Anoplopoma fimbria (sablefish): 129105729
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Entry
129105729 CDS
T09102
Symbol
cntn3b
Name
(RefSeq) contactin-3
KO
K06761
contactin 3/4/5/6
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
afb04515
]
129105729 (cntn3b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
afb00537
]
129105729 (cntn3b)
Cell adhesion molecules [BR:
afb04515
]
Immunoglobulin superfamily
Contactins
129105729 (cntn3b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
afb00537
]
Others
129105729 (cntn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_5
Sp38
Ig_C17orf99
C2-set_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
C2-set_3
Pox_C7_F8A
Motif
Other DBs
NCBI-GeneID:
129105729
NCBI-ProteinID:
XP_054472877
LinkDB
All DBs
Position
17:complement(8027176..8067493)
Genome browser
AA seq
1026 aa
AA seq
DB search
MMLPWKQIVLLSITGCLAACTEDVIFQGPRWRTEPSDLNLPINSPDQQATVTCEAEGSPP
PQYRWSLNGTLIDLGNDYRRHMSGGSLIISNLDKDQDSGVYQCTAFNTWGSILGRRASLQ
FAYLDNFKSQTVRNAVNVREGQGVVLLCGPPAHSGELTFAWIFNEYPYFVQQDSRRFISQ
ETGSLYIAKVEPSDVGNYTCVVNNSVTREKVLSSPTPLVLRSDGVMGEYEPKIEVNFPDS
VPAAKESVVKLECFALGNPVPEISWRRTSGIPFPSKVKMKNSNAVLEIPNFQQEDAGTYE
CMAENRRGKNAARGRISFHAKPHWLQTMTDTALSIEENLFWECKANGKPKPSYSWLKNGE
QLTSEGRVQIENGALSITSVNLSDSGVYQCVAENKHGIIYSGAQLMVLASPPSFSKSPLR
ALLKARSGSEVTLECKPQASPPAISLWKKGNEILQRNERITLLPNGTLKIANVTRRDAAS
YTCVAKNQFGTASTTGRLLITEPTRITMRATNMEIIVGESIVLPCQIACDPALDVSFSWA
FNGQLIDFQRDSDHFERVGGTISGDLMVRNIQLNHGGKYVCVIDTDVESLSTSAILVVKG
PPGPPDKVAVEEITDSTAQLSWTPGRDNGSPITGYIIQARTPFTVGWQAVDTVPEVVNGN
TLTATVVGLNAWVEYEFRVVVRNIVGLGEPSPASAKTRTEDAIPDTAPTDVGGGGGTKSE
LVITWEPVPEELQNGEGFGYIIAFRPFGTVMWTRAVISTPGVSRYVFRNDTIPPFSPFDV
KVGAYNNRGEGPFSSIATVYSAEEVPSVAPKRVWTRSVSAVQIEVIWEALPAISERVLGY
EVVYWEDDTKPDTVGKVRISGNYTLVNITGLRANTVYYLCVAAFNTAGPGPQLAPINATT
KKPPPDRAPLNIQWTMVGSTLTMHWDVVVATEAESKVTGYLVLLKRQRYNDINTIQTDKT
TVELSLSANDNYLIQIKAMSEGGEGVGSEPIHIHKLSMGARGSGAIRISPLCLSAVLIGA
LLCSAW
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgatgttaccatggaaacaaattgttctgctatcaatcactggatgccttgcagcctgt
acagaggatgtcatatttcaagggccaagatggaggacggagccgagtgacctcaattta
ccgatcaactccccggaccagcaggccaccgtcacgtgcgaggcggaagggagccctccc
ccgcagtacagatggtcactaaacggaacactcattgatctggggaatgactaccggcgt
cacatgtctgggggcagcctgatcattagcaacctggacaaggaccaagactccggggta
taccagtgcacggccttcaacacgtgggggtccatcctcggccgcagagccagcctgcaa
tttgcatatcttgataacttcaaatctcaaacggtgaggaacgctgtcaacgtccgtgag
ggccagggagtggttctgttatgtggaccacctgcacactctggagagctgacatttgca
tggatcttcaatgagtacccgtactttgtccaacaagacagtcgtcgattcatctctcag
gagaccgggagtctgtacattgcaaaagtggagccctcagatgttggaaactacacctgt
