Anoplopoma fimbria (sablefish): 129105360 Help Entry 129105360         CDS       T09102                                  Name (RefSeq) aggrecan core protein-like   KO K06792   aggrecan 1 Organism afb  Anoplopoma fimbria (sablefish) Brite KEGG Orthology (KO) [BR:afb00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:afb00535]     129105360    00536 Glycosaminoglycan binding proteins [BR:afb00536]     129105360    04091 Lectins [BR:afb04091]     129105360 Proteoglycans [BR:afb00535]  Extracellular matrix (ECM) proteoglycans   Aggrecan / versican family    129105360 Glycosaminoglycan binding proteins [BR:afb00536]  Hyaluronan   Extracellular matrix or blood plasma proteins    129105360 Lectins [BR:afb04091]  C-Type lectins   Lecticans    129105360 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Xlink Lectin_C Sushi EGF V-set hEGF I-set Motif Other DBs NCBI-GeneID:  129105360 NCBI-ProteinID:  XP_054472314 LinkDB All DBs Position 2:3657976..3672275 Genome browser AA seq 1476 aa AA seqDB search MIRRIVLLSVCLHAISAAFDYISTDPEDVLSVSIPLEEPQRPLLGDTLVLPCYFEDHTIP DPGAPTIAPLVHRIKWSLVTKEKVTTILVALEGEVRISETYLDRVHLVGYPSTSTDASIK ISELRSSDTGVYRCEVQHGIEDSHDVVHVQVQGMVFHYRAIMGRYTLTFEKAKAACAQNS AVVASPEQLQAAYDGGFHQCDAGWLSDHTVRYPIHDPRVNCYGDKEELPGVRTYGVRDLN ETYDVYCYTEKMTGRVFYTASAEKFTYSEAVVACSNQGAQLATTGQLYLAWQGGMDVCNA GWLGDRSVRYPINIRRPQCGGGLLGVRTVYLHTNQTGYPLPESRYDAFCYTESPDGEGSG ITEEGSAMLSVTTVTQHPEVFFRPTTTESEAVGEVESQRPTVVDFAYTESPTELPLPQPP NVTEFVIDLIEPVTARPDVGREPSRGFVTPPTGVVFHYRLASSRYTFTFVQAQMACQKIG ASIATPEQLQAAYEAGYHQCDAGWLLDQTVRYPIVFPRDKCAGDLGDQPGVRSYGLRPAD EKYDVYCYINGQKGEVFHVGSAEGFTHDEAASSCKEHNAVLASTAELYAAWKTGLDKCRA GWLLDFSVRYPINNPRPGCGAGKSGVHTVYAHPNQTDFPDLDSRFDAYCFRAVPSIVPPI PVETSGSGSGSGSADFGSGSAVDGASGGHSGDLSGSGDLSGSGDQGISGDLSGSGDGLTS GDLSASGDLSGSGDQVTSGDKAGSGDLSGSGDLSGSVDLSGSGHLSGSGDLSGSVDLSGS GDLAGSAITELPSGESGLSSTDSSGSALSGDGSGISVVFSGIDSISSGEGSASGGLQEAG EGSTEIFIFPSSEAGSGGLSGSGDLSGSGSGSGFSSGSSGSSIGGSGESGQFSGMSSGFI TGQDFTGFSGFPSGFSSGSASGHSGDPSGSGDAQIVLIDGELIDASNPFTHKEHELGGGP LMFSGSGDISGSGILSGSASGSGSGFFPGVTFVGSGFTDLTVSASGEQEASGFSGQGSGG HLSGFGSSSFISGSGLEMLGSGMSGSGMSGSGMSESSTSGEEGSVTFVSGDFLTEVSGAT TLSMELGQGSVEFSGAGSSSSSSGFYSGSGDTSPSTTSGSGASSGDLPQVVLPSPSSEWA STESTTGPEEALKGGELSQTPGLAAPPTATTPASVPTTGVTEETHPVKGGLNPCEPNPCG AASCTVEEGVALCHVSPAPTFLAEVDVCHPNPCANGATCVESADSYKCLCLPSYGGQRCE IDEQQCEDGWTKFQGNCFLHFSDREMWLDAEQRCRDLNAHLVSIITPEEQDFVNSNAQDY