Anoplopoma fimbria (sablefish): 129105243
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Entry
129105243 CDS
T09102
Symbol
tubb1
Name
(RefSeq) tubulin beta-1 chain
KO
K07375
tubulin beta
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04145
Phagosome
afb04540
Gap junction
afb04814
Motor proteins
afb05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
129105243 (tubb1)
09144 Cellular community - eukaryotes
04540 Gap junction
129105243 (tubb1)
09142 Cell motility
04814 Motor proteins
129105243 (tubb1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129105243 (tubb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129105243 (tubb1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
afb04812
]
129105243 (tubb1)
04147 Exosome [BR:
afb04147
]
129105243 (tubb1)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
129105243 (tubb1)
Cytoskeleton proteins [BR:
afb04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
129105243 (tubb1)
Exosome [BR:
afb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129105243 (tubb1)
Exosomal proteins of colorectal cancer cells
129105243 (tubb1)
Exosomal proteins of bladder cancer cells
129105243 (tubb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_2
Tubulin_3
Vein_beta-barrel
Motif
Other DBs
NCBI-GeneID:
129105243
NCBI-ProteinID:
XP_054472122
LinkDB
All DBs
Position
17:complement(20403608..20406880)
Genome browser
AA seq
473 aa
AA seq
DB search
MREIVHLQIGQCGNQIGSKFWEVISEEHGINATGIYEGDSDVQLERANVYFNEAQGGKYV
PRALLVDLEPGTMDSVRGSRIGALFRPDNFIHGNSGAGNNWAKGHYTEGAELVEQVIDRV
RNESESCDCLQGFQLVHSLGGGTGSGMGTLIINKIREEYPDRIMNTFSIMPSPKVSDTVV
EPYNATLSVHQLLENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVCMTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDARNMM
TACDPRRGRYLTVAGIFRGRMSTKEVDEQMLAVQQKNSNYFVDWIPHNVKVAVCDIPPRG
LKMASTFIGNNTAIQEIFRRVGEQFALMFRRKAFLHWYTGEGMDEMEFTEAESNLNDLVS
EYQQYQDATTDLDWEAEDGEEEGPSSPAATNVQSRVEVNLKTVTETSGQETVD
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaattgtacatctgcaaattggacaatgtggcaaccagatcggctcaaagttt
tgggaagtgatcagtgaagaacatgggatcaatgcgacaggcatctatgagggagacagc
gacgtccagctggagagggccaacgtctacttcaatgaggcgcagggtggtaaatacgtc
cccagggccctgctcgtggacctggagcccggtacgatggacagtgtgagaggaagccgc
atcggagccctctttaggccagacaacttcatccacgggaactcaggagccggcaataac
tgggcgaagggccactacacggagggagcggagctggtggagcaggtgatcgacagagtg
aggaacgagagtgaaagctgcgactgcctgcagggctttcagctggttcactctctgggc
ggtggcaccggctccggcatgggaaccctcatcatcaacaagatccgagaggagtacccg
gaccgcatcatgaacactttcagcatcatgccctcccctaaagtctccgacacggtggtg
gagccctacaacgccacgctgtcggtccaccagctgctggagaacacggacgagaccttc
tgcatcgacaacgaggccctctacgacatctgcttccgcacgctgaaactgaccacgccc
acctacggggacctcaaccacttggtctgcatgaccatgagcggggtcacgacctctctg
aggttccccgggcagctcaacgcggacctgaggaagctggcggtcaacatggtgcctttc
cctcgcctccacttcttcatgccaggcttcgcccccctgacggcccgcggcagccagcag
tacagagccctcacggtgcctgagctcacccagcagatgttcgatgcccggaacatgatg
acagcgtgcgacccaaggagggggcgctacctcaccgtggctggcatcttccgtggacgg
atgtccaccaaagaggtggacgagcagatgctggcggtccagcagaaaaacagcaactac
ttcgtggactggatcccccataacgtcaaggtcgccgtgtgtgacatcccaccccgaggc
ctaaagatggcctccaccttcatcggcaacaacacggccattcaggagatattccgccgt
gtgggagagcagttcgccctgatgttcagacggaaggcttttctccactggtacacggga
gaaggtatggatgaaatggagttcaccgaggcagagagcaacctcaacgacctggtgtcg
gagtaccagcagtaccaggacgccaccactgatctggattgggaagcagaggatggagaa
gaggagggaccctcgtcaccagcagcaacaaatgttcagtctcgggtggaggtgaatctg
aaaacagtgactgaaacaagcggacaagaaacagtggattga
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