Anoplopoma fimbria (sablefish): 129105634
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Entry
129105634 CDS
T09102
Symbol
lamb3
Name
(RefSeq) laminin subunit beta-3
KO
K06244
laminin, beta 3
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04382
Cornified envelope formation
afb04510
Focal adhesion
afb04512
ECM-receptor interaction
afb04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129105634 (lamb3)
04518 Integrin signaling
129105634 (lamb3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129105634 (lamb3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
129105634 (lamb3)
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Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
CCDC39
CCDC18_2nd
CCDC171
CCDC18_1st
LEKR1
RhoGAP
EzrA
DUF745
DUF7215
DUF4407
F5_F8_type_C
CLIP1
CRWN_N
DUF3450
DUF5798
ATG17_like
CdvA
CEP135_TSGA10_CC
ISG65-75
HAUS1
Tropomyosin
TACC_C
Motif
Other DBs
NCBI-GeneID:
129105634
NCBI-ProteinID:
XP_054472751
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All DBs
Position
17:complement(11903146..11924153)
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AA seq
1159 aa
AA seq
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MRILLLLAAIAAVSQAQTDCSRGACYPPSNDLLLGRAQQLHASSTCGLFGSEVYCTPYQQ
RRMKCCPCDSSNPNSKLAHTVRDVLSTSGPDRWWQSRKEVNPVTLQLDLNNLYQLDNLVL
SFKGPRPNAFVIEKTQDDGQSWQPALYLAVNCQREFPGIPTTTPLTLDDTYCYTLPPTGA
DPYQDHTIQFSPLHQYAYVPASKTQKIEDVSALTGLRVRFTELGEVPRPPGRALSRFYAL
KEMRVMGSCMCHGHANRCMPNADNSLLPDSIQVHPQCDCQHNTAGVNCERCADLYNDLPW
RPAEEGNTYTCTRCECNNHAQRCRFDQAVYEASGRRSGGLCEGCMHHTTGPKCDQCAPGY
QPNPRSRMDRPDACISCICSAEGTVNGGRCDDRTGSCVCKVNVEGPRCDRCKRGYYDLSP
ANPLGCSKCSCSPDGSLSDVCDPMTGQCPCRPHFHGLTCEICSKGYWKPSVTGRCQPCSC
DPTRSYSDTCDQVTGQCQCRPGFGGLTCTECPEKAYGDPLIGCRLCRCDSTGTLPQVCDK
KTGACLCRPGVTGTRCDSCSRGHCDSFPGCETCPSCFFTLDAQRQTLSFSLERLSLRLPS
RPVGDGDLGNFEPRIRMLEASLTLIQNSISLPPGVAIQIDNALSQLDNLREQVDKVKDDL
SPLKRVPGLDSELDKLQDLLDSLTLNYKAKKDAIDNDGQNNTGSFTAIKNAYNNSTDAAK
KVDASGKPLKESADIRGETMDLQNKIQPGNTRDLDKLNQSMASRPDLTPVAKQVCGSVRS
EPCTPLQCAGGDLCPPDGTPPCEKGGVCVGALPLSKRADADAKDVKDRLDKLTGKLTDAA
EKLQESQETTNQVRKSAEKLSNKMKQARDDLEDDLKETRDVVKALKDFLSDPSSNLTYIQ
EVSDWILKAKLPLREKLNELNNLAASLPDSESVLKEAKPQLDTARKLLQEAQDARDTALG
VKADVDGLLEGFDMVNDSLSDLEDKLQNSEALIDNINNDIVKAKDQLSPAEKALDDVSLL
MKPMKPQLDELKELLQNGGQWAQDAQDNADKAEDEAAAADKDLLSLVKQLDRLKDVAPAS
GSGGEAVGDRLEKLQKDARALGNTTDSMMKALEGKADSLRGLQEEIRQKSTKLEGLDATL
KDLLETLLEEAHRHRTCSF
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgagaatccttttgcttctagctgccatagctgcagtatcccaggcccagactgactgc
tctcggggggcttgttacccgcccagcaatgacctgctgttgggcagggctcagcagctc
catgcctcctcaacctgcggcctcttcggctccgaggtctactgcaccccgtaccaacag
aggaggatgaagtgttgtccatgtgactccagtaacccaaacagtaagctggcccacact
gtccgggacgtcctgtccacctctggaccagatagatggtggcagtccaggaaagaggtg
aatccagtcactctccagttggacctcaacaacctgtaccagcttgacaacttggtgctc
agcttcaagggtcctcgtcccaatgcctttgtcatagagaagacacaggatgacggccag
tcgtggcagcccgctctctacttagctgtcaactgtcaaagagagtttcccggcatcccc
acaactacacctctaaccctggatgacacatactgctacacactgccccctactggagca
gacccataccaagatcacacaatccaattcagtcctctgcatcagtatgcttatgtccca