QWIGLNDKTVENDFRWIDGTPLQYENWRPNQPDNYFHSGEDCVVMIWHESGQWNDVPCNY HLPFTCKKGPVSCGAPPEVENTHMFGNRREEYPVNSIIRYQCSSGFTQRHPPTVRCQADG QWEKPQVQCTDPVTVKSRKRIERRSSRRLAAGSKLH NT seq 4431 nt NT seq  +upstreamnt  +downstreamnt atgatacggaggattgtgttgctatctgtgtgtttacatgccatctcagcagcatttgat tacatttccacagacccggaggatgtgctgagtgtgagcattcctctggaggagccacag cgtcctctactgggagacactttggttctaccatgttactttgaggaccacaccatccca gacccaggagctccaaccatcgctcccctggttcatcgcatcaaatggagcctcgtcacc aaagagaaagtcacgactatcttagtggccttggagggagaggtgcgtatcagcgagacc tacctggacagagttcatctggtgggctacccctcgacttccaccgacgctagcatcaag atatccgagcttcggtccagcgacacaggagtctaccgctgtgaggtccagcacggcatc gaggacagccacgacgtcgtccatgtgcaggttcaaggtatggttttccattaccgggcc atcatgggccgctacactttgacttttgaaaaggcgaaagcagcatgcgcccagaacagt gccgtcgtggcttcacccgaacagcttcaagcggcctacgacggcggattccaccagtgt gacgccggctggctctctgaccacacagtcaggtacccgatccatgatcctcgtgtgaac tgctatggcgacaaagaggagcttcctggggtccggacatacggagtgagggacctcaac gagacctatgacgtctactgctacactgagaagatgacaggcagagttttctacaccgct tctgcagaaaagttcacctactccgaggcggtggtggcgtgctccaatcagggagctcag ctggccactactggtcagctctacctggcctggcagggcgggatggatgtctgcaacgcc ggctggctgggagaccggagcgtacgctacccgatcaacatccgtcggccgcagtgtgga ggtggtctgctgggggtgcgaactgtttacctccacacaaaccagacaggatacccactt cctgagtcccgatatgacgccttctgctacacagagtcccccgatggggaaggttcaggc atcacagaagagggaagcgccatgctgagtgttaccacggtgacacaacacccagaggtg ttcttcaggcctacgaccacagagagcgaggcggtgggagaggtggagtctcagcggccc accgttgtggacttcgcgtatacagagagccctaccgagctgccgctgcctcagccgccg aacgtcaccgagttcgtcattgacctgatagaaccagtaaccgctcggcccgatgtaggc agagagcccagcagaggctttgtgacgcctccaactggtgtggttttccattatcgctta gcgtccagccgctacaccttcaccttcgtccaggcccagatggcctgccagaagatcgga gcctccatcgccacgccagagcagctgcaggccgcatacgaggctggatatcaccagtgt gatgcaggatggttactggaccagactgtaaggtatcccattgttttcccacgagataag tgtgctggagatctgggggatcaacctggcgttcggtcatatggtttgaggccggcagac gagaaatatgatgtgtactgctacattaatgggcaaaaaggtgaggttttccacgtgggc tccgctgagggtttcacccatgatgaggctgcttccagctgtaaagagcacaacgccgtg ctggcttccaccgcagagctctacgcagcctggaaaacaggtttggacaagtgccgcgct ggctggctcctggatttcagcgtccgctatcccatcaacaacccacgccccgggtgtgga gctgggaaatcaggagtgcacactgtgtacgctcacccaaaccagaccgacttccctgat cttgattccagattcgatgcatactgtttcagagctgttccttccatcgtccctcctata cctgtggagacttcgggctctggctctggctctggctccgcagactttggctcagggtct gcggttgatggtgcctctgggggtcactctggagacctgtctggatctggggatctgtct ggttctggagaccaggggatttctggggatctgtctggttctggagacgggcttacctcg