Anoplopoma fimbria (sablefish): 129105437 Help Entry 129105437         CDS       T09102                                  Name (RefSeq) integrin alpha-5-like   KO K06484   integrin alpha 5 Organism afb  Anoplopoma fimbria (sablefish) Pathway afb03266   Virion - Herpesvirus afb04145   Phagosome afb04510   Focal adhesion afb04512   ECM-receptor interaction afb04517   IgSF CAM signaling afb04518   Integrin signaling afb04810   Regulation of actin cytoskeleton afb04820   Cytoskeleton in muscle cells afb05100   Bacterial invasion of epithelial cells afb05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:afb00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03266 Virion - Herpesvirus     129105437  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     129105437    04517 IgSF CAM signaling     129105437    04518 Integrin signaling     129105437  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     129105437   09144 Cellular community - eukaryotes    04510 Focal adhesion     129105437   09142 Cell motility    04820 Cytoskeleton in muscle cells     129105437    04810 Regulation of actin cytoskeleton     129105437  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     129105437   09171 Infectious disease: bacterial    05100 Bacterial invasion of epithelial cells     129105437  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:afb04147]     129105437    04515 Cell adhesion molecules [BR:afb04515]     129105437    04090 CD molecules [BR:afb04090]     129105437 Exosome [BR:afb04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    129105437 Cell adhesion molecules [BR:afb04515]  Integrins   Integrin alpha subunits    129105437 CD molecules [BR:afb04090]  Proteins   129105437 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 ITGAX-like_Ig_3 Integrin_alpha Motif Other DBs NCBI-GeneID:  129105437 NCBI-ProteinID:  XP_054472434 LinkDB All DBs Position 17:8890728..8933262 Genome browser AA seq 1065 aa AA seqDB search MGTVPALSLTRSPGERCRRASSVVPVVAVVVLVLVLAQLCAAFNLDAEDSVVFSGPRGSY FGYSVEFFGNSSSISVLIGAPKANTSQPDVTEGGAVFLCPWSQANCSMINFDKQGDRYFY INGVNTQVEFKSHQWFGATVRSHGNSILACAPRYYWRTEHDIPLADVTGTCYLSVDGLET FVEYAPCRTERHGPVGQGYCQGGFSADFTKDGRVVLGGPGSFYWQGQLISATTEEIVKAY YPSYFLLSVAGQIQTRQVQGSYDDSYLGYSVAGGEFSGDDDEDFVTGVPKGLMLYGVVSI LDGRDLKSLLNLTGEQMGSYFGYAVAATDINNDGLDDLVVGAPMFMRRGVNGRLEELGKV YVYLQRGPLLLEPSQSHLLGQQAFSRFGTSLAPLGDLNQDGFNDMAIGCPYGGDEQHGLV LIYNGHAEGLMDTPTQTLSGQWASSSFPASFGFSLRGNKDLDQNGYPDLVVGAFGVDKAV LYRARPIVSVSASLTVQPTMFNQEEKPCELITENETIGVSCVSIGFCLLANGKHLPSSRS HTHTHTHLGFVVEVQLDSVKQQQKESIRRTLFLDSQQPSLLKTLRLANGERLCHDAKIYL RGEEEFRDKLSPISISLNFSLDPHGPVDQHGLRPILNYETEQRIEQKAQIQLDCGEDNIC VPDLKLAVYGDRAEVYLGDENSLSLTFNARNEGEGGAYEAELYVVLPPEADYSGIARNNV SLAQLTCSYEAENQTRYLLCDLGNPMKSGTSLWAGLRFTVPRLKDTHRTVQFELQIRSKN VNNSESEVVLLELEVAAMADVILQGVSRPDKFIFPPPNWSVSQSLREERDIGPELQQVYE LVNNGPSVVSQTTLEVRCPLRAHGHQLLYPVEVITEGPLSCSSKHTFNALKLKLQPPAAE MKSSTEHHIQRREVYRDLLSEQGNLTCSSVECRLLQCEVGLLERGANVILTLRSRLWAET FMERAYKQYVLECSVQFKVNRMPYSIPPKFKPTGSKKVVTAVMWNKPDIPFPVPVWIIIL AILAGLLLLALLIYLLYKMGFFKRSDPYGTTMEKAQLKPQASSEA NT seq 3198 nt NT seq  +upstreamnt  +downstreamnt atgggcaccgttcctgcactttcacttacccggtcgccgggggaacgctgtcgtcgcgcc tcttcggtcgtacctgtagtggcggtggtggttctggttctggttctggcgcagctgtgc