Anoplopoma fimbria (sablefish): 129105510
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Entry
129105510 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: contactin-4
KO
K06761
contactin 3/4/5/6
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
afb04515
]
129105510
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
afb00537
]
129105510
Cell adhesion molecules [BR:
afb04515
]
Immunoglobulin superfamily
Contactins
129105510
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
afb00537
]
Others
129105510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Pur_ac_phosph_N
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
129105510
NCBI-ProteinID:
XP_054472551
LinkDB
All DBs
Position
17:8329905..8371162
Genome browser
AA seq
1025 aa
AA seq
DB search
MKMLLPWELLILLSLKECLAENTRHGPVFTQEPSDSIFPLSTDDKQVFINCKAKGNPPPH
YRWKMDGREINTQSDPNYSLVEGNLLINNPHVIDHGGVYQCIATNTFGTVVSREAKVQFA
FLQNFSRKSRNTVSVREGQAVVLLCGPPPHYGEIKYSWVFNGQQSFLQQDARRFISQKTG
NLYIAKVVASDAGNYTCVVRNMMTNSTVFSSPTPVVVRRDAVMGEYEPKIEVQFPDTLRV
SKGSSVKLECFALGNPVPSISWRRADGNPLPGKIKINHSSGVLEIPYFRPEDAGVYECVA
ANSRGRNVARGQLVFHNAEHLHWVQTLKDAHMAIDANLQWECKAMGKPRPTYKWLKNGQP
LTAEGRIHVEAGRLTISRISLLDSGMYQCVAESEHGAVYASAELKVVASPPDFTRRPVKK
STVIQRGGEVVMECRPHASPRATISWWRGGELLKDSERQTIMEDGTLRITNISTSDGGRY
TCLARNHFGTSSSTGTLLVREPTKILVPPLSLDATVGQSIVLPCEVSSDSSLSPIFKWFF
NGKAIDFSRQEHFEMIGGGFAGDLMVRNIQLKHSGKYVCMVHTEVDTVSAAADLIVRGPP
GAPEGPVVSDITDTAVQLSWGSGPDNHSPVTMYMVQARTPFSIGWQTVRTVPDSVPGQMM
HATVKDLNPWVDYEFRVVAINGVGVGEPSTPSKQIRTESAVPKVAPVNVSGGGGARGELV
ITWEPVPEEQQSGEDFGYVVAFRPLGSSTWIQTVLASPDASRYIYRNDSIAPLSQFEIKV
GVYNSMGEGPLSPVVTVFSAEEEPSEAPSRVWARAVSASEIEVYWEPIPSGSGSVKIIAY
EVLFWEEGTEQSEAETVRVIDTTALLSGLKGSTVYLISVRAQNSAGLGPRSPAFNNTTKK
PPPSQPPANIEWTLTNSKIFLNWEHVKAMENESEVTGYKVVYRQNWHGRTAVLETNKTSV
ELQIPSGEDYLIEIKALTEGGDGTSSGPIRIPKMSSLNSKCCLCPAPMRICCFMMVFFVF
FMVIF
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgctgttgccatgggaactgttaatccttctgtcactcaaagagtgcctggct
gagaatacgcgccatggtcctgtcttcacccaggagcctagtgacagtattttccccctg
agcacggatgataagcaggtgtttattaattgcaaagcaaagggaaacccacctccgcat
tataggtggaaaatggatggaagggaaataaacacgcagtcagatcctaactacagcctt
gtggaggggaacctgttgatcaataacccccatgtcatcgatcatggaggagtgtatcag
tgcatcgccaccaacacttttggtaccgttgtcagcagggaggcaaaagtccagtttgca
tttctgcagaacttcagcaggaagtcaaggaacacggtgtcggtgagagagggtcaagcc
gtggttctgctctgcggccctccaccccattacggagagatcaaatattcatgggttttc
aacgggcagcagagcttcctgcaacaggatgcccgccgttttatctctcagaagacaggc
aacttgtacatagccaaagtcgtagcctcggacgcggggaactacacatgtgtggtgaga
aacatgatgaccaactccacagtgttcagctctccaacccccgtggtggtgcggagagac
