KEGG   Anoplopoma fimbria (sablefish): 129105490
Entry
129105490         CDS       T09102                                 
Symbol
zc3h11a
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 11A
  KO
K22415  zinc finger CCCH domain-containing protein 11
Organism
afb  Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:afb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:afb03019]
    129105490 (zc3h11a)
Messenger RNA biogenesis [BR:afb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     129105490 (zc3h11a)
SSDB
Motif
Pfam: zf-CCCH_3 zf_CCCH_4
Other DBs
NCBI-GeneID: 129105490
NCBI-ProteinID: XP_054472519
LinkDB
Position
17:complement(11801713..11811063)
AA seq 969 aa
MEARAGLQADHQCRTKASMFRKDKQPRTPYHQGDTLPAVHSRGRQLLSHLSEPAAGFKVV
TSPSLPIKTQTSITMTNHGDDCYFFYYSTCAKGDSCPFRHCEAAMGSEIVCNLWQEGRCF
RTVCKFRHMEITKNRKEISCYWENQPAGCQKPYCAFFHERPRCIDGMFVPPDKSLSKTEE
QPHEEPAPSPAAPLPTAANPQIRGVIKTEAQEPVPSPTHPPVVINPADDDEDEDDQFSEE
GEDGKVGPSPRKLAKSDDSLSFGVSTLEEIRLRKALKASMKRAGYPIQSPDASANGEKEN
IQSLFRPTLYEAGDGPLIFEETGRPRGSLAERLGRKMPNNDVISGEGGPLRRGLAGRLGR
VVDEEEPLMPPQKALKPIRDRLGLPVSVASTQPEAETDRAPKNAPEQIRIKTLEEIRQEK
AAKSQSQSQKENPSAVAPEISKTKTTKGVKRAITIRDDSISHVKTVSEIPRTKKKRQEEQ
DPDPKKSQGESNTAGPDPEATNVGQVRVKTLEEIRKEKAAKIQARQTLKAENKKSSDTEN
DAKKPRLLRVKKLKSQSNVTTEKSTEVTEKPVKTPAAPETTAATSNNVKVKTFEEIMRXK
RLRKQEMEEQARESAEAEPAQKHSDEETLKRKVPAKVSLTFSGSSSPSSTTVAPDSTLST
KKLTVGKPILLKSKAASPLNSTTPGARGAAAKAATSVPVKQSSSSSEAESDSQSPSRSRE
VPDKNTSSSTALSPAQQDRAAPQGPAAQARPSNKTLINSHKTSPEHSADTKVRPKLNVKP
SVVKPAVQVKPGQKRRGAERSAVAAVKPLNSASTVLEDPQQETGCRDRQEFPSSNAEAQL
SSAVPRSPSTLLDSGSGCSPLREDLQTVPVFKQSLSQDTKQTVNVAAASEACTVPQSPVP
KTPTQPKSRRLSVAGTRTISTSSTAASTSAMDDFEELINEFTDDHLEEDVDPGIGEDDLL
QELSEMIDS
NT seq 2910 nt   +upstreamnt  +downstreamnt
atggaagccagagctggacttcaggcggatcatcagtgtcgaaccaaggcctccatgttt
aggaaagataaacaacccaggactccataccaccagggagacaccctaccagcagtgcac
tcaagagggagacaacttctcagccacctcagtgaaccagctgctgggtttaaggtcgta
acctcaccatctctgccaatcaagacgcagaccagcattactatgaccaaccatggagac
gactgctacttcttttactattccacctgcgccaaaggagacagctgcccattcagacac
tgtgaggcagctatgggaagtgagattgtctgcaacctctggcaggagggacgctgcttc
cgtaccgtctgcaagtttcgccacatggagatcacgaaaaaccgaaaggagatatcttgt
tattgggagaaccagccagccggctgccagaagccttactgtgccttcttccatgaaagg
ccgcgctgcatcgatggcatgtttgtcccacctgataaaagtctaagcaaaacagaggaa
cagccacatgaagaaccagccccctcgcccgctgcccctctccccacagcagccaatcca
cagatcagaggcgtcatcaagacagaagctcaggagccagtaccaagccccacccaccca
