Anoplopoma fimbria (sablefish): 129105421
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Entry
129105421 CDS
T09102
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb00260
Glycine, serine and threonine metabolism
afb00630
Glyoxylate and dicarboxylate metabolism
afb00670
One carbon pool by folate
afb01100
Metabolic pathways
afb01200
Carbon metabolism
afb01230
Biosynthesis of amino acids
afb01240
Biosynthesis of cofactors
afb04981
Folate transport and metabolism
Module
afb_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
129105421 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
129105421 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
129105421 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
129105421 (shmt2)
Enzymes [BR:
afb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
129105421 (shmt2)
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
129105421
NCBI-ProteinID:
XP_054472410
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Position
17:20174108..20196604
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AA seq
501 aa
AA seq
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MLSFALRRVARPLCQRTPVRLSVRGQQSHAATRTVDEDRPWTGQESLAEDDPEMWDLMLK
EKDRQCRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGRRYYGGAEVVDQIELLCQKR
ALESFDLDPALWGVNVQPYSGSPANFAVYTAVLKPHDRIMGLDLPDGGHLTHGYMSDVKR
ISATSIYFESMPYKLNTTTGLIDYDQMDMTAKLFRPRLIIAGTSAYARLIDYARIKKLCT
DIKAYMLADMAHISGLVAAKAIPSPFDHADLVTSTTHKSLRGVRAGLIFYRKGVRSVDKK
GKEIMFDLEDKVNFSVFPSLQGGPHNHAIAGVAVALRQTQSPMFKEYISQVLRNAKSMAT
ALLSKGYTLVSDGTDNHLVLVDLRPKGIDGARAERVLELASITANKNTCPGDKSALTPGG
LRLGAPALTSRQFKESDFVQVVEFMDEGFKIALDVKKKTGKLQDFKNFLLQDPETVARIA
NLRQHVEAFARPFPMPGFHDH
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccttcgccctgagacgagtcgcgcggccactgtgccagcgaaccccggtccgt
ctcagtgtacgcggccagcagtcccacgccgccacccgtaccgtggatgaagatcgtcca
tggacgggccaggaaagcctggctgaggacgaccccgagatgtgggatcttatgctgaag
gagaaggacaggcagtgccgcggactggagctcattgcatctgagaatttctgcagtcga
gcagctctggaagctcagggctcctgtctgaacaacaaatactctgaaggctacccgggg
agaagatactacggtggagcagaagtggtcgatcaaattgagctcctgtgtcagaaacga
gccttggagtccttcgacctggacccggctctgtggggcgtcaacgtccagccgtactcc
ggctcccccgctaacttcgccgtctacacggccgtgctcaaaccccatgaccgcatcatg
ggcctggacctgcccgacggaggacatctgacccacggctacatgtccgacgtgaagagg
atctccgcaacctcaatctattttgagtccatgccttacaagctcaatactacaacagga
ctcatagactacgaccagatggacatgacggccaagctgttcaggcccaggctcatcatc
gctggcaccagcgcctatgcccgcctcattgactacgcccgcatcaagaagctgtgtact
gacattaaagcctacatgctggctgacatggcccatattagtggcctggtggcagccaaa
gccatcccctctccctttgatcatgctgacctggtcacttccaccacacacaagtccctc
cgaggagtcagggctggcctcatcttctatcgtaaaggtgttcgctcggtggacaagaag
gggaaggagatcatgttcgacctcgaggacaaggtcaacttctctgtgttcccctcgctg
cagggtggaccacataatcacgccatcgctggtgtggctgtggcactcagacagacacag
tctcccatgttcaaggagtatatctcccaggtattaaggaacgccaagtctatggctaca
gctctcctcagcaaaggctacaccctggtatcagacgggacggacaaccacctggtcctg
gttgacctgcggcctaagggcattgacggggctcgggccgagagggtgctggagcttgcc
tccatcaccgccaataagaacacctgccccggggacaagagcgccctgactcctggtggc
ctcaggctaggtgctccagctctgacatccagacagttcaaagaatctgactttgtgcaa
gttgtcgagttcatggacgaaggtttcaagattgctttggacgtcaagaaaaagaccgga
aagctccaggacttcaagaacttccttcttcaggacccagagaccgtggctcgcatcgcc
aacctgcgccaacacgttgaagcttttgccaggccctttcccatgccaggcttccacgac
cattaa
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