Anoplopoma fimbria (sablefish): 129105488
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Entry
129105488 CDS
T09102
Name
(RefSeq) retinoic acid receptor gamma-like isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129105488
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
afb03310
]
129105488
Transcription factors [BR:
afb03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
129105488
Nuclear receptors [BR:
afb03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
129105488
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Ribosomal_60s
RNA_pol_3_Rpc31
Motif
Other DBs
NCBI-GeneID:
129105488
NCBI-ProteinID:
XP_054472515
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All DBs
Position
17:348631..383584
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AA seq
494 aa
AA seq
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MATNREHQVRHMAGFPRAMYPFTFNSMRSHSPFDLLASSHLFGRFGADLPKEMAALSVET
QSTSSEEMLPSSPSPPPPPRIYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYT
CHRDKNCQINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKEEVVLPDNYELSG
ELEELVKKVSKAHQETFPSLCQLGKYTTNSSADHRVQLDLGLWDKFSELSTKCIIKIVEF
AKRVPGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGF
GPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPQKVDKLQEPLLEALKIY
TRRRRPNKPHMFPRMLMKVTDLRGISTKGAERAITLKTEIPGPMPPLIREMLENPEAFED
SSDSGDSAAAAPPAIQAIKQEEKATDESAVEEEEEEDDDDYWDEEKERGADSDGELLGEA
AAGVQKKGVTGKTQ
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaacagggagcaccaagtgcgtcacatggccggcttcccccgagctatgtac
ccgttcacctttaactccatgcggagccactccccctttgacctgctggccagtagccac
ctcttcggccggtttggggcagaccttcccaaagagatggctgcattgtcggtggagacc
cagagcaccagctcagaggagatgctccccagctctccttctcctcctcctcctccccgg
atctacaagccttgctttgtttgccaggacaaatcatctggttatcactatggagtgagc
tcctgtgagggctgcaagggtttctttcggcgcagtatccaaaagaacatggtgtatacc
tgccacagagacaagaactgccagatcaacaaagtgacccgcaaccgctgccagtactgt
cggctgcagaagtgctttgaggttggcatgtccaaagaagcggtgcgtaacgacaggaac
aaaaagaagaaggatgtaaaggaggaggtggtgctgccagataactatgagttgagtgga
gaactggaggagctggttaaaaaagtcagcaaagctcaccaagagacctttccatctctg
tgccagctaggaaaatacaccacaaattcaagtgctgaccacagagttcagctggacttg
ggcctgtgggataaattcagtgagctgtccactaagtgcattataaagattgtggagttt
gcaaagcgggtaccaggcttcactacgctcaccatcgctgaccagatcaccctcctcaaa
tctgcatgtctggacatcctgatgctgaggatatgcactcgctacaccccagaacaggac
acaatgaccttctcagatggcctgacactgaacaggacccagatgcataacgctggcttt
ggcccactcacagacctggtgtttgcctttgctggccagctgctgcctttggagatggat
gacacagaaacaggcctactcagcgccatctgcctcatctgtggagaccgtatggatctg
gaggagccacagaaggtagacaagctgcaggagccactgctagaggctctgaagatctac
acccgccgcagacgcccaaacaagcctcacatgtttccccgaatgctgatgaaagtcaca
gacctccgaggaatcagcaccaaaggtgcagaaagagccatcacactaaagacggagatc
ccaggccccatgcctccactgatcagagagatgctggagaatccagaagcctttgaggac
agcagtgactcaggagacagcgccgcagctgctccccctgccatccaagccatcaaacaa
gaggagaaggccacagatgagtcagccgttgaggaggaagaggaggaggacgacgacgac
tactgggatgaggagaaagagcgaggggcagacagtgatggggagctgttgggggaggcg
gcagcgggcgtgcaaaagaaaggtgtaactgggaaaacgcagtga
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