Anoplopoma fimbria (sablefish): 129105172 Help Entry 129105172         CDS       T09102                                  Symbol nfasca Name (RefSeq) neurofascin homolog (chicken) a   KO K06757   neurofascin Organism afb  Anoplopoma fimbria (sablefish) Pathway afb04514   Cell adhesion molecule (CAM) interaction afb04517   IgSF CAM signaling Brite KEGG Orthology (KO) [BR:afb00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04514 Cell adhesion molecule (CAM) interaction     129105172 (nfasca)    04517 IgSF CAM signaling     129105172 (nfasca)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:afb04515]     129105172 (nfasca) Cell adhesion molecules [BR:afb04515]  Immunoglobulin superfamily   L1 family    129105172 (nfasca) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  I-set Ig_3 ig Ig_2 fn3 Bravo_FIGEY V-set Ig_VEGFR-1-like_5th FN3_DSCAM-DSCAML_C C2-set_2 Ig_PDGFR_d4 Fn3_PBP1 Fn3_Dep-1_3rd MUC7 Motif Other DBs NCBI-GeneID:  129105172 NCBI-ProteinID:  XP_054472036 LinkDB All DBs Position 17:complement(11648696..11709549) Genome browser AA seq 1354 aa AA seqDB search MSLVLLLWREAAPIEVPQDPKILQELKQPPTIVKQSVKDYIVDPRDNIIIECEAKGNPVP MFSWRRNGKFFNIGKDPRVTMRKRSGTLEIGFRSGGRPEDYEGEYQCFATNDFGVALSNK ILLQVSKAPLWPKEVLEPVVVTEGSQLILVCNPPPGLPPPFTFWMNSAMTSIPQDKRVSM GLNGDLYFSNVLTKDAHTDYSCNARFLFTQTIQQKNPFTLKVLTSRKVAESTPTFLSPSG TESSKMVLRDEQLLLECIAAGLPTPTIKWFKKGGDLPGRKVKFDNYNKTLKIINVSEEDA GEYVCMANNHLGSIRHSIFVQVKAAPYWLDKPTNLVLAPEEGGRLVCRANGNPKPNIQWL TNGQPTENAPHSPSRHVLGDTIIFRSVQMGNSAVYQCNASNQHGYLLANAFVSVLDMPPR MLGPKNQLIKVIENNRTYLDCPFFGSPLPELRWFKNGQGSGLDGGHYRVYINGTLEIKRA RAEDEGTYTCVATSMLGTAENQVRLEVKEPTRIVRAPERRSAIRGSTAHFDCKVKSDPSL PITVAWTKDDKPLYLGWRLRKDEESLTIPNVNEGDEGTYTCTVKSEIDQDSASARLTVLD RPDPPLDLDLSDPAARSVRLTWIPRNYHQSPVTEYLVQFEEDRWEPGRWQDLSIYPGELN SVILQLAPFVNYQFRVIAINAVGRSQPSQPSPRYKTSGAAPDAIPKGLRGWGSKKDNMEI TWEPLLDLERNGPNLHYSVWWRRKDFGEGWSNVTTVVSKHVVLNTETYVPYEIKIQARNE FGQGPESNVVVGYSGEDTPTDAPTDLRVSKVDSTEANLHWKPVDLSSVQGEFKEYRLYYW RESSLVPGLVVSKEKKTKGFYSIMAEPSGILSDLVPYSQYKMFLVVANNLFEGPPSNTVE VTTKEGVPDTPKFFRINRRTFDTIHLEWDKPLEPNGILIGYQLKYQTVNGSRVARTQLET LPPNVTQFTLRLPDRSTRYKFYLSALTQVGAGEFFVEESPHFANEGESLYDTDVVGLGFV DSLLFELTDASVASAFSPTPPPLAPLPPTTIAPTTISTSTSTTPTTPTPTTTTTTTTTTT TSSTTTTTTTEATTTTTTPELVTFKRTDQNVLVAQGWEIWNLTVETNSNYANVSWKHNFP AGSSEFVLEFTLDSNKSVKTVLVKQQPPITVADLIAGAKYHLRVVSHELNSVSSTSLIFK TKPAYIDQVDIATQGWFIGLMCAIALIILILLIVCFIKRSRGGKYPVRDKKDLPLDPVDQ KEDGSFDYQNENENSQREHSDEDNKPLQGSQTSLDGNVKESDDSLVDYGEGGDGQFNEDG SFIGQYTVKKDKDETEGNESSEATSPVNAIYSLA NT seq 4065 nt NT seq  +upstreamnt  +downstreamnt atgtcattagtgctgttactgtggcgcgaagcagcacccatcgaagtcccacaagaccca aagatactgcaggaactgaagcagccccccaccatagtcaaacagtcagtgaaggactac atagtggaccccagagataacatcatcatcgagtgtgaggccaagggcaacccagtgcca atgttctcatggcggaggaacgggaagtttttcaacattgggaaagatcccagagtgaca atgcgaaaacgctctggaactctggagatcggtttccgtagcggaggacgaccagaggac tatgagggggagtaccagtgttttgccaccaatgacttcggagtggctctgtccaacaaa atcctgctccaggtctccaaggctcctctgtggcctaaagaggtgctggagccagtagtg gtgactgaaggctcccagctgattctagtctgcaaccccccaccgggcctgcctcctccg ttcaccttctggatgaacagcgctatgacttcgatcccgcaggataagagggtgtccatg ggtctgaacggagacctgtacttctccaatgtcttgaccaaagacgctcacactgactac agttgcaacgctcgcttcctcttcacacaaaccatccagcagaagaaccccttcacactc aaagtcctgacgagccgtaaagtagccgagtccacgccaaccttcctctcaccctcgggg accgagagctccaagatggtgctacgggacgagcaactgctgctggagtgtatcgctgct ggacttcccacgcccaccatcaagtggtttaagaagggtggggacctgccagggagaaag