcagaagctggccgccttttccacgtcgacccttattccggggacgtg
accttaaaggcgctggttgattttgagaaaaggaggtcgtacgagctgaacatcaaagcc
tcagattcaggcactaactctgtcccgtccagctgcaaagttgtgatagagatcgtggac
gtgaatgacaacgcccctgaaatcagcatcaaaccgatgacctccagcagtgatggagtc
gcctacatcacagaagctgcggccactgagagcttcgtggctctgatcagcacctcggac
agagactctggctccaacgggtacgtgcgcatcagcctgctcgggcacgagcatttcacc
ctacagcaggcatacggggactccttcatgataatcaccagcactactttagacagagag
aagatcccagagtataacttgactgtgattgcagaggaccttggaagcccgcccttcaaa
actgtcagacagtacaccatccgtgtgaccgatgagaatgacaacccccctctcttcagt
aagtcactttttgaagtttcagtcctggaaaataacattccaggttcatatgtaaccacc
gttgtcgctcgtgatcctgatgtgggaaagaatgccaaagtgtcttacaaactcatagat
tcagaggtgccaggaggatcttcaatgtccacttatgtttctgtggattcactctcaggc
tctttgtacactttgaggtcttttgattatgagacactccagcagattgagctagtcatc
caagctgaagacagaggttccccctctctttcaagcacatcaacaatcagaattaaagtc
gtggatctgaatgacaattatccatacttcaccttccccgtccttgtaaacgactctgct
gatatccctctgccttttaatgcacccactggctatcttgcccttcgcgtctcagctgaa
gacgaggacgagggagtgaatggcgagctctactaccaaattgtacaaggtgacccacag
ctcttcacaatgaacaaagacactggagaaattgctttgaaacaatggctgacttctgaa
attggagacgtgctggaaatgaaagtcgctgtgagtgacaatggcagatccccgctcgct
agcagtgccaccattaggtttgtcgtctcagacacgcagccctctgaagaccaagttgtc
attgtgttgcggtcaagtgatgaagaaggatccggtttggatggctcgctaattgtcatt
attatgctcagcgggggctgtgcattgttgctgattgcaataatggttgttgttgtgaca
tgcaaactcagccgtggagggagaagtcgtggctccaagagagaagtgcatcacagcctg
ttcgacggagggcccatgcccatgctctgctcaacagaaccgaacatatacaccggacaa
caaggcttcttccacgagagaacctcctcctccttggctgattcctgcctgtatgaggag
aggagtggggactcagagacaaagatgttcctgccctccaagcatttccaagcaacatct
gtctggcaaggtgacaaattctgcttgcaagtgagtggcattggcaacagcgaccagctg
agcgtgaaggacagtggcaaaggggacagtgactttaacgacagtgactctgatatcagt
ggcgacggaggcaaaaagaacttcagcaccttccaaccaaggcttaaaagttcatccagc
actgcgaacagcttgtctggggattgccaaagcatgtactctgcagtaccaccacagagc
ttcagaggccccagagacaatgcatacacaataggattctccccagtaccagtcttcaac
aatcctcatggctatcctcacttttggaaggactctggttacggcacaaatcgccaaaaa
ttgaggagcagcatgcagacctggaccgggaccctcccgtcttactttcatgagcagcag
cgtgaggcaggtgttgagggtcttgaaatccacaaccagagtccatctattgttacagtg
gctacagaatcagaagttgccactatcttttaa

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