Anoplopoma fimbria (sablefish): 129105085
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Entry
129105085 CDS
T09102
Symbol
pcdh8
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
afb04515
]
129105085 (pcdh8)
Cell adhesion molecules [BR:
afb04515
]
Cadherins
Protocadherins
129105085 (pcdh8)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
129105085
NCBI-ProteinID:
XP_054471945
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Position
16:11644287..11647722
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AA seq
970 aa
AA seq
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MGFCKMAGLGLCMLLSLFVYSAQCTTTRYVTYEEDAPGTEIGNLSQDLKIDPADDPDTSF
RFMQENNSSAIDMREMDGLLSVSETIDREQLCPRSPRCFISFDVVAFSKEKFQLIHVEIE
VKDINDHSPHFLRNETHLEIVENVPLDSRFPLQIALDQDVGENYIQSYNISASSHFAVEV
RNRDDGVKFAELVLVRELDREVEDCFTIQVTATDGGVPAKSGSMVVTISVLDFNDNSPTF
EHSSLKVELNEDSPVGHRVLKVHAFDPDGGLNGEVTYAFADGLSAEAGRLFHVDPYSGDV
TLKALVDFEKRRSYELNIKASDSGTNSVPSSCKVVIEIVDVNDNAPEISIKPMTSSSDGV
AYITEAAATESFVALISTSDRDSGSNGYVRISLLGHEHFTLQQAYGDSFMIITSTTLDRE
KIPEYNLTVIAEDLGSPPFKTVRQYTIRVTDENDNPPLFSKSLFEVSVLENNIPGSYVTT
VVARDPDVGKNAKVSYKLIDSEVPGGSSMSTYVSVDSLSGSLYTLRSFDYETLQQIELVI
QAEDRGSPSLSSTSTIRIKVVDLNDNYPYFTFPVLVNDSADIPLPFNAPTGYLALRVSAE
DEDEGVNGELYYQIVQGDPQLFTMNKDTGEIALKQWLTSEIGDVLEMKVAVSDNGRSPLA
SSATIRFVVSDTQPSEDQVVIVLRSSDEEGSGLDGSLIVIIMLSGGCALLLIAIMVVVVT
CKLSRGGRSRGSKREVHHSLFDGGPMPMLCSTEPNIYTGQQGFFHERTSSSLADSCLYEE
RSGDSETKMFLPSKHFQATSVWQGDKFCLQVSGIGNSDQLSVKDSGKGDSDFNDSDSDIS
GDGGKKNFSTFQPRLKSSSSTANSLSGDCQSMYSAVPPQSFRGPRDNAYTIGFSPVPVFN
NPHGYPHFWKDSGYGTNRQKLRSSMQTWTGTLPSYFHEQQREAGVEGLEIHNQSPSIVTV
ATESEVATIF
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgggattttgcaagatggcaggacttgggctgtgcatgttgctttctttatttgtatac
tctgctcagtgtacaactacaaggtatgtcacctacgaagaggatgcacccggaacggag
ataggcaatctgtcccaagatttaaagattgatccagctgatgaccccgacacatcgttc
cgcttcatgcaagaaaacaactcttccgcgattgacatgagggagatggacggactcctg
agcgtgtcggaaaccatcgacagagagcagctctgccccaggtctcctcgctgcttcatc
agcttcgacgtcgtggccttctccaaagaaaagtttcaactcatccacgtggagatcgaa
gtgaaagacatcaacgaccactctcctcatttcctgcggaacgagacacatctggagata
gtggagaatgtcccgctggactccagattccctctgcagattgctctggaccaggacgtg
ggtgagaactacatccagagctacaacatttcagcctccagtcattttgcagttgaagtg
cgtaatcgggatgatggcgtgaagttcgctgagctggtgctggtgagggagctcgacagg
gaagtggaggactgcttcacgatccaagtcacggccacggacggaggagtgcctgcaaag
tccgggtcaatggttgtaactatcagcgtgctggactttaatgacaacagcccgactttt
gagcacagctctctgaaagttgagctgaatgaggactcccctgttgggcacagggtgctc
aaagtgcatgcttttgaccctgacggcgggttgaacggtgaggtgacgtacgcctttgct
gacgggctatccgcagaagctggccgccttttccacgtcgacccttattccggggacgtg
accttaaaggcgctggttgattttgagaaaaggaggtcgtacgagctgaacatcaaagcc
tcagattcaggcactaactctgtcccgtccagctgcaaagttgtgatagagatcgtggac
gtgaatgacaacgcccctgaaatcagcatcaaaccgatgacctccagcagtgatggagtc
gcctacatcacagaagctgcggccactgagagcttcgtggctctgatcagcacctcggac
agagactctggctccaacgggtacgtgcgcatcagcctgctcgggcacgagcatttcacc
ctacagcaggcatacggggactccttcatgataatcaccagcactactttagacagagag
aagatcccagagtataacttgactgtgattgcagaggaccttggaagcccgcccttcaaa
actgtcagacagtacaccatccgtgtgaccgatgagaatgacaacccccctctcttcagt
aagtcactttttgaagtttcagtcctggaaaataacattccaggttcatatgtaaccacc
gttgtcgctcgtgatcctgatgtgggaaagaatgccaaagtgtcttacaaactcatagat
tcagaggtgccaggaggatcttcaatgtccacttatgtttctgtggattcactctcaggc
tctttgtacactttgaggtcttttgattatgagacactccagcagattgagctagtcatc
caagctgaagacagaggttccccctctctttcaagcacatcaacaatcagaattaaagtc
gtggatctgaatgacaattatccatacttcaccttccccgtccttgtaaacgactctgct
gatatccctctgccttttaatgcacccactggctatcttgcccttcgcgtctcagctgaa
gacgaggacgagggagtgaatggcgagctctactaccaaattgtacaaggtgacccacag
ctcttcacaatgaacaaagacactggagaaattgctttgaaacaatggctgacttctgaa
attggagacgtgctggaaatgaaagtcgctgtgagtgacaatggcagatccccgctcgct
agcagtgccaccattaggtttgtcgtctcagacacgcagccctctgaagaccaagttgtc
attgtgttgcggtcaagtgatgaagaaggatccggtttggatggctcgctaattgtcatt
attatgctcagcgggggctgtgcattgttgctgattgcaataatggttgttgttgtgaca
tgcaaactcagccgtggagggagaagtcgtggctccaagagagaagtgcatcacagcctg
ttcgacggagggcccatgcccatgctctgctcaacagaaccgaacatatacaccggacaa
caaggcttcttccacgagagaacctcctcctccttggctgattcctgcctgtatgaggag
aggagtggggactcagagacaaagatgttcctgccctccaagcatttccaagcaacatct
gtctggcaaggtgacaaattctgcttgcaagtgagtggcattggcaacagcgaccagctg
agcgtgaaggacagtggcaaaggggacagtgactttaacgacagtgactctgatatcagt
ggcgacggaggcaaaaagaacttcagcaccttccaaccaaggcttaaaagttcatccagc
actgcgaacagcttgtctggggattgccaaagcatgtactctgcagtaccaccacagagc
ttcagaggccccagagacaatgcatacacaataggattctccccagtaccagtcttcaac
aatcctcatggctatcctcacttttggaaggactctggttacggcacaaatcgccaaaaa
ttgaggagcagcatgcagacctggaccgggaccctcccgtcttactttcatgagcagcag
cgtgaggcaggtgttgagggtcttgaaatccacaaccagagtccatctattgttacagtg
gctacagaatcagaagttgccactatcttttaa
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