gcagtgatgggtgaatacgagccaaagatcgaggttcagtttcccgacaccctccgagtc
tctaaaggatcgtcggtgaagctggaatgcttcgccttgggaaacccggtgccttccatc
tcatggagaagagctgatggaaacccactccctggcaagattaaaatcaaccactccagc
ggggttctggaaattccatactttcgcccggaggatgccggtgtgtacgagtgtgtggcc
gcaaacagcagaggacgaaatgtcgccagagggcaactcgtattccacaatgctgaacat
ctgcactgggtccagacactgaaagatgctcatatggccatcgatgctaatctgcagtgg
gaatgtaaagccatgggtaagcctaggcccacatacaaatggctgaagaacggtcagccg
ctaacagcagagggcaggatccacgtggaggcgggtagactgaccatatccaggatcagt
cttttggactctgggatgtatcagtgtgtagctgagagtgaacacggagctgtgtacgcc
agcgctgagctcaaggttgtagcctcaccgccggacttcacccggaggcccgtgaagaag
tccactgtgatccagagggggggcgaggtggtcatggagtgccgcccccacgcttctccc
agggcaaccatctcctggtggagagggggcgaactcctgaaggacagcgagagacagaca
atcatggaggatggaacgcttcgtatcaccaacatctccacatctgacggaggcaggtac
acgtgtttggccagaaaccattttggaacatccagcagcactgggacgctgctggtcaga
gaacctaccaagattttagtcccaccattgagtttggacgccaccgtgggacagagcatt
gtgctgccatgcgaggtgtccagtgattcgtccctcagtcccatcttcaagtggttcttc
aacgggaaagccattgatttcagcaggcaggagcactttgagatgattggagggggattt
gcaggtgacctgatggtgaggaacattcagctaaagcattctgggaagtacgtgtgtatg
gtgcacactgaagttgacaccgtctcagcagcagcagacttaattgtcagaggacctcct
ggtgccccggagggcccggttgttagcgacatcactgacaccgctgtgcaactgtcctgg
ggctcaggacctgacaaccacagtcctgttaccatgtacatggtccaggcaaggaccccc
ttctccataggctggcagactgtgagaacagttcctgattctgtgcctggacagatgatg
catgcaacagtgaaagatttgaacccctgggtggattacgaattcagggtcgtggcaatc
aacggcgttggtgtgggagagcccagcacgccatcaaaacagattcgaaccgaatcagca
gttcccaaggtcgcgccagttaatgtgagcggcggcggaggagctcgaggagaactcgtc
ataacgtgggagcccgttccagaggaacagcagagcggagaggactttggctatgttgtg
gctttccgcccacttggcagcagcacctggatccagacggtgctggcatcacccgatgca
tcgagatatatctacaggaacgacagcatcgcacccctgtcccagtttgaaattaaagtg
ggagtgtacaacagcatgggagaggggccgttaagccccgtcgtcacagtgttttctgca
gaggaagagccctctgaggcgccatcgagagtttgggcccgtgctgtgtcagcctctgag
attgaagtgtactgggaaccaattcccagcgggtccggcagcgtgaagatcattgcgtat
gaggttctcttttgggaggaaggaactgagcagagtgaggcagagacagtgagggtcatc
gacaccacggctctgctttctggcttgaagggcagcacagtctatctgatctcagtcaga
gcccagaacagcgctggacttggaccccgcagccccgcttttaacaacacgaccaagaaa
ccacctccgagtcagcccccagcgaatatcgagtggaccctgaccaactctaagatcttt
ctgaattgggaacacgtcaaggcgatggaaaatgagtccgaggtgacagggtacaaggtt
gtgtatcgtcagaactggcacggcaggaccgccgtactggaaaccaataagaccagcgtg
gagctgcaaatcccctccggagaggactacctcattgagatcaaagctctgacggaaggg
ggcgatggcaccagcagtggtcccatccgcataccaaagatgtccagtcttaactcaaaa
tgctgtctgtgtccagctccaatgaggatttgctgttttatgatggttttttttgtattt
tttatggtcattttttga
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