ggagatctgtctgcctcgggagacctgtctggttctggggatcaggtcacctcaggagat aaagctggttctggagacttgtctggttctggagacttgtctggatctgtagacttgtct ggatctggacacctgtctggctctggagacttgtctggatctgtagacttgtctggttct ggagaccttgccggcagtgccattactgagctgcccagtggagaatctggtctcagcagt acagattcttctggatcagctctcagtggagacggatccggcatcagcgttgtattttcg ggcatcgacagcatttcctctggagagggctcggcttcaggaggactccaagaagctgga gagggaagcacggagatctttatcttcccttcatctgaggcgggctctggagggctcagt ggtagtggggacttgtctggatctggatctggatctggtttcagctctgggtcgagtggc tcttccataggcggctctggggaaagtggacaattctccggaatgtcgtccggtttcatc accggccaggacttcactgggtttagtgggttcccatcaggattctcctctggaagtgct agtggacactcaggagacccttctggaagtggagacgcacagatcgtactgattgatggt gaactgatcgatgcctccaacccttttacccacaaggagcatgagcttggcggaggccct ctgatgttcagtggctctggagacatttcaggatctgggattctcagcggatcggcctct ggaagtggctctgggttcttccccggtgtgacctttgtggggtcagggttcactgacctt acagtatcagcctctggagagcaggaggcctctgggttctctggacagggaagtggtgga catttgtctggatttggaagctcaagtttcatctctgggtctggactggaaatgttagga tcagggatgtctggatcagggatgtctggatcagggatgtctgagtcctcaacgagcgga gaagaagggagtgttacatttgtcagtggggattttttgacagaggtatctggagccact actctgtctatggagcttggacaggggtcggtggagttcagcggagcaggaagcagcagc agcagcagtggcttctactctggcagtggagacaccagtccgtccacaaccagcggatca ggagcttcctctggagatctgcctcaggtggtgctgccctctccatccagtgagtgggca tctacagagagcaccacaggaccagaggaggcccttaaagggggtgaactgtcacagacc cctggattggctgctcctcccactgcaactacaccagcctctgtgccaacgacaggtgtc actgaggaaacgcatccagtgaagggtggtttgaacccatgtgaacctaacccctgtggt gctgcctcatgcacagtagaggagggggttgctctctgccatgtgtcacccgcccccacc tttcttgcagaggtagatgtgtgccatcccaacccttgtgccaatggagccacctgtgtg gagagcgcagactcttacaaatgcttatgcctgcccagctacggaggtcaacgctgtgag atcgacgagcagcagtgtgaggacgggtggaccaagtttcaggggaactgcttcctgcac ttctcggacagagagatgtggctcgatgcagagcagcgctgcagagacctgaacgcccac ctggtcagcatcatcacgccagaggagcaggactttgtcaactcaaacgcacaggactac cagtggatcgggttgaacgacaagacagtagagaacgacttccgctggatagacggcact ccactgcaatacgagaactggaggccgaaccagccggataactacttccactctggagag gactgtgtggtgatgatctggcacgagagcggtcagtggaacgacgtgccgtgcaactac cacctgccgtttacctgcaagaaaggcccagtgtcctgtggcgccccgccagaggtggag aacacccacatgtttggtaacaggagggaggaataccccgtcaactccatcatccggtat cagtgcagctccgggttcacacagcgccacccaccgaccgttcgctgtcaggcagacgga cagtgggagaaaccccaagtgcaatgtactgacccggtcacagtgaaatccagaaagaga atagagcggaggagcagcaggcgtctggcagccggcagcaagcttcactaa

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