Anoplopoma fimbria (sablefish): 129105584
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Entry
129105584 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129105584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129105584
Membrane trafficking [BR:
afb04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
129105584
Endosome - Golgi transport
Arf GTPase associated proteins
129105584
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
129105584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
SAM_1
RA
SAM_2
PH_11
PH_6
PH_8
PH_3
PH_9
Motif
Other DBs
NCBI-GeneID:
129105584
NCBI-ProteinID:
XP_054472701
LinkDB
All DBs
Position
1:complement(10810488..10856331)
Genome browser
AA seq
1618 aa
AA seq
DB search
MLHLQTVMSQSESCSTVWDWLCVLRLEQYSEAFRSAGLATLPQCCNLTPDQLERMGITLP
GHQRRILASLNKTHGNNETQSDTHSHHLQSERDQRLEETGHPKVLPRGRPVPIPGEEKPV
LKEREKRDGETLRPLHRERVKPVPRERQVSRMKEESGEGEEKKPVPGQRQTASREGKEEE
RDGGIDGEREKPVPKERTRFTSSAPMDCDSGPVVSQTSDDSLPPVPPRSILNCPPQRFTS
PLSSSPPARTPASPKLDRHAVKAPAVRSRSQTSTPTSTPTHTPTHAPLHPPNFPSPQTRS
QTLAIQPPANPLGSDGGRITSSVSPTASHTNDINAPPLPPKVGAVPKGPPPIPHRSSPTK
TITDEIQKDQTPQVPPRIRTPQTLEDAHQGLSNQPDTQPALPARRVTQPFRESRLDSLND
CSDDYEEPDLFYPGAHQINASDRDMSLQVPFQAKGRXSSLYSDDEQLDDDDPTLWNDGGM
DSLQGSVYLPISGRLTSTTKVDSSQLAAVIKMGWLDKNPPQGALYYQRRWVKLDVDYLRY
FDNDKEVYSKGIISTAFVTNVSSVGELKFEVVTNNRTFIFRAESEVERNDWVTVLQDCTR
GRHLRSTMNPSSPLSPDYQGYLELRGLRSKLYTIVASDKVFLYKNIEDYRIGLGITSIEM
NVGNVKDTDRRGFDLTTPYRIFSFIAESEQLREQWVEAMQVAIGEALSNSEVAERIWAEP
SNSLCADCEAPQPEWAAINLCVVVCKRCAGEHRGLGPSISKVRSLKMDRKVWTEELIQVF
LLLGNERVNSFWAANVPPSEALTTLSCSDERRRFITNKYRQGKYRKYHPLYGNQKELNNA
LCINVQCSDVLETLRLIFCGADVNCSTGMASWPTVLSLANAHSQPLQVELISHNLNTELP
RSEVAEGMEAIHYSAPPCVSHNGFLFKTASMARAITDSKAREEFSRRWCTVNDGTFSYYE
SDKNSNPNGSLKASEIVCLAVDAPERHGYDHTFELYSESERLYLFGTDDPDGHKEWVKSI
AKSFIPATAEPLLKFAFERIGRLKCKDGLNLNTSKVGWFALVGSTLHTYLDGSKGEEIHL
RKLNELSIQQDNEVLVLVERGRTLYIEGERKLDFSGWCAAIQAAAGSGGDTLSQQQLTET
DIPVIVHSCIGYITQCGLTSEGIYRKSGVNSRVAALCEKFNRDARSVRLREGEHQVDDVS
NTLKRFFRELGEGLFTSEDGSTWLSAAAIQDEGKKIAQYQLLLKRLPCVNKATLQALINH
LYCVQRFSELNQMNLHNLAIVFGPTLFQSDGKDFTAGRAVEDLIQHYTVIFEVDEQQLKK
QLEEITVIIQVREKLNTKFPSTEPGGHFICTVYLEEKKDTAEQHVKIPGSMTAAELTCEV
LDRRNIRVKDKDYWNCWEVSDKEEMERPLHYQERVLPILHSFGTDSHLLIKKHIAMEAMM
VYLASKVDASKHGMMKYREERSILGRSAGSFHDRYFILNSNSLRMYKEVRSNRTERDWPV
KNLKVYMGIKKKVRPPTCWGLTVVYESKKQEKQERQQWYLCCDAQSEMREWYATFLSIQY
DGNVWPQDGLKQTRVSRVLPDARHGNVSLIPLRGSENEMRNSVAAFSQDPLALFRDVR
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacttacaaacagtcatgtctcagtctgaatcctgttcgactgtgtgggactgg