gccgcttttaacttggacgcggaggacagcgtcgttttctccggaccgcgggggagttat ttcggctattcggtggagttcttcggcaactcatccagtatcagtgttttgatcggcgcc ccgaaagccaacaccagccagcctgacgtcactgaaggaggagctgtgttcttgtgcccc tggagccaagctaactgcagcatgatcaactttgacaagcaaggtgatcgatatttttac ataaatggtgtgaacactcaggttgagttcaagtcccatcaatggtttggagccactgtg cgttcccatggaaacagcatcctggcttgtgctcccaggtattactggaggaccgaacat gatatacccttggccgacgtcacaggaacctgctacctctctgtagatggtctcgaaacg ttcgtggagtacgccccctgccgaacagaaagacacggacctgttggacagggctattgt caggggggatttagtgcagacttcaccaaggatggcagggttgtgcttggaggaccgggc agcttttactggcaaggccagctgatttcagccaccacagaggagattgtgaaggcctac tacccctcttactttctgctctcagtcgccgggcagattcagacacgacaggtgcagggg agctatgatgacagttaccttggttactccgtggctggtggcgagttcagtggggatgat gatgaagatttcgtcacaggagttccaaaaggactcatgctgtatggtgtagtgtcaata ttagatggaagggatctgaagtctctgctcaacttgacaggggagcagatggggtcctat ttcggctacgcggtggcagccaccgacatcaacaacgatggtttggatgacctggtggtg ggagctccaatgttcatgcgtcgaggggtcaatgggcgtctggaggagctgggtaaggtg tatgtgtacctccagaggggccctctgctgctggagccaagccagtcccacctgctgggt caacaggccttcagccggttcggtacgtcgctggctccgctgggtgacctcaaccaggat ggattcaatgacatggccatcggctgtccctacggaggagacgagcagcatggattggtt ctcatttataacggccatgccgaaggactgatggacacacccactcagactctctctggc caatgggcttccagctctttcccagccagttttggcttctccctacgaggcaacaaagat ctggatcaaaacggatatccagatctggttgttggtgcttttggggttgataaagcggtg ctatacagggctcggccgatagtgagcgtcagtgcgtctctcacagtgcagccgaccatg ttcaaccaggaggagaagccttgtgagctgatcacagagaatgaaaccatcggcgtgtct tgtgtcagcatcggattctgcctgctggctaatgggaagcacctcccctcatctaggtca cacacacacacacacacacatctaggcttcgtggtggaggttcagttggacagtgtgaag cagcagcagaaggagtccatcaggaggaccctgttcctggacagccagcagcccagtctg ctgaagaccctccgcctcgccaacggagaacgcttgtgccacgacgccaagatctacctg cggggcgaagaggagtttcgggacaaactctcccccatttccatcagccttaacttcagt ctggatcctcatggcccagttgaccagcatggcctcagaccaatcctgaattatgagaca gaacagcgtatagagcagaaggcccagattcagctcgattgcggagaggacaacatctgc gtccctgacctcaagctggctgtttacggtgacagagcagaagtttacctgggtgatgaa aactccttgagcctgacattcaatgccaggaacgagggagagggaggggcgtacgaggcc gagctctacgtggtgcttcccccagaggccgactacagcggcatagcacgcaacaatgtg agcttggctcagctgacgtgcagctatgaggcagaaaaccagacccgctatctcctgtgt gatctgggaaaccccatgaagtctggtaccagtttatgggccggcctccggttcactgtg cccagactgaaggacactcacagaactgtacagtttgagctccaaatacgaagtaaaaat gtaaacaactcagagagtgaggtggtgctgttggagctggaggtggctgccatggctgat gtcattctgcaaggtgtctctcgcccagacaagttcattttcccccctcccaactggagt gtgagtcagagtctgagggaggagcgggacatcgggcctgagcttcagcaggtctatgag ttggtgaataacggtcccagtgtggtcagccagaccactttagaggtgaggtgtcctctg agggctcacggccaccagctgctctaccctgtggaggtgatcactgaggggccgctcagc tgctcctccaaacacaccttcaatgcactgaaactcaagctccagcctccagcagcagag atgaaatccagcactgagcaccacatccagaggagggaggtgtacagagatcttctgtct gaacaaggaaacctgacgtgctcctcagtggagtgcaggctgctgcagtgtgaggttggg ctgctggagagaggggccaacgttatcctgactctacgctccagactgtgggctgagacc ttcatggagagggcctataagcagtatgttctggagtgttctgtccagttcaaggtgaac aggatgccttattctattcctccaaaattcaagccaacaggatccaaaaaggtggtgacg gctgtgatgtggaacaagccggacattccgttccccgttccagtgtggatcatcatcctg gctattctggctgggttgttattactcgccctgctcatatatctgctatacaagatgggc ttctttaaaaggtcagatccgtacggcaccaccatggagaaggcccagctcaaaccccag gcgtcctctgaagcctag

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