ccagtggtgattaatccagcagatgatgacgaggatgaagatgaccagttctcagaggag
ggagaggacggaaaggtcggtccttctcctaggaaactagctaaatcagatgactcgctg
agctttggagtcagcacccttgaggagattcggctgaggaaggctctgaaggccagcatg
aagagagctggttaccccatccagagtcctgatgcctcggccaatggcgagaaagaaaac
atccagtcattgtttcgaccaactctctacgaggcgggagatggcccactcatctttgaa
gaaactggaagaccacgagggagtttggctgaaagacttggaaggaagatgcccaacaac
gatgtgatatctggtgaaggaggcccactaagaaggggtctggctgggcgtctgggcaga
gttgtagatgaagaagagccattaatgccccctcagaaagctttgaagcctattagggac
agacttggattgccggtgtctgttgcttccactcaaccagaagctgagaccgacagggcg
ccaaagaacgctcctgagcagattcgcatcaaaacactggaggagatcagacaggagaag
gctgcaaagtctcagtcccagagccagaaagaaaatccttcagccgtggctccagaaatc
agcaaaaccaaaaccaccaagggtgtcaagagagccatcaccatcagggacgactccatc
agccacgtcaagacagtctcggagatcccccgtaccaagaagaaaaggcaggaagaacag
gaccccgaccctaagaagagccagggagagtctaacacagcgggtccagatcccgaggct
acaaacgtgggtcaggttagagtgaagacactggaggagatccgcaaggagaaggcagca
aagatccaggctcggcagaccctgaaggctgaaaacaagaagagctctgatactgagaac
gatgctaagaagcctcgcctgctgcgcgtcaagaaactcaaatcccaaagcaacgtcaca
acagagaagagtactgaagtgacagagaagccggtgaaaactcctgctgctcctgagacc
actgccgccaccagtaacaatgtcaaggtcaagacctttgaggagatcatgcggngaaaa
cgcctccgcaagcaggaaatggaggagcaggccagagagtcagcagaagcagagcctgct
caaaaacacagcgatgaagaaaccctgaagaggaaggttcctgccaaagtcagcctgacg
ttctcaggctcttcatcaccttcctccaccactgtggcccctgactctaccctttccacc
aaaaagctcaccgttggtaaaccgatcctcctcaaatccaaggctgcttcccctctgaac
agcaccactcctggtgcgaggggcgctgccgccaaagctgcgacctcagtccctgtgaag
cagagctcttcttcatcggaggctgagtccgactcacagagccccagccgctccagggag
gtcccagacaaaaacacaagcagttccaccgcactgtcaccagcccagcaggacagagcg
gctcctcagggtcccgctgcacaggcccgcccttctaataaaacactgataaatagtcac
aagacatctccagaacactctgcagacaccaaagtgaggcccaagctgaacgtgaagccg
tccgtcgtgaagcctgcagtgcaggtgaagccaggtcagaagaggaggggagcggagcga
tctgctgtcgctgctgtcaaacctctgaacagcgcctccacagtgctggaggatccacag
caggagacggggtgcagagacagacaggagttcccgtcctccaatgcagaagctcagctg
agttctgctgttccccggagtcccagcaccctgttggactcaggctccggctgcagccca
ctaagagaggacctccagactgtccccgtcttcaaacagagtctgagccaagacaccaag
cagaccgtcaatgttgctgccgccagtgaggcctgtacagtcccccaaagcccagtcccg
aagacccccactcagcccaagtcccgcagactgagcgtagccgggacccgcaccatctcc
acctccagcactgctgcctccacctcagccatggacgactttgaggagctcatcaacgag
ttcaccgacgaccacctggaggaagacgtggaccctggcatcggagaggacgacctgctg
caggagctgtccgagatgattgacagctga

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