Anoplopoma fimbria (sablefish): 129105207
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Entry
129105207 CDS
T09102
Name
(RefSeq) granule associated Rac and RHOG effector protein 1-like
KO
K26671
granule associated Rac and RHOG effector protein 1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129105207
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129105207
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4745
Hydrolase_6
Motif
Other DBs
NCBI-GeneID:
129105207
NCBI-ProteinID:
XP_054472074
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All DBs
Position
2:24758013..24777273
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AA seq
1107 aa
AA seq
DB search
MYCCSAQESKMDYKRRFLLGGSKQKVQQHQQYQMPELSRTLSASLASSCSASSPMGTGVG
MPGSCHPPPSCATTAVADIQQGISKYLDALNVFCRASAFLTDLFSSVFRNSHYSKAAMQL
KDVQEHVMEAASRLTAAIKPEIAKMLMELSAGAANFKDQNDFSLQDVEVLGRCFLTVMQV
HFQFLSQALQKVQPVAQSCLAEALAQAQERCSNARSQSSDLGPLTELEEASRSWKGAAQA
MARLRERGRDGCLAGIQVQHLFCSNNTTIPEHQLKELNMKIDNALQAYKAALESLGHSEY
ALKAGFHLNPKAVEAALQSCCSEAEAQQAGRMQTTSQPIQCELPTIPVQIGSHFLKGVSF
NESAAENLKLKTHTMLQLIKEVLGQNGMTPRDDSPVTEVLNQVCPSSWRGACKTAVQLLF
AQAGLVVVDTAQIENKEAYAPQITLEGSKVVVQVPSTWCLKEDPATMSLLQRSLDPEKTL
GLVDVLYTAVFDINRWKERKEQALPTIQMQLQREIPDYGGQADLPLGTSSKTSSGLPKTI
SKLTSKFTKKVSSSSNSGGSYSIPSTPSRSMLTTSSSEDKTKSLGHGDGRLQSILQMSSL
SCPSDSSQQSQLANGLVSDDQGMNLPTDQEMQDVIDFLSGFNMGKSQQASPLVKRRNSVA
SANPAELKPPSGPPPTSQSSSHSALHPQAQSLTQPQPQPPPSVQKQQPQPQQQPPPPQQQ
QPAPPPPQQPSPQALQYYQHLLQPISQQQPPPPQLPPQQTPPQVLSQQRVASKWLSSSGQ
QPPPQGPPAGLSPLGPIGQWGSPGLPDLSSDLYSLGLVSTYMDSVMSEMLGQKPQGPRNN
TWPNRDQSEGVFGVLGDTLPFDPAVGSDPEFARYVAGVSQAMQQKRQVQHIRRPSNTRSN
WPMPEEQHRTWSHPEYYSEGEAVNSSWSANQGDSASSSDETSSANGDSLFSMFSGPDLVA
AVKQRRKHSCGEPEVCTLPSPPLHHICDDNQDSKTKTWPPKAPWQHSTHNNTMPNPSSSL
YQMNIPPSSQWSDSMQMLQSPVWSTASDCSPSAGISSGFPFTQQQQQQQQQQQQQQQQQQ
QQHKPMTKGFKSFPLKHEHRPSYLHQY
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgtattgttgtagtgcgcaggaaagtaaaatggactacaagcgtcgctttttgctcggc
gggtccaagcagaaagtgcaacagcaccagcagtaccagatgcctgagctgagccggacc
ctgagcgcctccctggcctcctcttgctcggcctcctcgcccatgggcactggggtgggc
atgcccggcagctgccacccacctccttcttgcgccaccaccgcagttgcagacatccag
caaggcatctccaaatatttggatgccctcaacgtgttctgccgggccagcgccttcctc
acggacctgttcagcagtgtgttcaggaactctcactattccaaagcagctatgcaactg
aaggacgtgcaggaacacgtcatggaggcggccagcaggctgactgcagcaataaagccc
gagatcgccaagatgttgatggagctgagcgccggggccgccaacttcaaagaccagaac
gacttcagcctgcaggatgtcgaggtgctgggtcgatgcttcctcacggtgatgcaggtc
catttccagtttctatcacaggctttgcagaaggtccagcccgtggctcagtcctgcctg
gcagaggctcttgcccaggcccaggagcgctgctccaacgcccgctcccaaagctctgac
cttgggcccctcacggagctggaggaagcctcccgctcatggaaaggtgcagctcaggcc
atggcgaggctgagagagaggggccgcgacggctgcctggcaggcatccaggttcagcat
