Anoplopoma fimbria (sablefish): 129105337
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Entry
129105337 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein Musashi homolog 1-like
KO
K14411
RNA-binding protein Musashi
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129105337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129105337
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
129105337
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_PARP14_1
PHM7_cyt
Nup35_RRM_2
NID
Motif
Other DBs
NCBI-GeneID:
129105337
NCBI-ProteinID:
XP_054472266
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All DBs
Position
17:3587370..3610258
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AA seq
348 aa
AA seq
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MDTEGSQSSLSSGTDNXPHDPCKMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTK
RSRGFGFVTYAEQAGVEKVLAQNRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSV
NTTIEDVKHYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKM
VECKKAQPKEVMTPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQTATYTSRSYSGIAPG
YTYQFPEFHLERTPLMTSSHHPELAAIPLTAYGPMAAAAAAVRGSTPSRTAGFLGTSSPG
PMAELYAAANQDSGVSSYISAASPAPSTGFGHGLGGPLIATAFTNGYH
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggatacggaagggagccagagcagcctgtcctccggcacggacaacntcccccacgac
ccctgcaaaatgttcatcgggggtctgagttggcagacaacacaagagggattgaaggag
tacttctgtaaatttggcgaggtgaaggagtgtatggtgatgagggatcccgttaccaag
cggtcgagggggtttgggtttgtaacatacgcagaacaagccggtgtggagaaggttttg
gcgcaaaacagacatgagctggattccaaaacgatcgacccgaaggtggcgtttccacgt
cgggctcagcctaagctggtgaccaggacaaagaagatctttgtcggaggactgtcagtc
aataccaccatcgaagatgtgaagcattacttcgaccagtttggaaaggtcgatgatgcc
atgcttatgtttgacaaaacaaccaacagacacagaggctttggatttgtcacctttgag
aatgaagacgttgtggagaaagtgtgtgagatccacttccatgagatcaacaacaaaatg
gtggagtgtaagaaagcccagcccaaggaggtgatgacgccgacaggttcagccagaggc
cgctccagagtgatgccctatgggatggatgccttcatgctgggcatcggcatgctgggc
tacccaggtttccagactgctacctacactagccgcagttactctggaattgctcccggt
tacacttatcaattcccagaattccatttagagaggacccccctcatgacatcatcccac
catcctgagctggcagccattcccctgactgcttatggaccaatggcagcagccgctgca
gcagttagaggctccaccccttcacgcacagctggtttcctgggcaccagcagccctgga
ccaatggctgaactgtatgctgcagccaaccaggactcaggagtcagcagctacatcagc
gccgctagccccgcccccagcacagggtttggtcacggtctagggggccctctgattgct
actgcattcactaatggctaccactga
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