ttatgtgttcttcgtcttgagcagtattctgaggcatttcggagcgccgggctggcaacg
ctaccacaatgttgcaacctcacaccagatcagttggagcggatgggcatcacactgccg
ggtcaccagagacgcatcctggctagcctgaacaaaacgcatggtaacaatgagacacaa
tctgacacgcactctcaccatttacagtccgagagagatcagaggttggaggaaacggga
catcccaaagtgttgccgagagggagacctgttcctatcccaggggaagaaaaacctgtc
cttaaggaaagggagaaaagagatggagagacattgagacctttgcacagggagagagtg
aaaccagtccccagggagagacaagtgtccaggatgaaagaggaaagtggtgaaggagag
gagaagaagccagttcctggacaaagacaaacagcatctagagaaggaaaagaggaggag
agggatgggggaatagatggagagagggagaagcctgtgcctaaagaaaggactaggttt
acctccagtgctccaatggactgtgactccggcccagttgtctcccaaacttctgacgac
tctttaccccctgtccctccacgaagcatccttaactgtcctccgcagcgcttcacctct
cccctcagctcctcacctcctgctcgaacccctgcctcccccaaactggacaggcatgcg
gttaaagccccagctgtacggagcagatcccagacttccacccccacgagcacccctacc
cacaccccgacacatgcacctctccaccctcccaacttcccctctcctcaaactcgttct
cagacattagctattcagccccctgccaatcctttgggtagtgatggaggaagaataact
tcatctgtctcccccactgcttcccataccaatgacataaatgctccacctctcccacca
aaagtaggggcggtacctaaaggccctccaccaatcccacaccgctcctctcccaccaag
acgatcactgatgagatccagaaagaccaaactccacaggtcccacctcgcatcaggaca
ccccaaactctagaagacgcacatcaaggtctgtcaaatcaaccggacactcagccggcc
ctgcctgctaggagagtcacgcaacctttccgtgaatccaggttggattcacttaatgat
tgttctgatgactatgaagaaccagacttgttttaccccggtgctcatcaaataaacgca
tcagacagggatatgtcccttcaagtgcctttccaggcaaaaggacgcngtagttctttg
tacagtgatgatgagcagttggatgatgatgatcccactctctggaatgacgggggtatg
gacagtctgcaaggaagtgtctacctgccaatcagtggcagactgacctcgaccactaaa
gtcgacagctctcagcttgctgctgtcatcaagatgggctggctggacaagaatccacct
cagggagccctctattatcagcgacgatgggtgaagctggatgttgactacctgagatac
tttgacaatgacaaggaggtgtattctaaggggatcatctctactgccttcgtcactaat
gtgagcagtgtgggtgagctgaagtttgaggtcgtcacaaacaaccgaaccttcatcttc
agggctgaaagtgaagtcgagagaaacgactgggtgactgtgctgcaggactgcaccagg
gggcgccatctgcgcagcaccatgaaccctagctcacctttgtccccggactatcaggga
tacctggagctcagagggttacgctccaaactttataccattgttgcctcagataaagtc
ttcctctacaaaaacattgaggactatcggataggattgggaatcacatccattgagatg
aatgtaggaaatgttaaggacacagatcgtcgtggctttgatctcaccacgccttatcgc
atcttcagtttcatcgcagaatcagagcagctacgagagcagtgggtggaagccatgcag
gttgcaataggtgaggcgctgtcgaatagcgaggtggcagagcggatctgggcggagcct
agcaacagcctttgtgccgactgtgaggctccccagccggagtgggctgccatcaacttg
tgtgtggtggtctgcaagcgatgtgcaggagagcacagaggactgggtcctagcatttca
aaggttcgtagtctgaagatggacaggaaagtctggacagaggagcttatacaggttttt
ctgttgctgggcaacgagcgggtaaacagcttttgggcagctaacgtcccgccaagtgaa
gctttgacaaccttgagctgcagcgacgagagacgacgcttcatcaccaacaaatatcgc
