Anoplopoma fimbria (sablefish): 129105121
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Entry
129105121 CDS
T09102
Symbol
nup62l
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin 62 like
KO
K14306
nuclear pore complex protein Nup62
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129105121 (nup62l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129105121 (nup62l)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129105121 (nup62l)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
DUF4164
Motif
Other DBs
NCBI-GeneID:
129105121
NCBI-ProteinID:
XP_054471992
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Position
16:12945113..12947562
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AA seq
584 aa
AA seq
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MSGGFNFGQATTGFSFGAPKPAAAAPATGFGMTGSVPAAAGGGFAFGTXPQAAANNNNPA
GSFSFGTPAKSTPAGGGFSFGTPNASFGMGTPQAAAAPPQGLTLGTTAAPAMGSGFPMGT
GLSAQTTMASMASMAAPAGGGFAFGTPAQAQQPQPVVQHQPAAPPTAAVTATTGAGGMSF
GGFSFGATKVQATTAAAPVAAPTVAPGGGFSFGNSAPSNLTMGMQAQQPPTAAVTASQGG
GFAFGIKPSSTPAPLASTQATLAPGPSLFASPIPTAAVAAAAAATAAAATVTAAATATGF
TLGVAPNLAASTAPATTTAAGGGLAFMLKPLGAATITSTSVPISAPASTVAAATTGAATA
FTLGLKPSTTGITATSTATTISTTTAPPVMTYAQLEGLINKWSLELEDQERHFLQQATQV
NAWDRMLVENGEKITSLHKEMEKVKLDQRRLNQELDFILSQQKELEDLLCPLEESVKEQS
GTIYMQNADEERERTYKLAENVDAQLKRMSQDLKEIIEHLNTSSGPADTSDPLQQICKIL
NTHMDSLQWIDQNSVLLQRRVEEVSKLCDNQRKEQEKTFRLTFD
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcgggtttaacttcggtcaggccaccacgggcttctctttcggagctccgaag
ccggcagccgcggcccccgccacaggcttcgggatgaccggctccgtgcctgcggccgcc
ggaggaggcttcgcgttcggcactngcccccaggccgccgccaacaacaacaaccccgcc
ggctcgttcagctttggcaccccagcaaagagcaccccagccggcggaggcttctccttt
gggacccccaacgcctcattcggcatgggcacccctcaagccgcagcagcaccaccacag
gggctgactctgggcaccacagcagctccagccatggggtcagggttccccatgggcacg
ggtttgtcagcacagaccaccatggcctccatggcctccatggccgctcctgcaggaggg
ggcttcgcctttggtacacctgctcaagctcaacaaccccaacctgtggttcaacaccaa
cctgcagcaccaccaacagctgcagtgacagccactacaggagcaggcggcatgtcgttt
ggagggttcagctttggagccaccaaggtccaggccaccacggctgcagccccggttgct
gcccccactgtcgccccaggagggggcttcagctttggcaacagcgctccgtccaacctt
accatgggcatgcaggcccagcaaccacccactgctgcagtcacggcaagtcagggtgga
ggatttgcctttgggattaaaccctcatcaaccccagctcctcttgcttcaacccaggcc
accctagctccaggcccgtctctctttgcttcacccatccctacagctgcagttgctgct
gccgccgccgccactgctgctgctgctactgtcactgcagctgcaacagccacaggcttc
actttgggtgtagctccaaacttagcagcaagcactgctcctgcaaccaccacagcagct
ggtggaggtttggcttttatgctcaaacctctgggggcagctaccatcacctccacctct
gtccccatctccgcccctgcttccactgttgcagctgccacaacaggtgctgcgacagcc
tttacactggggctcaaaccttcaacaaccggtatcacagcaacttctacggcaacaacc
atctccacaaccactgctcctccagtgatgacctacgcccagctagagggtctcattaac
aagtggagccttgagctcgaggaccaggagagacatttcctacagcaggctactcaggtg
aatgcctgggaccgcatgctggtggagaacggagagaagatcacatccctgcataaggag
atggagaaggtgaagctggaccagaggaggctaaaccaggagctggatttcatcctgtcc
caacagaaagagctggaggacttactctgcccgctcgaggagtcggtgaaggagcagagc
ggaaccatctacatgcagaacgccgacgaggaacgtgaaagaacgtacaagctcgccgag
aacgtggacgcacaactgaagaggatgtcgcaggatctgaaggagatcatcgagcacctg
aacacgtccagtggcccagcagacaccagtgacccgcttcagcagatctgcaaaattctc
aacacccacatggattcacttcagtggatcgatcagaactctgttcttctgcagagaaga
gtggaagaagtgtctaaattgtgtgacaaccagcgcaaggagcaggagaaaacctttcgt
ttaacgtttgactga
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