Anoplopoma fimbria (sablefish): 129105638
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Entry
129105638 CDS
T09102
Symbol
si:dkeyp-97e7.9
Name
(RefSeq) DEP domain-containing mTOR-interacting protein
KO
K20402
DEP domain-containing mTOR-interacting protein
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04140
Autophagy - animal
afb04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
129105638 (si:dkeyp-97e7.9)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129105638 (si:dkeyp-97e7.9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129105638 (si:dkeyp-97e7.9)
Membrane trafficking [BR:
afb04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
129105638 (si:dkeyp-97e7.9)
mTORC2 complex
129105638 (si:dkeyp-97e7.9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEP
PDZ_6
PDZ
Motif
Other DBs
NCBI-GeneID:
129105638
NCBI-ProteinID:
XP_054472756
LinkDB
All DBs
Position
17:6681629..6684225
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AA seq
404 aa
AA seq
DB search
MERTSSIRRKATARQHKGEVMIAGEQLRLRLHDGKLIKDRRYHLRTYPNCFVAQELIDWL
VSHKEAPDRATAVCIMQHLMDHDIVHHVCDKRPVLKDAKLLYRFRKDDGTFPFNTEVKIF
MRGQRLYEHLIGDKKSILQLREEHGVAYQRSFPGYQLIDWLLQNGEAESRRRGLELCRAL
QEQGIIQHVAKKHGFFDSGLLYQFCINFRRRRRLSELLNESGQDDNEGVAVSTHEDNHPD
SPFVLHKNTPQDGNSAFHSVRLSKDLKQVTSGRRGSLNSLQLHSSGFPPLVQLSSTSVSC
NPKSVLTRNYTCEELFAPGAPVIKKVLTVIGDALGWGFVVRGIAPCYVQAVDPGSPSAAA
GVKVRQFVCQVNGQCVLYLDYRTVSRLVKTGPRTVVLEVLEPLE
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaacaagtagcattaggagaaaagccacagccagacaacataaaggagaagtc
atgattgctggagaacaactcaggttgagactacacgatggaaaactgatcaaggaccga
cgctaccacctgcgcacgtatcctaactgctttgtggcacaggaacttatagactggcta
gtgagccataaggaggctccagatcgagcaacagccgtctgcatcatgcagcacctcatg
gatcatgacatcgttcaccacgtctgtgataagaggccagtgttgaaggatgccaaactg
ctgtaccgtttccgcaaggatgatggcacatttcccttcaatacagaggtgaaaatcttc
atgcgaggacaacgactctatgaacatctcataggtgacaagaagtctattcttcagcta
agagaggagcatggcgttgcatatcagcgctcctttcctggataccagctgattgactgg
ctccttcagaacggagaggccgagagccggcgccggggactggagctgtgccgcgccttg
caggagcaaggcatcattcagcacgtggcaaagaagcatggtttctttgacagtggactg
ctctatcagttctgcatcaattttcgccgcagacgccgcctatctgaactgctgaatgaa
agtggacaagacgacaacgaaggggtggcagtgtccacacatgaggacaaccatcctgat
agtccgtttgttctgcacaaaaacacgcctcaggacggcaacagtgctttccattctgtg
aggttaagtaaagatctgaaacaggttaccagtgggcgtcgaggcagcttgaattccctt
cagcttcactcttctggatttccacctctggtccagctgtcttcgacttcagtgagttgc
aatcctaaatcagtgctaacaagaaattatacatgtgaagagttattcgcacctggggca
cctgttattaagaaagtgttgacggtgataggagatgccctgggctggggctttgttgtc
agaggcatagctccctgttatgtgcaggccgttgaccctggaagcccatcagcagctgca
ggagttaaggtgcggcagtttgtgtgccaggtgaatggacagtgtgttctctatctggac
tacaggacagtatccaggctggtgaagaccgggcctcgcactgttgttctggaagttctg
gaaccgttggaatga
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