Anoplopoma fimbria (sablefish): 129105357
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Entry
129105357 CDS
T09102
Symbol
polr2j
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03020
RNA polymerase
afb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129105357 (polr2j)
09124 Replication and repair
03420 Nucleotide excision repair
129105357 (polr2j)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afb03021
]
129105357 (polr2j)
03400 DNA repair and recombination proteins [BR:
afb03400
]
129105357 (polr2j)
Transcription machinery [BR:
afb03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
129105357 (polr2j)
DNA repair and recombination proteins [BR:
afb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
129105357 (polr2j)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
129105357
NCBI-ProteinID:
XP_054472308
LinkDB
All DBs
Position
17:27803188..27805236
Genome browser
AA seq
117 aa
AA seq
DB search
MNAPPAFESFLLFEGEKKISISKDTKVPNACLFTLNKEDHTLGNIIRAQLLKDPQVLFAG
YKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaccgccagccttcgagtcgttcctcctgttcgaaggggagaagaagatcagc
atcagcaaggacaccaaggtgccgaacgcctgcctgttcacgctgaacaaagaagaccac
acgctggggaacatcatccgagctcagctgttaaaggatccgcaggttctgtttgctggt
tataaagttcctcatcctctcgaacacaagatcgtcatcagagtgcagaccacacctgac
tacagtccacaggaagcttttacgaacgccatcacggatctcatcagcgagctgtctctg
ctggaggaacgcttcagagtcgccatcaaggacaaacaggaagggatcgagtga
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