Anoplopoma fimbria (sablefish): 129105254
Help
Entry
129105254 CDS
T09102
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 9-like
KO
K08624
a disintegrin and metalloproteinase with thrombospondin motifs 9 [EC:3.4.24.-]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
afb01002
]
129105254
Peptidases and inhibitors [BR:
afb01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
129105254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
GON
TSP_1
ADAMTS_spacer1
Reprolysin
Pep_M12B_propep
TSP1_spondin
ADAMTS_CR_2
Reprolysin_5
TSP1_CCN
Reprolysin_3
Reprolysin_2
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
129105254
NCBI-ProteinID:
XP_054472137
LinkDB
All DBs
Position
17:complement(4678794..4722159)
Genome browser
AA seq
1939 aa
AA seq
DB search
MHVLFWGLGFLLFPDFLNVVASTGKLLLSSSTVKQEIGAYEIVTPVRVNEAGDKFPTSVH
FKRKRRSLEESPGNTTDHWASPNIHYRISAFGQHYHLNLTLDSGFIAPLYTVTVLGVPRG
DNVTDFATDGEEEEEEDTELRHCFYKGLVNAQAEHAAVISLCSGLLGTFRSPGGEYFVEP
LHSYQGEQYEEEHTKPHIVYRKHASKKQTSEENSACDTSGHKHRYKRHKLKKRTVAGLTS
VSNAAPVVSAGIFNDVESLSAGLASDASLRSESASARPSNDSSGDSGPHRRSKRFLSYPR
FVEVMLVADSKMVEHHGSNLQHYILTLMSIVSSIYKDPSIGNLINIVIVKLVILNNELDG
PVISFNAQTTLKNFCIWQQSQNILDDNHHSHHDTAILITRQDICRARDKCDTLGLAELGT
VCDPYRSCSISEDNGLSTAFTIAHELGHVFNMPHDDSNKCKEDGVKIQQHVMAPTLNYNT
NPWMWSKCSRKYITEFLDTGYGECLLDEPVSRPYSLSQQLPGRIYSVNKQCELIFGQGTQ
VCPYMTQCRRLWCTSPEGAQRGCRTQHMPWADGTDCSAGKHCKHGLCITKEHDAAPVEGA
WGVWSPFGTCSRTCGGGIKIAVRECNRPVPRNGGMYCVGRRMKFRSCNSEPCSKQKKDFR
EEQCAAFDGRHFNINGLPPNVRWVPKYSGILMKDRCKLFCRVAGSTAYYQLRDRVIDGTP
CGPDTNDICVQGLCRQAGCDHVLNSKARRDKCGVCGGDNSSCKTVAGTFNIVHYGYNEVV
RIPSGATNIDVRQHSYSGKPEDDNYLAISNSRGEFLLNGEFVVSMFKREIKVGNAVIEYS
GSDHVIERINCTDRIEEEIIVQVLSVGNLYNPDVRYSFNIPIEDKPQQFFWDAYGPWQEC
SRLCQGERKRKILCSRESDRVVVSDQRCHGTARPAVITEPCNTECELRWHVARKSECTAQ
CGLGYRTLEIYCAKISRADGKTQKVDDRYCSSQRKPDDKESCHGDCNPGGWEYSPWSECS
KSCGGGTRRRGAVCRKAAEAGGDESKCSQRDKMTVQPCNEFLCPQWKTGEWSECLVTCGK
GYKHRQTWCQFGEDRLDDRFCGSSKPDSVLTCQQQECASWQVGPWGQCTTSCGPGYQMRA
VKCVVGSYGAVMDDTECNAATRPTDTQDCELAQCPSSHPVPPGTKVPSHQGHKTQWRFGS
WTQCSASCGKGTRMRYVSCRDNQGGVAEESACAHLPKPPAREVCSVVACGQWKVLEWTAC
SVTCGQGKTTRQVLCVSFSDQEVNTSECDLDDRPSTEQDCAMSQCPSRSSESRPFPSSPN
GSTRNNLPRSQSHQWRTGPWGACSSTCAGGFQRRVVVCQDENGYPANSCEDRSRPNEQRS
CESGPCPQWIYGNWGECTKPCGGGIKTRLVVCQRPNGERFNDLSCEIHDKPPDREQCNTQ
PCPSSPNWSADPWSSCSASCGRGFKSRKVGCATGSGRLVPEENCQHLSPKPSKQRRCRGG
RCLKWKTGKWGECSASCGDGVRQREVFCPVGDRRSPLETGCSQRSRPASSQSCRVADCPS
RYRWREGDWQTCSKSCGAGHRRQALQCVDHNQQEVHEMYCVNQIRPPDIESCNTHACELI
WITGEWTECSASCGQGYHRRLISCSEVHVENDNYEYGHQSLSNCPGTPPESYMPCNLDPC
PPPQEWRVGIWGPCSVSCGDGVMERTVQCVSADGQQSNRCSQDAMPEAREVCRNPSCHLP
SSCQDVLSMNGPFPESEHILNIQGKALKVYCAGMQTETPQEYITLTTGEGENFSEIFGFR
LNDPTQCPANDSRREDCDCRRDYTAAGITTFSKVRLDLSKMDIITTDWQFAVTREGKSVP
FATAGDCYSAARCPQGRFRINLSGTGFKVAEDSSWISQGNYAVADVQKSQDGSRVSGMCG
GYCGKCTPSSGSSLPVTVE
NT seq
5820 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtgctcttctggggcttggggttcctactattccctgatttcttgaatgtggtc
gcatctacggggaaattgcttttgagttcaagcacagtaaaacaggagatcggcgcttat
