Anoplopoma fimbria (sablefish): 129105661
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Entry
129105661 CDS
T09102
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129105661 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afb03021
]
129105661 (smarcd1)
03036 Chromosome and associated proteins [BR:
afb03036
]
129105661 (smarcd1)
Transcription machinery [BR:
afb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129105661 (smarcd1)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129105661 (smarcd1)
PBAF complex
129105661 (smarcd1)
GBAF(ncBAF) complex
129105661 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
129105661
NCBI-ProteinID:
XP_054472787
LinkDB
All DBs
Position
17:21711955..21727471
Genome browser
AA seq
516 aa
AA seq
DB search
MAARGGFQTAPTGGGGGGGAMGPGPPVPIAGPGMGPGTPTGRMVPSSAAQNHMYRSPMPG
PGYPRPGMPPSNRMTPQGPAMGPPGYGNSPVSRPVMPGVMDPSRKRPAPNQIQQVQQQNR
NQHTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQK
RKLRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKS
LVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDP
RLARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQ
RLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAG
LDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVANPEEERRA
EFYYQPWAQEAVCRYFYSKVQQRRQELETALGIRNT
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagaggggggtttcagacagcaccgactggtggaggcggcggcggtggagca
atgggacccggaccaccggtaccgatcgcaggaccaggcatgggacccgggacgcccacc
ggacggatggtaccgtcgtcggcggcgcagaaccacatgtaccgctccccgatgcccggg
cccggatacccgagaccaggcatgcctccatccaaccgtatgaccccacagggaccagcc
atgggccccccaggatacggcaacagcccagtgtctcgccctgtgatgcccggagtgatg
gacccgtctcgcaagaggcccgccccaaaccagatccagcaggttcagcagcagaaccgc
aaccagcacacaaagaagaagaagatggctgataaaattctacctcagaggatcagggaa
ctggtcccggagtctcaggcttacatggatctgctggcttttgagaggaagctggaccag
accatcatgcgcaagaggctggacattcaggaggccctcaagaggcccattaagcaaaag
agaaagcttcggatcttcatatcaaacacctttaaccccgcaaagcccgacgctgaggat
ggagaaggcacagttgcatcatgggagctacgtgttgaggggcgtctgctggaagatacg
gctgtgtccaagtatgaagccaccaaacagaagcggaagttctcctctttcttcaagtcc
ctggtgatcgagttggacaaagacctgtatggtccagataatcaccttgtggagtggcac
aggactgccaccacccaggagactgatggtttccaggtgaagaggcccggtgatgtgggg
gttcgctgcaccgtcctgctcatgctcgactaccagccccctcagttcaagctggacccc
cggctggcccgtatgctgggcatccacacccagaccagacccgtcatcattcaggctctg
tggcagtacgtcaagacccacaaactccaggaccctcatgagcgcgagttcatcaactgt
gacaaatacctgcagcagatctttgagactcagcgaatgaagttctccgagatcccgcag
cgcttgcatgccctcctgatgcccccagagccaatcatcatcaaccatgtgatcagtgtt
gaccctaatgaccaaaagaagactgcgtgctacgacattgacgtggaggtcgacgacacg
ctgaagacccagatgaactccttcctgctctccacagccagtcagcaggaaatagccgga
ctggataacaagatccatgaaaccattgagaccattaaccagctgaagacccagagagag
ttcatgttgagttttgccagagatcctcagggctttatcaacgactggctgcagtcgcag
tgcagagacctcaagaccatgacagatgtggtagcaaacccagaagaagagcggagagca
gagttttactaccagccgtgggctcaggaggccgtctgtcgctacttctactccaaggtc
cagcagaggagacaggagctggagacggcgctcggcatcaggaacacctaa
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