gcttccaaaacccaaaaaatagaagatgtgtccgcgttaacggggctgagggtgaggttc
acagagctgggagaagtgccacgtcctccaggcagagctctcagtaggttttacgccctg
aaggagatgagggtgatgggcagctgtatgtgccacggacacgccaaccgatgcatgccc
aacgctgacaacagcctgctgccagacagcatacaggttcaccctcagtgtgactgccag
cacaacacagcaggtgtgaactgtgagcgctgtgctgacctctacaatgatctgccctgg
agacctgcggaggagggcaacacctacacctgcacacgctgcgagtgtaacaaccacgcc
cagcgctgccgttttgaccaggcggtgtacgaggccagcgggcggaggagtggaggtttg
tgtgagggctgcatgcaccacaccacagggccaaagtgtgaccagtgtgccccgggctac
cagccaaacccccgcagccgaatggaccgccccgacgcatgcataagctgtatctgcagc
gctgaggggacggtgaatgggggccggtgtgacgacagaacaggctcctgtgtgtgtaaa
gtgaacgttgaaggcccccgctgtgaccgctgtaagaggggctactacgacctgagcccc
gccaaccctctgggctgctccaagtgctcctgttctccagacgggtccctgtcagatgtt
tgtgacccaatgaccggccagtgtccctgtcgcccccacttccacggcctgacctgtgaa
atatgttcaaaaggctactggaaaccgtccgtgacaggccgctgccaaccctgcagctgt
gaccccaccaggtcatacagtgatacctgtgaccaggtgacaggtcagtgtcagtgcaga
ccaggctttggaggcctgacatgtaccgagtgcccagagaaggcatacggagacccgctc
ataggctgccgattgtgccgctgtgactctacaggaacacttccacaagtctgcgacaag
aagacgggagcctgtctgtgtcggcccggggtcaccggaactcgctgtgactcctgcagt
cgaggacattgtgactccttccctggctgcgagacatgtccctcctgcttcttcaccctg
gacgcccagagacagaccctgagcttttctctggagagactctcccttagattaccttct
cgtcctgtgggtgatggtgatcttggaaacttcgaacctcgcatccgcatgctggaggct
agcctgaccctgatccagaactccatctcccttccacccggtgttgccatacagattgac
aatgctctgtcccaactggacaatctcagggaacaggtggacaaggttaaagatgacctt
tcacccctgaagagagttcctggtctagactcagagctggacaaactgcaggatctgctg
gacagcctcactctgaactacaaagccaagaaagatgcaatagataatgacggtcaaaac
aatacaggatcgtttactgccatcaagaacgcctacaataactccacagatgcagctaag
aaagtggatgccagcgggaagccgctgaaggagtcagctgatatcagaggagagactatg
gacctccaaaacaaaatacagccaggcaacaccagagacctggacaaactgaaccagagc
atggcctcccgacccgacctcactcctgttgccaaacaggtctgtggcagtgttcgctca
gagccctgcacccctctgcagtgtgcgggtggagatctctgtccaccagacggaacccca
ccttgtgagaagggtggggtgtgcgtgggcgccctgcctctgagtaagagggctgacgct
gatgctaaggatgtgaaagacagactggacaagctcactgggaagttaacagatgctgcg
gagaagctccaggaatcacaggagacaaccaaccaggtgagaaagtctgcagagaagctg
tccaataagatgaagcaggccagagacgacctagaagacgacttgaaagagacgcgtgac
gttgtgaaggcgctcaaagatttcctgtcagacccgtcttccaacctgacctacatacag
gaggtgagcgactggatcctgaaagccaaactgcctctgagggagaagttgaatgagctg
aacaatctggccgccagtctaccagacagcgagtccgtgttgaaggaggccaagccgcag
ctggacacagccaggaaactgctgcaggaggcccaagatgccagggatacagcactggga
gtgaaggccgacgtggacgggttgctggaaggcttcgacatggtgaatgactccctctct
gacctggaggacaaactgcagaacagcgaggctctcatagacaacattaacaacgacatt
gtcaaggccaaagaccagctgagcccagctgagaaggctctggatgatgtatcactactg
atgaagccaatgaagcctcagctggacgagctcaaagaacttctgcagaatggaggccag
tgggcccaggatgctcaggataatgcagacaaagctgaggatgaagcagctgctgcagac
aaggacctgttgtccctggtgaagcagctggatcgtcttaaagacgtggctccagccagt
gggtcaggtggagaggcggtgggggatcgactggagaagctgcagaaggatgctagagct
ctgggcaacaccactgacagcatgatgaaggctctggaagggaaggcagattccctacgg
gggctgcaggaagagatccgtcagaagtcaacaaagcttgaaggacttgatgctacgctt
aaagaccttttagaaacacttctagaggaagcccatcggcatcgcacctgctcgttttaa
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integrated database retrieval system
