Anoplopoma fimbria (sablefish): 129105411
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Entry
129105411 CDS
T09102
Symbol
rbbp5
Name
(RefSeq) LOW QUALITY PROTEIN: retinoblastoma-binding protein 5
KO
K14961
COMPASS component SWD1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129105411 (rbbp5)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
129105411 (rbbp5)
COMPASS/SET1 complex (yeast)
129105411 (rbbp5)
MLL-HCF complex
129105411 (rbbp5)
MLL3/MLL4 complex
129105411 (rbbp5)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WDR55
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_HPS5
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_LRRK2
WDR54
Beta-prop_WDR75_1st
Beta-prop_NUP159_NUP214
Beta-prop_WDR11_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
129105411
NCBI-ProteinID:
XP_054472392
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Position
17:complement(25492020..25504212)
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AA seq
561 aa
AA seq
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MNLDLLESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAK
IISAHIHPVCSLCWSRDGHKLVSASTDNIVSQWDVLSGDCDQRFRFPSPILKLQCHPRDM
DKVLVCPMKSAPVLLTLSDSKHVVLPVDDDSDLNVVAAFDRXGEYIYTGNAKGKILVLNT
NTQELVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTCGRDGEPE
PMQKLQDLVNRTPWKRCCFSGDGEYIVAGSARQHALYIWEKSIGNLVRILHGTRGELLLD
VAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKS
EPEQTGADAAEDEEVDVTTVDPIVAFCSSDEELEDYKALLYLPIAPEVEDPEENPFGPPP
DAAVQTATPEEALAGGDKKQRQPSSEGGPAKKKARTTTIELQGVPSDEVHPLLGVKGDGK
SKKKTAGRPKGSKGKDKDFPFRPKPYRGERPSFPVEALGSSGPGGGGGGGGGGMKGRAEG
GLASGSLVSQSYKQHDIGGMD
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaacctagatctgctcgaatctttcgggcagaactatccagaggaggcagatggcact
ctggactgtatcagcatggccctcacctgcaccttcaaccgctggggcaccctgctggcg
gtgggctgcaacgacgggcgcatcgtcatctgggacttcctcacacggggcatcgccaaa
atcatcagcgcacacatccacccggtctgctccttatgctggagtcgtgacggtcacaag
ctggtgagcgcctccacagacaacatagtctcgcagtgggacgtcctgtcgggagactgt
gaccagaggttccgcttcccgtcacccatcctgaaactgcagtgccaccccagagacatg
gacaaggtgctggtgtgtcccatgaagtcggccccggtcctgctcactctgtccgactcc
aaacacgtcgtcctgcccgtggacgacgactcagacctgaatgtggtggcggccttcgac
aggncgggggagtacatctacaccggcaacgccaagggaaagattctggtgctgaacaca
aacactcaggagctggtggcttccttcagagtgacaactggcaccagcaacaccaccgcc
atcaaatcaattgaatttgcacgcaagggcagctgcttcctcataaacacagcggaccgc
atcatcagggtgtatgatggcagggagatactgacgtgtgggcgagacggagagcctgaa
cccatgcagaaactacaggacctggtaaacaggactccgtggaagcgctgctgtttctcc
ggcgatggcgagtacatcgtggccggttcagccaggcagcacgccctctacatctgggag
aagagcatcggcaacctggttaggattcttcatggaaccagaggagagctgctgctggat
gttgcttggcatcctgtccgtcccattatcgcctccatctccagcggagtggtgtccatc
tgggctcagaaccaagtggaaaactggagcgcttttgctccagacttcaaagagctggac
gagaatgtggagtacgaggagcgagagtccgagttcgacatcgaggacgaggacaagagt
gaacccgagcagacaggtgcagacgcagcggaggatgaagaggtggatgtcaccactgtt
gaccccatagttgctttttgcagcagtgatgaggagctggaggactacaaagccctgctg
tacctgcccatcgcccccgaggtggaggatccagaggaaaaccccttcggccccccgccg
gacgccgcagtccagacggccaccccggaggaggcgttggccggcggcgacaagaagcag
aggcagccctcgtctgaaggaggcccggccaagaagaaggctcgcaccaccaccatcgag
ctgcagggggtccccagtgacgaggtgcaccccctactgggagtgaagggggacggcaag
tccaagaagaagacagcgggccggcccaaaggctccaaaggtaaagacaaagacttcccc
ttcaggcccaagccctacaggggcgagcggccctccttccccgtggaggccctgggcagc
tctggcccaggaggaggaggaggaggaggaggaggagggatgaagggcagggcagagggg
ggcctggcctcagggagtctggtctcgcagtcgtacaaacaacacgacattgggggaatg
gactga
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