ctcttctgctccaacaacaccaccatccctgagcaccagctgaaggagctcaacatgaag
attgacaatgctttacaggcctacaaagcagcactagagagcctgggccatagtgagtat
gcactgaaggccggctttcatcttaaccccaaagctgtggaggcggccttacagagctgc
tgcagtgaggcggaggcccagcaggccggcaggatgcagaccacctcccagcccatccag
tgcgagctgcccaccataccagtacagatcggctcacatttcctcaaaggagtttccttc
aacgagtcagcggctgaaaacctcaaactgaaaacgcacacgatgctgcagctcattaag
gaggtgctgggccagaacggaatgacccccagggatgactctcccgtcactgaggtcctc
aaccaagtctgcccatccagttggagaggagcctgcaagacagcagtccagctgctgttt
gcccaggccggtctggttgttgttgatacagctcagattgagaacaaggaggcctatgct
ccccagatcactcttgaaggttccaaagtggtggtgcaggttccctctacatggtgtctg
aaggaggacccagccactatgtccctgctccagcggagcttggatccggagaagacactc
ggtctcgtcgacgtgctgtacactgcagtgtttgacatcaacaggtggaaggagagaaaa
gagcaagccttgcccactattcagatgcagctgcagcgggagatcccggattatggcggc
caggcagacctgcctctaggcaccagctccaagacctccagtgggttgcccaaaacaata
tccaagctcacttccaagttcacgaagaaggtctcctccagctccaacagtgggggcagt
tactccatccctagcaccccgtctcgcagcatgctgacaaccagtagctctgaggataag
accaagagcctgggccacggcgacgggaggctgcagagcatcctgcagatgagcagcctg
tcctgcccctctgactcctcccagcagagccagcttgcaaacggtttagtgtccgatgac
caggggatgaacctgccgactgaccaggagatgcaggatgtcatcgactttctctcagga
ttcaacatgggaaaatctcagcaggcctcgcccctggtcaagaggaggaactctgtggcg
tctgcgaaccccgctgagctgaagccgccgagtggacctccgccgacctcccaatctagc
tctcacagtgccctacatcctcaagctcagagcctgacgcagcctcagccccagcctcca
ccatcggtgcagaaacagcagcctcagccacaacaacagccacctcctccacagcaacaa
cagcccgctcctccaccccctcaacagccctccccccaggccctgcagtactaccagcac
ctcctgcagcccatcagtcagcagcagccacctcctcctcagcttcctcctcagcagacc
cccccccaggtcttgtcacagcaaagagtggcaagcaagtggctcagctcctctgggcaa
cagcctccaccgcaaggccccccagcaggactgtcaccgctgggtccaatcgggcagtgg
ggctctcctggactgcctgacctgagctcagatctgtacagcctgggcctggtcagcacc
tacatggacagtgtcatgtcagagatgctgggtcagaagccacaggggccccgcaacaac
acctggcccaacagggaccagagtgaaggagtgtttggagtcctgggagacacgctgccc
tttgacccagcagttggctccgacccagagtttgcacgttacgttgccggcgtcagccag
gccatgcagcagaagcggcaggtgcagcacatccgtcgccccagcaacacgcgcagcaac
tggccaatgcctgaagagcaacacaggacctggtcccacccagagtactacagtgagggg
gaggccgtaaacagcagctggtcagccaatcagggggactcggccagctccagcgatgag
acgtcttcagccaatggtgacagtctgttttccatgttttctggtccggaccttgtagcg
gcggttaaacaaaggagaaaacacagctgtggtgagccggaggtgtgcactctgccctca
ccaccactccatcacatctgcgatgataaccaggacagcaagactaaaacctggcctccc
aaagcgccatggcagcactccacccacaacaacaccatgcccaatcccagctcttccttg
taccagatgaacatccctccttcctcccagtggagcgactccatgcagatgctgcagtct
cccgtgtggtccactgccagcgactgctccccctccgccggcatctcctctggttttccc
ttcacccagcagcagcagcagcaacagcaacaacaacaacagcaacaacaacagcagcag
cagcaacacaaacccatgaccaagggctttaaatccttccccctcaaacatgagcacagg
ccctcctaccttcaccagtactga
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