gtgaagtttgacaactacaacaagaccctgaagatcatcaacgtgtcagaggaggatgct ggggagtatgtatgcatggccaacaaccatctaggcagcatacgccactccatctttgtc caggtcaaagcggctccttattggctggacaaacccaccaacctggtgctcgctccggag gagggcggccggctggtgtgtcgagccaacggaaaccccaaacccaacatccagtggctg accaacggacagcctacagagaacgccccccacagccccagtagacacgtgctcggtgac accatcatcttccgctcagtgcagatgggaaacagcgctgtctaccaatgcaacgcctcc aaccagcacggctacctgctggccaacgccttcgtcagcgtcctcgacatgcctccgagg atgctgggccctaaaaaccagctgatcaaagtcatcgagaacaatcgcacctaccttgac tgtcccttcttcgggtctcctctgcccgaactacgctggtttaagaacggacagggcagt gggctggacggaggtcactaccgcgtttacatcaacggcaccctggagatcaaacgggcc cgagcagaggacgagggcacctacacctgtgtggccaccagcatgctgggcacggccgag aaccaggtccgcctggaggtcaaagagccaacccgtatcgttcgagccccggagcgccgg tcggccatcaggggctccacggctcacttcgactgtaaggtgaagtccgatcccagcctg cccatcaccgtggcctggaccaaggacgacaagcctctctacctgggctggaggctgagg aaagacgaggagtcgctgaccatccccaatgtgaacgagggtgatgagggaacctacacc tgcaccgttaaatctgagatagaccaggactcagcctcagcccgcctcaccgtgttagac cgtccagacccccccttggatctggatttgtcagaccccgcagcccgcagcgttcgcctc acctggatccctagaaactaccaccagagcccagtcacagaatacctggtccagtttgag gaggaccgctgggagccgggtaggtggcaggacctgtccatataccctggagaactgaac tctgtcatcctgcagcttgcccccttcgtcaactaccagttcagggtcatcgccatcaac gcagtgggccggagtcagcccagccagccctcgccacggtacaagaccagcggagctgcc ccagatgccatccccaaaggtctacgaggatggggatccaagaaggacaatatggagatc acctgggagcctctgcttgatctggagaggaacggaccgaacctgcactacagtgtgtgg tggagacggaaggattttggagaggggtggagtaacgtgaccacggtggtttccaaacat gtggtcctcaacacagagacctacgtgccttacgagatcaaaatccaggccaggaatgaa tttggacaaggacctgagtctaatgtggtcgttggatactctggagaggacacgcccacc gacgctcccactgacctgcgggtgtcaaaggttgacagcaccgaggccaacttgcactgg aagcccgtggacctgagctctgtgcagggagagttcaaggagtacagactgtactactgg cgtgagtcgagtctggttccgggtctggtggtcagtaaggagaagaagaccaaaggtttc tacagcatcatggccgagccgtctggcatcctcagtgacctggtgccctactcacaatac aagatgttcctggttgtggccaacaacctctttgagggtccacccagcaacacggtggag gtcaccaccaaggagggagtgcccgataccccgaagtttttcaggattaaccgcagaact tttgacaccatccaccttgaatgggacaaacccctggagcccaacggcattctaattgga taccagctcaagtaccaaacagtcaatggctccagagtggctcgtacccagttggagact ctccctcctaacgtgacacagttcaccctccgcctgccggaccgatccacccgatacaag ttctacctgtcagcgctcacccaggtgggagcaggggagttctttgttgaggagtccccg cacttcgccaatgaaggtgagtctttatacgacactgatgtagtgggattgggcttcgtc gactctctcctgtttgagcttacggacgcctccgtggcttcagctttctctcctactcct cctcctctcgctcctcttcctcctactaccatcgctcctacaaccattagtacctcaact tctaccactccgacaactccgactccgactactactactactactactactactactact acttcttctaccaccaccaccactacaaccgaggcgaccactaccaccacaactcctgag ctggtcaccttcaagcgtaccgatcagaatgtgttggtggcccaagggtgggagatctgg aatctgacggtggagactaacagtaactacgctaacgtcagctggaaacacaacttcccg gccggcagcagcgagtttgtgctagagttcacactggacagcaacaagtcggtgaaaact gttctggtgaaacagcagccccctattacggtggcggatctgatcgcaggcgccaagtac cacctgagggttgtctcccatgagctcaacagcgtcagcagcacatctctcatctttaag accaaaccagcctacatagaccaggtagacatagccactcaaggctggttcattggcctg atgtgtgccattgccctcatcatactgattctcctcatcgtctgcttcatcaagaggagt cgtgggggcaaatacccagtccgtgacaaaaaagatctccccttggacccagtagatcag aaagaggacggatcctttgattaccagaacgaaaacgagaacagccagagagaacacagc gacgaggacaacaagcctctgcagggcagccagacgtcgctggacggcaatgtgaaggaa agcgatgacagtctggtggactacggcgaaggcggcgacggccagttcaacgaggacggc tctttcatcggccagtacacggtgaagaaggacaaagacgagacggagggcaacgagagc tctgaggccacctcgcccgtcaacgccatctactcgctggcgtag

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