Anoplopoma fimbria (sablefish): 129105255
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Entry
129105255 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1-like
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
129105255
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Gene cluster
GFIT
Motif
Pfam:
PDZ
MAGI_u5
PDZ_6
MAGI_u1
PDZ_2
WW
Guanylate_kin
DUF6288
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
129105255
NCBI-ProteinID:
XP_054472139
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Position
17:complement(4763014..4894128)
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AA seq
1346 aa
AA seq
DB search
MSKPVLKKTHWTSRVNECSVSKDSRGDLNVPLRGGAENGEFAHIGQVNEGVVLYTIGKIN
EGELLLEVENLSISGLPLYDVQTVIKNCKGPVRLKTVRQGSKLNKDLKHYLSQRFQKSSA
DHELQQTIRDNLYRHAVPCTTRAPRDGEVPGVDYNFLSVEDFLELEKSGTLLEIGTYDGN
YYGTPKPPEQPPGGKVISSSGNGGDAPLPDGLSGSLPGSQHSTPRRSKSYNDMHNAGLGP
GEQQQEDDEDLPDMNSSFTGDSSEIDDIPHSVRPYVPRKSDPPYVGRTPSPSATTESTQQ
SNSNLSHPPPEDPLGPLPDNWEMAYTENGEVYFIDHNTKTTSWIDPRCMDKPQKPLEECE
DDEGVHTEELDNDLELPPGWEKIDDPVYGVYYVDHINRKTQYENPVLEAKRRRQLEQQQP
QQPQPQSQQPPEGERYIREWIEDSALAGAPLANYAANHQETYRDPQKGPPMPNAMGQKRG
KPFFTRNRSELKGTFINTKLKKSRRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMET
GDVIVSVNDICVLGYTHAQVVKIFQSIPIGSMVNLELCRGYPLPFDPDDPNTSLVTSVAI
IDNKDPIIVNGQEASHSYDSPSSHGSQNNNIGSTNGGAPLNGLPRSHSPSAEAASDTSSQ
HGYSSDVVTLASSIATQPELITVHMEKGDKGFGFTIADSPGGGGQRVKQIVDYPRCRGLK
EGDIIVEVNKRNVQSMSHNQVVDLLSKCPKGSEVTMLVQRGVAPAKKSPKLDDYERAPPY
GDYARRQLSRKDSQNSSQHSVSSHRSAHTDSPLHPSLGPPLSESIAPPPPSQPLPGLPPQ
DSPADGTIQRKPDPFKIWAQSRSMYESRLPDFQEQDIFLWRKDTGFGFRILGGNELGEPI
YIGHIVKYGAADEDGRLRSGDELICVDGTAVVGKSHQLVVQLMQQAAKQGHVNLTVRRKT
NYAVKAEGDVPPSPASSHHSSNQAPSLTEEMGKRXPQGSQNSLNTVSSGSGSTSGIGSGG
GGGAGGSGNAVVASAVAPYDVEIRRGENEGFGFVIVSSVSRPEAGTTFAGNACVAMPHKI
GRIIEGSPADRCGKLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRIIPGDESSN
ASLLTNAEKIATITTTHTAQQQAAPEARNNTKPKQESYEFKAPPGPPPQPPTQVSAQDAE
FYSVDLERDNKGFGFSLRGGREYNMDLYVLRLAEDGAAVRNGKMRVGDEILEINGESTKG
MKHARAIELIKSGGRRAHLVLKRGDGSVPEYGMVVPHLTACMRNDKMGEASVLQNQTTVC
NCPPMSSGSPSHFLSFFSLGLALSPS
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaacccgtgctaaagaaaacccactggacctccagagtgaacgagtgctccgtc
tccaaagactcccgcggggacttgaacgtaccactgcgcggcggagcggagaacggagag
ttcgcccacatcgggcaggttaacgagggtgtcgtgctttacactattgggaaaataaat
gaaggagaactgctgctggaggtggagaacctctcgatttcgggattacccttgtacgac
gtacagacagtgataaagaactgcaaaggtcccgtcaggttgaaaactgtcagacaagga
agtaagctgaacaaggacctgaagcattacctgagccagcgcttccagaaatcctcggct
gaccacgaactgcagcagaccatccgagacaacctctaccgccacgccgtgccttgtaca
acccgtgccccacgtgacggagaagttcctggcgtggactacaacttcctctcagtggag
gactttctagagttggagaagagtgggaccctgttggagataggaacgtatgacggaaac
tattatgggacgcccaagccaccggagcagccccccggtgggaaagtaattagcagtagc
ggtaacggcggtgatgccccactgccagacgggctcagcggtagcctgccgggctcgcag
cactccactccccgacgctccaaatcctacaatgacatgcacaatgctggactagggcct
ggagagcagcagcaggaggacgacgaggacctccctgacatgaacagtagctttacagga
gattccagtgaaatagacgatattcctcactcagtgcgcccctacgtcccccgcaagagt
gacccgccctacgttgggagaaccccctcgccatcggccaccacggagagcactcagcag
tcaaactctaacctgagccatcctcccccggaggatcctctgggacctctgcctgacaac
tgggagatggcctacaccgaaaacggagaggtctactttatagaccacaatacaaagacc