cagggcaaatacaggaagtaccaccctctgtacggaaaccagaaagagctcaacaatgct
ctttgtataaatgtgcagtgcagcgatgtgctggaaacgttgagactgattttctgtggt
gccgatgtgaattgttcaactggtatggcaagttggcccacggttctctccctggccaac
gcacactcgcaacccttacaggttgagttaattagccacaatctcaacacagagctacca
cggtcagaggtggctgaaggcatggaggcgatacattactcagcaccaccttgtgtgtct
cacaatggcttcctgttcaagactgcatccatggctcgggctatcacagacagcaaggct
agagaagagttcagtcgtcgctggtgcactgtgaatgatggcaccttcagctactatgag
agtgacaagaactcaaaccctaacggttctttgaaggcttcagagatagtctgcttggct
gtcgacgcgcctgagagacacgggtatgaccacaccttcgaactctactcagagtcggag
cgtctctatctgtttggcactgatgacccagacggccacaaggaatgggtcaagtctatt
gccaagagctttatcccggccactgcagagccgctactgaagttcgctttcgagcggatt
gggcggctgaaatgtaaagacggcctgaaccttaatacatctaaggttggctggtttgct
ctggtgggctccacacttcacacctacctggatggaagcaagggagaggagatccacctc
cgcaaactgaatgaactctcgattcaacaagacaatgaggtgctggttctggtggagaga
ggcagaactctgtacatagagggagagaggaagttggatttttccggctggtgtgctgcc
atccaggcggcagcgggcagtggaggagacactctgagccagcagcagctgacagagaca
gacatacctgtcatagtacacagctgcatcggctacatcacgcagtgcggcttgacctct
gaggggatatatcgtaagagtggggtgaactcccgtgtggcagcactgtgcgagaaattt
aatcgtgatgctcgcagtgtccgtctgagagaaggagagcaccaagtggacgacgtctcc
aacacgctcaaacgcttcttcagggagttgggggagggactgttcacatcagaggatggc
agcacctggctcagtgctgctgctattcaggatgaaggcaagaaaatcgcccagtaccag
ctgctgttgaagagactgccttgtgtcaacaaggctacactacaagcccttatcaaccac
ctctattgcgtgcagcgtttttctgagctgaaccagatgaacctccataatctggccata
gtattcggtcccacactgttccagagcgatgggaaggacttcactgcaggccgtgccgta
gaggacctcatacagcactacacagtcatctttgaggtggatgaacagcagcttaagaag
cagctggaagagatcactgttatcatccaagtgcgagagaaactcaatacaaagtttcct
agtactgaacctggagggcacttcatctgcacagtgtacctggaggaaaagaaggacaca
gcagagcaacatgtcaagatccctggttctatgacggcagcagagctgacctgtgaggtc
ctggaccggcgtaacatcagggttaaagacaaagactactggaactgctgggaggtcagc
gacaaggaggaaatggaacgtccactgcactatcaggagcgagtcttacccatccttcac
tcctttggcaccgactcccatctgctcatcaagaaacacatcgctatggaggcgatgatg
gtctacctggccagtaaagtggatgcatccaaacacgggatgatgaaatacagagaggag
agaagcatcttgggacgctccgctggaagtttccacgaccgatatttcatcctcaattcc
aactctctcagaatgtacaaggaagtcagaagtaaccgtacagaacgtgattggccagtg
aaaaacctgaaggtctacatgggtattaaaaagaaagtccgtcctcctacatgttgggga
ctgacagtcgtgtatgagagtaagaaacaagagaagcaagagagacagcagtggtatctc
tgctgtgacgcccagtcagaaatgagggagtggtatgccactttcctaagtattcagtac
gatggcaacgtgtggcctcaggacggactcaagcagacacgagtgagccgtgtgttgccg
gatgcgcgtcatggtaatgtgtcactgataccgctgcgtggcagtgagaatgagatgcgg
aacagcgttgcagctttcagccaagacccgcttgctctctttagggatgttcggtaa
DBGET
integrated database retrieval system
