Anoplopoma fimbria (sablefish): 129105131
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Entry
129105131 CDS
T09102
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a-like
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04145
Phagosome
afb04814
Motor proteins
afb05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
129105131
09142 Cell motility
04814 Motor proteins
129105131
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129105131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129105131
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
afb04812
]
129105131
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
129105131
Cytoskeleton proteins [BR:
afb04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
129105131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EML
Dynein_IC2
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_IP5PC_F
Nbas_N
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
129105131
NCBI-ProteinID:
XP_054472005
LinkDB
All DBs
Position
16:complement(13045691..13062983)
Genome browser
AA seq
613 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEEERKKQAADQLKDAAQHQDDSDLEKKRREAD
ALLQSMGITSETPVVPPPISPTTKSAGTPSEAGSQDSDGAVGPRRGTPKLGMAKVTQVDF
PPRETVSYTKETQTPVMTQQKQEEEEEEESAPTQPAVETQIEKPDQKVDEEVCVFLCSIP
HELTEEEKLQILHSEEFVNFFDHSTRIIERAISEHVDLFFDYSGRDLEEKEGEIQAGTKL
SLNRQFLDERWSKHRVVTCLDWSLQYPELLLASYNNNEDAPHEPDGVALVWNMKYKKATP
EYVFHCQSAVMSAAFAKFHPNVVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVY
CVNVVGTQNAHNLISISTDGKICSWSLDMLSQPQDSMELVFKQSKAVAVTSMSFPLGDVN
NFVVGSEDGSVYMSCRHGSKAGISEMFEGHHGPITGINCHTAAGPLDFSHLFVTSSFDWT
VKLWSTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGVGHLDLWNLNNDTEVPTASV
TVDGNPALNRVRWAHSGKEIAVGDSDGRVLVYDVGEQTAVPRNDEWTRFVRTLSDINENR
DDAEELAAQRLAA
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaaagtgagctgaaagcagagcttgaaaggaagaaacaacgcctggcacaa
atcagagaggagaagaaacggaaggaggaggagcgcaagaagcaagcggcggaccaattg
aaagatgctgcacaacaccaggatgattctgacctggagaaaaaaagacgtgaggctgac
gctcttctacagagtatgggcataacctcagagacccctgttgtccctcctcccatctct
ccaactactaaatcggcgggcacaccaagcgaggcagggagccaagactctgatggtgcc
gtgggacccaggcgtggaactccaaaactgggaatggccaaagtcacacaagtggacttc
cctccacgtgagactgtgtcctacacaaaagagacccagacacctgtcatgactcagcag
aaacaagaggaagaagaggaggaagaaagtgctccaactcaaccagcagtggagactcag
attgagaaacccgaccagaaagtggatgaggaagtttgtgtttttctgtgtagcatcccc
cacgagctgacagaggaggaaaaactccagatcctgcactctgaagagtttgtgaatttc
ttcgaccacagcactcgcattattgagcgggctatatcagagcacgtggacctcttcttt
gactacagtggccgtgacctggaggagaaggagggtgaaatccaggccggaacaaagctc
tctctcaacaggcagttcttggacgagcgctggtccaagcatcgtgttgtcacctgcctg
gactggtccctccagtatcctgaactcctacttgcctcatacaacaacaatgaggacgct
cctcacgagccagacggcgtggccttagtgtggaacatgaagtacaagaaggccacaccg
gagtacgtcttccactgtcagtctgctgttatgtctgctgcgtttgccaagttccacccc
aacgttgtggtggggggcacatactcgggccagattgtgctgtgggacaacaggagcaac
aagaggactccggtgcagaggactcccctgtcagcagcagcacacacgcaccctgtatac
tgtgtgaatgtggtcggcacccagaacgcccacaacctgattagcatctccaccgatggc
aagatctgctcctggagtctggacatgctctcacagccacaggacagcatggagctggtg
ttcaagcagtccaaagctgtagctgtcacctccatgtctttccctctcggagatgtcaac
aatttcgtggtgggcagcgaggacggctccgtctacatgtcgtgtcgtcatggaagcaaa
gcgggtatcagtgagatgttcgagggccatcatgggcccatcacagggatcaactgccac
acagctgcagggcctctggacttctcccacctgtttgtcacctcctctttcgactggact
gtcaagctgtggagcacaaagaacaacaagccgctgtactcatttgaggataactcggat
tacgtgtatgatgtcatgtggtctccgactcaccctgctctgtttgcttgtgtggacgga
gtgggtcatctggacctgtggaacctcaacaacgacaccgaggttcctactgccagcgtc
acagtggacggtaacccggctctcaacagggtcagatgggctcattctggcaaagaaatc
gctgtgggagactctgatggacgagttctcgtgtatgatgttggagagcaaactgcggtt
ccacgaaacgacgagtggacccgtttcgttcgcacgctgtcggatatcaacgagaacaga
gatgatgcagaggagctggcagctcagcgcctggctgcctga
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