gagattgtaacaccggtccgagtgaatgaagccggtgacaagtttccaaccagtgtgcac
tttaagaggaaaagacgaagtttggaggagagccccgggaatactacggatcactgggcc
tcgccgaatatccactacaggatatctgctttcggacagcattatcacctcaacctcacg
ctggattcgggatttatcgcacctctctacacggtgacagtgcttggagtgccccgagga
gataacgtaacggattttgcaacagatggggaggaggaggaggaggaggacacggagtta
aggcactgcttctataaaggactcgtaaatgcacaagcggaacacgccgcggtcatcagt
ttgtgctccggactgcttggcactttcaggtccccaggaggggagtattttgtggagccc
cttcacagctatcaaggagaacaatatgaagaggaacacacaaaacctcatattgtatac
aggaagcatgcatccaagaaacagacatctgaggagaactcagcttgtgacacttcagga
cacaaacacagatataagagacacaagcttaagaaaaggacagtggctgggttgacctcc
gtctccaatgcagctcctgtggtcagcgctggtatattcaatgacgtggagtcactgagt
gccggcctggccagtgatgcttcgctcagatcagagagcgccagtgccagaccgtcaaat
gacagcagcggtgactcaggacctcacaggagatcaaagcgcttcctctcctacccgcgc
ttcgttgaagtcatgctggtggccgacagcaaaatggtggagcatcacggcagcaacctg
cagcactacatactcacattaatgtccatagtatcttccatctacaaagaccccagcatt
ggcaatctgatcaacattgtgattgtaaagttagtcatattaaacaacgagctggatggt
ccagtcatttcattcaatgcacagaccactttaaaaaacttctgcatttggcagcagagc
cagaacatcttggatgataatcaccattcccatcacgacacagccatcttgatcaccagg
caggacatttgcagagcaagggataagtgtgacaccttaggacttgcggagttggggacg
gtgtgtgatccatacaggagttgcagtatcagcgaggacaatggactcagcactgcattc
accatcgcccatgaactcggccatgtgttcaacatgccccatgatgacagtaacaagtgt
aaggaagatggggttaagattcagcaacatgtgatggctcccacactgaactacaacaca
aacccttggatgtggtccaagtgtagcaggaagtacatcacagagttccttgacacagga
tatggtgaatgcttactggacgagcccgtttctaggccgtacagtctctcacagcagctg
cctggacggatatacagtgtcaataaacagtgtgaattgatatttgggcagggaacacag
gtgtgcccttatatgacccagtgtcggaggttgtggtgcaccagtccagagggcgcccag
cggggctgcaggacccagcacatgccatgggcagacggcactgactgctctgctggaaag
cactgcaaacacggcctgtgtataacaaaagagcatgacgctgcacctgtggagggggcc
tggggagtttggagccctttcggtacctgttcgcggacatgcggaggaggcatcaagatc
gccgtgcgagaatgcaaccgacccgtgcccaggaatggaggaatgtattgtgttggtcgc
cgaatgaagtttcgttcctgtaactctgagccctgctccaagcagaagaaagacttcagg
gaggagcaatgtgcggctttcgatggcaggcacttcaacatcaacggtctacctcctaat
gttcgctgggtgccaaaatacagcggaattctgatgaaggacaggtgtaagttgttctgc
agggtggcaggcagcacagcctactatcagctcagggacagggtcatcgatggcacaccg
tgtggacccgataccaacgacatctgtgtccagggcctgtgcaggcaagcgggctgtgac
catgtattgaactctaaagccaggagggacaagtgtggcgtttgtggaggtgacaactct
tcctgcaaaactgttgcaggcaccttcaacatcgtccactatggctataatgaagttgtg
cgaatacccagtggtgctacaaatatagatgtgcgccaacacagctactcagggaaacca
gaggatgacaactacctcgccatatcaaatagccgtggagagttcctgcttaatggagag
tttgtggtcagtatgttcaaaagggaaatcaaagtaggaaatgccgtcattgaatacagt
ggctctgaccatgtcattgagaggatcaactgcactgaccgcatcgaggaggagatcatt
gtccaggtgctgtctgtggggaacctttacaacccagatgtcaggtactcctttaacatc
cccatagaagacaaacctcagcagttcttctgggatgcctatgggccctggcaagagtgc
agccgcctgtgccaaggagagcgcaaacggaagattctctgtagcagagagtcagacagg
gtggtggtctcagaccagaggtgtcacggcacagctagacctgctgtcatcactgagccc
tgtaacactgaatgtgaactcaggtggcacgtggcccgtaagagtgagtgcacagctcag
tgcggcctgggatatcgtaccctggaaatatactgtgccaaaatcagccgtgcagatggt
aaaacccagaaggttgatgaccgctactgtagcagtcagcgcaaacctgatgacaaggaa