gtggttaacaactctgtgacgagggagaaggtgctcagctctcccacaccgctggtcctc
agaagtgacggagtaatgggcgaatatgaacccaaaatagaagttaatttccctgattca
gttccagctgcgaaggaatcggtggtgaaactggaatgcttcgctctgggaaaccccgtc
ccagaaataagctggaggagaaccagcggcatccctttccccagcaaagtgaaaatgaag
aattcaaacgccgtccttgaaatacccaatttccagcaggaagacgcagggacgtacgaa
tgtatggcggagaatcggcgaggcaaaaatgccgcacggggtcgtatttcattccatgct
aaaccccactggctccagactatgacggacacagcgctgtccatcgaggagaacctcttc
tgggagtgtaaggccaacgggaagcccaaaccgtcctacagctggctgaagaatggggag
caattgacgtctgagggccgggtacaaatcgaaaacggggctctctccataacgtcagta
aacctgtcggattccggggtgtatcagtgtgtggccgaaaacaaacatggcattatttat
tccggggcccaactaatggtgttagcttcacctcccagtttctccaaaagtccattaagg
gccttgctaaaagctcgctcaggcagcgaagtcactcttgaatgcaagccccaggcctcg
cccccagcaattagcctgtggaagaaagggaatgagatcctgcagagaaacgaaaggatt
actttgcttcccaatgggacattaaagatcgccaatgtaaccagacgggatgcggcgagc
tacacgtgtgtcgctaagaatcagtttgggacagcgagcacaactgggaggctgctcatc
accgagcccaccaggatcaccatgagggccactaacatggagattattgttggcgagagc
atcgtgttaccctgccagattgcctgcgatccagctctggatgtttctttctcgtgggca
ttcaacggccagctcatcgacttccagcgagacagcgatcacttcgaaagagtgggcggg
actatatcaggggatctgatggttcgtaacatccagctgaaccacggggggaaatatgtc
tgcgttattgacactgatgtggagagcctgtccacctctgccatcttggttgtcaaaggt
ccgccaggtcctccggacaaagtggcagtggaagagatcacggacagtaccgcccagctt
tcgtggactcccggaagggacaacggcagccccatcaccggctacatcatccaggcccga
actccctttactgtgggctggcaggctgttgacacagtgccggaggtggtcaacggtaac
acgctgacagcgacagtggtgggtctgaacgcctgggtggagtacgagttcagggtggtg
gtccgcaacatcgtaggcctgggagagcccagtccggcctcagctaagaccaggacagag
gatgccattcctgatacagctcccactgatgtcggaggtggaggcggtacaaagtctgaa
ttagtgataacatgggagcctgttcccgaggaactgcagaacggagagggcttcgggtac
atcattgccttccggccttttggcacggtcatgtggacgcgggcggtcatctccacgccc
ggcgtgtcgcgctacgtcttccgcaatgacaccatcccgcccttctcgccctttgacgtg
aaagtgggggcgtacaacaaccgaggggaggggcccttcagctccattgccaccgtgtac
tcggcggaggaggtccccagcgtggctcctaagagggtttggactagaagtgtgtctgca
gtgcagattgaagtgatctgggaagctctccctgccatctcagaaagagtgcttggatat
gaggttgtgtactgggaagacgacaccaagcctgacactgtcggcaaagtgcgcatatct
ggcaactacacgctggtgaacatcacagggctgagagccaacacagtgtactacctctgt
gtggccgcattcaatacggctggccccgggccacagttggcgcctatcaacgccaccaca
aagaaaccacctccagatcgggctccgctcaacatacaatggaccatggttggctccaca
ctcacgatgcactgggatgtggtagtagctacggaagcagagtcaaaggtcactggatat
ttggtgctgctgaagagacaacgctacaacgacatcaacaccatccagaccgacaaaacc
accgtggagctcagcctctcggccaacgacaactatctcattcagatcaaggccatgagt
gagggcggcgaaggtgtgggcagcgaacccatccacatccataaattaagcatgggagcg
cggggctcgggagcaatccgcatcagcccattgtgcctctctgcggtcctcatcggcgcc
ctgctctgctccgcctggtga
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