acctcctggatagaccctcggtgcatggacaagcctcagaaacccctggaagaatgtgaa
gatgatgaaggggtacacacagaggagctggacaatgacctagaacttccaccaggatgg
gagaaaatagacgatccagtgtatggggtctactatgttgatcacatcaacaggaagacc
cagtatgagaatccggtgttggaggctaagaggcgcaggcagctggaacagcagcagcct
cagcagcctcagccccaaagccagcagccacccgaaggtgagcgctacatccgagaatgg
atcgaggattcggcgttggcaggggccccactggccaactatgctgccaaccaccaggag
acctacagggaccctcagaaaggacctccgatgcccaacgcgatgggacagaaacgaggg
aagcctttctttacccgcaaccgatccgagctgaaggggactttcatcaacaccaagctg
aaaaagagtcgtcgggggttcggtttcacggttgtgggaggcgatgagccagacgagttc
ctgcaaatcaagagcttggtcctggatggaccggccgcacttgatggcaaaatggagaca
ggtgatgtgatcgtgagcgtcaacgacatatgtgtgctaggctacacccatgcccaagtc
gtgaagatcttccagtccatcccaattggctcaatggtcaacttggagctgtgccgcggc
tacccgctgccctttgaccccgatgaccccaacactagcctggttacctcggtggccatc
atcgacaacaaagacccgatcatcgtcaacggccaggaagcctcccacagctacgactcg
ccgtccagccacggcagtcagaacaacaacatcggctcgaccaacggaggggcacccctc
aacggcctcccccgatcccacagcccctcggcggaggcggcctccgacacctcctcccag
cacggctactccagcgacgtggtcaccctggcctcatccatcgcgacacaaccggagctc
atcactgtacacatggagaaaggagacaagggcttcgggttcaccatcgccgacagcccc
ggaggcggagggcagagggtgaagcagatcgtggactacccgcgctgccgcggcctcaag
gagggggacatcatcgtggaggtgaacaagaggaacgtgcagagcatgtcgcacaaccag
gtggtcgacctgctcagcaaatgtcccaaaggcagcgaggtcaccatgctggtgcagaga
ggggtggcacctgcaaagaagagcccaaaactggatgattatgagcgggctcctccatac
ggagattacgctaggaggcaattgtcgagaaaggacagtcagaacagctcccagcacagc
gtttccagccaccggagcgcccacacagactcgcccttgcacccgtccctggggccgcct
ctcagtgagagcatcgctcccccgcccccctcccagcccctgccgggcctgccaccccag
gactccccagcagacggcaccatccaaagaaaaccggacccctttaagatctgggcccag
tccaggagcatgtatgaaagtaggcttccagacttccaagagcaggacattttcctgtgg
aggaaggacacagggttcggcttcaggatcctcggaggcaacgagctaggagagccgatc
tacatcggccacatagtgaagtacggcgcggcggacgaggacgggcgcctgcggtccggc
gatgagctgatatgcgtggacggcacggcggtggtgggcaagtcgcaccaactggtggtg
caactgatgcagcaggctgccaagcagggccacgtcaacctcaccgtgcgacgcaaaacc
aactacgccgttaaagcagagggagatgttcctccatcgccggcgtcctcccaccacagc
agcaaccaggcgcccagcctgacggaggagatggggaagcgcnacccccagggcagccag
aactccctcaacaccgtgagctccggcagcggctccacctccggcatcggcagcggaggg
ggcggaggggcgggtggcagcgggaacgccgtggtcgcctcggcagtcgccccctatgac
gtggagatccgccgcggcgagaacgaggggttcggttttgtcatcgtctcttcggtgtcg
cggcccgaagctggcaccaccttcgctggcaatgcatgtgtggccatgccccacaaaata
gggcgcatcatcgagggcagcccggcggaccgctgcgggaagctgaaggtcggcgaccgc
atcctggctgtgaacgggtgctccatcaccaacaagtcccactctgacatcgtcaacctc
atcaaggaggccgggaacaccgtcacgctacgcatcatacccggagacgagtcatcaaac
gcgtctttgttgaccaatgcagagaagatcgccactataaccaccactcacacagctcag
caacaggctgcacctgaggccaggaacaacaccaaaccaaaacaggaatcgtatgaattc
aaagcacccccgggccctcctcctcaacccccgacacaagtctcagctcaggatgctgag
ttctactcagtggacctggagcgagacaacaaaggctttggcttcagcctgcggggaggc
agagaatacaacatggacctgtacgtgctgaggctagctgaggacggagcagctgtccgc
aacggaaagatgagggtcggcgatgaaatcctggagatcaacggcgagagcaccaagggc
atgaagcacgcgcgagccatcgagctcatcaagagcggaggccgccgcgcccatctggtg
ctcaagaggggtgacggctctgtgcctgaatatgggatggtcgttccccatctcactgca
tgtatgagaaatgacaagatgggggaggcctctgtcctccaaaatcagaccacggtttgt
aactgtcctcccatgtcgtctggctctccctcccacttcctgtctttcttttctctcggt
ctcgctctttcgccatcctga
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