agttgccatggagactgtaaccctggtggctgggagtactccccgtggtcagagtgctcc
aagagctgtggtgggggcacccgccggcgaggagcagtgtgtcgaaaggctgcagaggct
ggcggcgatgagagcaaatgcagtcaaagggacaagatgaccgtccaaccctgcaatgaa
ttcctctgtccacaatggaagactggcgagtggtccgagtgccttgtgacatgcgggaaa
ggctataagcaccgtcagacgtggtgtcagtttggtgaggaccgtttagacgaccgcttt
tgtggctcatctaagcctgactcggtgctgacgtgccagcagcaggagtgtgcctcttgg
caggtcggaccatggggacagtgcactacctcatgtgggccaggctaccagatgcgagcg
gtgaagtgtgtagttggctcttatggtgctgtcatggatgacactgaatgtaatgctgcc
acccgtcccactgacacccaggactgtgaactggcccagtgtcccagcagccaccctgtt
cccccagggactaaagtcccttcccaccagggccacaaaacccagtggaggtttggttct
tggacccagtgtagtgccagctgtggcaaagggacacgcatgcgctacgtgagttgtcgg
gacaaccagggtggtgtggcagaggagtcggcgtgcgcccacctaccaaaaccccctgcc
agagaagtgtgctcagtagttgcctgcggacagtggaaggtgctggaatggacagcgtgc
tcagtcacctgtggccaggggaagacgacacggcaggtactgtgcgtcagcttcagtgac
caggaagtgaatactagcgagtgtgacctagacgatcgtccttccacagagcaggactgt
gctatgtctcaatgcccgtcccgctccagtgaatcccgacctttcccgtcctcaccaaat
ggcagcaccaggaacaacctgccccgcagccaatcccaccaatggcggactggaccctgg
ggcgcgtgctccagcacatgtgcaggaggtttccagcggcgtgtagtagtgtgccaggat
gagaacggctaccctgccaacagctgtgaggatcgcagtcggcctaatgagcagcgatcc
tgtgagtcagggccatgtccacaatggatctatggcaactggggagagtgcaccaagcca
tgcggaggtgggataaagacgaggctggtggtgtgtcagcgtccaaacggcgagcgtttc
aatgacctgagctgcgagatccatgacaagccaccagatcgtgagcagtgcaatactcag
ccgtgcccgtctagccccaactggagcgcagacccatggagctcgtgctccgcctcctgt
ggaagagggttcaagtcgcgcaaggtgggctgtgcaaccgggtcgggtcgcctcgtgccg
gaggaaaactgccagcatctgtcccccaaacccagcaagcagaggcgctgcagaggtggc
cgatgtctcaagtggaagactggcaaatggggagagtgttcagcatcgtgtggcgacggc
gtccggcagcgggaggtgttctgcccggtcggggaccgacggagcccgctggagaccggc
tgttcccagcgctcccgaccggcgtccagccagagctgccgggtcgctgactgcccctcc
cggtaccggtggagggaaggagactggcagacgtgcagtaagtcttgtggagcgggccac
cgacgacaggccttgcagtgtgtggaccacaaccagcaagaggtccatgagatgtactgt
gtgaaccagatcagacctccagacatagaaagctgtaacacccacgcctgtgaattgatc
tggatcacaggggaatggactgagtgctcagccagctgtggacagggctaccaccggcgt
ctgatctcctgcagcgaggtgcatgtggagaatgacaactatgagtacggccatcagtct
ttgtctaactgccccgggaccccccctgagagctacatgccttgtaatttggacccgtgc
ccgccgccacaggagtggagggtcggaatctggggaccgtgttcagtgagctgtggtgat
ggagtgatggagaggacggtgcagtgtgtgtcagcagatggtcagcaaagcaataggtgt
tctcaagacgccatgccagaggccagagaagtctgcagaaatccaagctgccatctgcct
tctagctgtcaagacgtcctgagcatgaacggcccgttcccagagagcgaacacattctc
aatattcaaggaaaggcactcaaggtctactgtgcaggaatgcagacagagactccacag
gagtacatcaccttgacgacgggagaaggggagaatttttcagagatctttggcttcaga
ctcaatgaccccacccagtgtccagccaatgactccagaagagaggattgtgactgtaga
agagactacacagccgctggcatcaccaccttctccaaagtccgcctggacctcagcaag
atggacatcatcactacagattggcagtttgctgtcacccgagagggcaagagtgttcca
tttgctacagctggagactgctacagcgccgcacgctgtccacaggggcggttcaggatc
aacctctcaggaacaggttttaaggtggctgaggactcctcgtggatctctcagggcaac
tatgcagtggctgatgtacaaaaatcacaggatggcagcagagtgtcaggaatgtgcgga
ggctactgtggtaaatgcacaccgtcctctggctccagtctgccagtaacagtggagtag
DBGET
integrated database retrieval system
