Anoplopoma fimbria (sablefish): 129105393
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Entry
129105393 CDS
T09102
Name
(RefSeq) ras-related protein rab7-like
KO
K07897
Ras-related protein Rab-7A
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04137
Mitophagy - animal
afb04140
Autophagy - animal
afb04144
Endocytosis
afb04145
Phagosome
afb04148
Efferocytosis
afb05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129105393
04145 Phagosome
129105393
04140 Autophagy - animal
129105393
04137 Mitophagy - animal
129105393
04148 Efferocytosis
129105393
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129105393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129105393
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afb04147
]
129105393
04031 GTP-binding proteins [BR:
afb04031
]
129105393
Membrane trafficking [BR:
afb04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
129105393
Exosome [BR:
afb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129105393
Exosomal proteins of other body fluids (saliva and urine)
129105393
Exosomal proteins of colorectal cancer cells
129105393
Exosomal proteins of bladder cancer cells
129105393
GTP-binding proteins [BR:
afb04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
129105393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
ATP_bind_1
cobW
nSTAND3
PduV-EutP
Septin
AAA_16
NTPase_1
ATPase_2
AAA_22
AAA_7
AAA_24
G-alpha
AAA_5
AAA_14
NACHT
NB-ARC
SRPRB
ABC_tran
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
129105393
NCBI-ProteinID:
XP_054472360
LinkDB
All DBs
Position
17:14433900..14442632
Genome browser
AA seq
207 aa
AA seq
DB search
MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
VVLGNKIDLENRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV
ELYDEFPEPIKLDRNDRAKPSAESCSC
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgacatccaggaagaaagtgctcttgaaagtcatcatcctgggagattccggtgttgga
aagacctcccttatgaaccagtatgtgaacaagaagtttagtaaccagtacaaagctaca
ataggagcagacttcctgaccaaggaggtgatggtggacgaccggctcgttacaatgcag
atctgggacacagctggccaggagaggttccagtctttgggtgtggcgttctatcgtgga
gcagactgctgtgtgctggtgttcgatgtgactgcacccaacaccttcaagacactcgac
agctggagggatgagttcctgatccaggccagccctcgagatcctgagaacttccccttt
gtggtgctcggcaacaagattgacttggagaacagacaggtaaccaccaaaagggctcaa
gcttggtgtcagagtaagaacaacatcccatactttgagaccagcgccaaagaagccata
aatgtagaacaggcattccagacaattgcacgcaacgccctcaaacaagagacagaggtg
gagttgtatgatgaattcccagagcctataaaactggataggaatgacagagctaaacct
tcagcagaaagctgcagctgctaa
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