Anoplopoma fimbria (sablefish): 129105544
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Entry
129105544 CDS
T09102
Symbol
nelfcd
Name
(RefSeq) negative elongation factor C/D
KO
K15181
negative elongation factor C/D
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
129105544 (nelfcd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afb03021
]
129105544 (nelfcd)
Transcription machinery [BR:
afb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
129105544 (nelfcd)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
DUF4817
Motif
Other DBs
NCBI-GeneID:
129105544
NCBI-ProteinID:
XP_054472595
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All DBs
Position
17:744219..751682
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AA seq
578 aa
AA seq
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MDDEYYSGGGDWEGTGEGPMDYVEGENDGKIQEDCLQKFSSRDYIMEPAIFNTLKTYFQS
GGSPEHVIQLLSENYSAVAQTVNLLAEWLIQMGVEPAQVQERVENHLKSLLIKHFDPQKA
DSIFTVEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSVS
TACQQLEVFSRVLRTSLATLLDGGEENLEKNLPEFAKMVCHGEHTYLFAQAMMSILSQEE
QGGSAVRRIGQEVQKSAHERGHDASQITLALGTAAAYPRACQALGAMLSKGALNPADITV
LFKMFSSMDPPPVELIRVPAFLDLFMQSLFKPGSKINQDHKHKYIHILAYAASVVETWKK
NKRVNINKDELKSTSKAIETVHNLCCNENKGATELVAELGTLYQCIRFPVVAMGVLKWVD
WTVSEPRYFQLQTDHTPVHLALLDEICTCHQLLHPQVLQLLIKLFETEHSQLDVMEQLEL
KKTLLDRMVHLLSRGYVLPVVGYIRKCLEKLNTDISLIRYFVTEVLDVIAPPYTSDFVQL
FLPILENDSIAGTIRTEGDHDPVAEFIAHCKSNFIMIN
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgagtattacagcggtggtggagactgggaaggcactggggagggtcccatg
gactatgtggaaggggaaaatgatggtaaaatccaggaagactgccttcagaaattctcc
agcagggattacatcatggagcctgccatcttcaacacccttaaaacgtatttccaatcg
ggtggctctccagaacacgtcatccagctgctttctgaaaactactctgctgtggctcag
accgttaatctgctggccgagtggctcatccagatgggtgtagagcccgctcaggtccaa
gagcgagtagaaaatcacctcaaaagtctcttgataaaacactttgacccccaaaaagct
gactccattttcactgttgagggagagacgccagcttggctcgagcagatgatagcacac
actacgtggagagatcttttctataaactggcagaggctcacccagactgcctgatgctc
aacttcactgtaaagctcatttcagatgcagggtatcagggtgagatcaccagtgtgtcc
acagcttgtcagcagctggaggttttctcccgagtattgaggacatctttggctacgctg
ctggatggaggagaagaaaacctggagaagaacctgccagaatttgctaagatggtgtgt
cacggcgagcacacctacctctttgcccaggcgatgatgtccatcctctctcaggaggaa
caaggcggttcagctgttcgaaggatcggccaggaggtgcagaagtcagcgcatgagaga
ggtcacgatgccagtcagataaccctggcgctcggcacagcagcagcctaccctcgagcc
tgccaggcgctcggtgccatgttgtccaaaggagccctaaatcctgcagatatcacagtt
ctgttcaagatgttcagcagcatggacccgccgcctgtggagctgatcagagtgcctgcc
tttctggacttgttcatgcagtcgctgtttaagccgggatcaaagataaaccaagaccat
aaacacaaatacattcacatcttggcctacgctgccagtgtggttgaaacgtggaaaaag
aacaagcgagtcaacatcaataaagatgagctgaagtcgacgtccaaggccatagagacg
gtgcacaacctgtgctgcaacgagaacaaaggagccacggagctggtggctgaactcggc
actttgtaccagtgcatccggtttccggtagttgctatgggggttttgaaatgggtggat
tggacagtgtctgagccgcggtacttccagctgcagacagaccacactccagtacattta
gctttgttggacgagatctgtacgtgccaccagctgctacacccgcaggtcctccagctg
ctcatcaagctttttgagacggagcattctcagctggacgtcatggaacagctggagttg
aagaagactctgctggatcgaatggttcacctgctgagccgtggctacgtccttccagta
gttggttatattcgcaagtgtctggagaaactcaacacggacatctccctcattagatat
tttgtcactgaggtgctggatgtgatcgcacctccctacacatcagactttgttcagctc
ttcctgcccatcctggagaacgacagcatcgcaggaacgatccgcacagagggagaccat
gaccctgtagcagagttcattgctcattgcaagtcaaacttcatcatgataaactga
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