Anoplopoma fimbria (sablefish): 129105767
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Entry
129105767 CDS
T09102
Symbol
usp48
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48 isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
afb01002
]
129105767 (usp48)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129105767 (usp48)
Enzymes [BR:
afb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129105767 (usp48)
Peptidases and inhibitors [BR:
afb01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
129105767 (usp48)
Ubiquitin system [BR:
afb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129105767 (usp48)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
DUF6276
Spore_YhaL
Motif
Other DBs
NCBI-GeneID:
129105767
NCBI-ProteinID:
XP_054472926
LinkDB
All DBs
Position
17:complement(11871953..11888760)
Genome browser
AA seq
1049 aa
AA seq
DB search
MAPRLQLEKAAWRWVETVKPEEIKQEHIELAYRVNLPACNRGTCRRNCKGNPNCLVGIGE
QAWLGDIDENAFHNIDDPNSERRDKNTFVGLTNLGATCYVNTFLQVWFHNLELRRSLYQC
HNSRAEEHNTDSEYEPQSICEHLQYLFALLQNSNRKYIDPSGLVKALGLDTGQQQDAQEF
SKLFLSLLEDTLSKQKNPNLQNVIQLQFCGQFSYVTVCNECGRSSALPSRFYELELNIQG
HKNLTECVTEFLKEEKLDGDNRYFCESCQTKQSATRRIRLHSIPPTLNLQLMRFVFDRQT
GHKKKLNTFISFPEQLDMAPFLEGKPDQKCVYELSAVLIHRGISAYSGHYIAHVKDARTG
DWYKFNDEEIEKMEGKKLQLGIEEDIAETVKSQARKPKCSKGYHCSRNAYMLVYKVQEEE
NTDHSWTNVEVPAFLQRLVDQDNHKFEEWCNEMADMRKQSVDKGKAKHEEVKELYELLPA
RDGEPYEFIPLDWLKKWLEDSTATKEIDNSLFLCSHGKLHPDKVADSKRVSLQAAQVLYE
RYSGGPRMDGSSLCRECVGQRCRVLRLKNQLNEDYKEVTNLVKRTLSGEGYWVGKASLRS
WRQLALEQLEEDEHETKHSNGQTNGQGPHNNSKDFGSELSEGNGDEMKTFNEDIVCVHGA
LSILETERKLVSSEVWTKLREYFPKAPEFTQIQESCQQCLTLEQEEKDNEAVSKMMALDQ
KNQLLNLFHEKNRPTLNKWPQGTDVLYIVPLFFVDEWKKFIRRPTKSSPVSNVGNTLLLC
PHGGFMFTYDSLINGDAQHVALLWPSEWEVISRLFIVDQPISIHCFKETTLNGPTTQYTT
QPDICWECRESFLFQQQRDLREYTQATIYIRKVIEDQMMIKDAAPEMNASSSEAEEEKEE
IPKMDEEKDRDFSQSQDGAKRLKLSDDGTASAAAAPVTNVTKLGGIRRSTRHRKLRGEKA
LIVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKSLTDDLATLGSLGVIPESIICLKADE
PIADYAAMDDVYQVRMPEEGFKGTGLLGH
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggcgccccgcttacagctggagaaagcggcctggcgttgggtggaaacggtgaaacca
gaagaaataaagcaggagcatatcgagctagcatatcgcgtcaatcttccggcctgcaac
agaggaacctgcaggaggaactgcaaagggaatcccaactgtcttgtgggtattggtgaa
caggcttggcttggggacattgatgaaaatgctttccacaatattgatgacccaaattca
gagcgtcgagacaagaacacatttgttggcctgaccaacctcggtgcaacatgttacgtc
aacacattcctgcaagtgtggttccacaacctggagctgcgtaggagcctctatcagtgc
cacaattcccgagcagaggaacacaatactgactctgagtacgagcctcagtccatctgt
gagcacctgcagtatctgttcgcactcctgcagaacagcaacagaaaatacatcgaccct
tcagggctggtcaaagcactgggcctcgacacaggacagcagcaggatgcccaggagttt
tcaaagctctttttgtctctattggaggacacgctgtccaagcagaagaaccccaacctg
cagaatgtcatccagctgcagttctgtggacagttctcctacgtcactgtctgtaacgag
tgtggacgatcatctgcacttccgtctcgattctacgagctggagctgaacatccagggc
cacaagaacctcaccgagtgtgtcacagagttcctgaaggaggagaagttggatggggat
aaccgctacttctgtgagagctgtcagactaaacagagcgccacccgcaggatcagattg
cacagcattcctccaaccctaaacctgcagctcatgcgcttcgtctttgatagacaaaca
ggtcacaagaagaagctcaacacctttatcagttttccagagcagctggacatggcgcct
ttcttggaaggaaaaccagaccagaagtgtgtttatgaactgagtgcggtgctgatccat
cggggcatcagtgcctactcaggccactacatcgcccatgtgaaggacgctcgtaccggc
gactggtacaaattcaatgatgaagagattgagaagatggaaggcaagaagctgcagctt
ggcattgaggaggacattgctgagacagtgaagtcccaggcacgaaagccaaagtgcagt
aaaggctaccactgctcccgaaatgcctacatgctggtgtataaggtccaggaagaggag
aatacagatcactcctggaccaacgtcgaggtgccagccttccttcagaggctggtggac
caagacaaccacaaatttgaggagtggtgcaatgaaatggctgacatgagaaaacagagc
gtggacaagggcaaagccaagcatgaggaggtgaaggagctctacgagcttttacccgca
agagacggcgagccgtatgagtttatccccctggactggttgaagaagtggctagaggac
tccactgccacaaaagagatcgacaactccctctttctttgttctcacggcaaactgcac
ccagacaaggtggcagattccaagagggtttcccttcaagctgctcaggtcctctatgag
cgctacagtggagggccgaggatggacggctcctctctgtgtagagagtgtgttggccag
cgctgcagagtgctgcggctgaagaaccagctcaatgaagactacaaggaagtgaccaac
ctggtaaaacgcaccctcagcggtgagggttactgggtgggcaaagcatctctgcgtagc
tggaggcagttggctttagaacagctggaggaggatgaacacgaaaccaaacacagcaat
ggccagaccaatggacagggaccacacaacaacagcaaagatttcggctcagagctctca
gagggcaatggggacgagatgaagaccttcaatgaagacattgtctgcgttcacggggct
ctgagtattttggagaccgaacgaaagctggtatcatctgaagtttggaccaagctgagg
gaatatttccccaaagctccagaattcacccaaatccaagagtcctgtcagcagtgcctg
accttagagcaggaagaaaaggacaatgaggcggtgagtaagatgatggccctggaccag
aagaaccaactgctcaacctcttccatgagaagaaccggccaacactcaacaagtggcct
cagggcacagatgtactctacatagtccctctgttttttgtggatgagtggaaaaaattc
atcaggaggcccactaaatcttcgccagtgtctaatgtgggcaacactctgctgctgtgt
ccccacggaggcttcatgttcacctacgactcgctcatcaatggagatgcacaacatgta
gctctgctctggcccagcgaatgggaagtgatcagcaggctcttcattgtagaccagcca
atctccatccactgcttcaaggagacaacattgaatggtcccaccacacagtacactact
cagcctgatatatgttgggagtgcagagagagcttcctcttccagcagcagagggacctc
agagagtacacccaagccaccatctacatccgcaaagtcatcgaagaccaaatgatgatc
aaagacgcagctccggagatgaacgccagcagctctgaggctgaggaggagaaggaagaa
attccaaagatggacgaagaaaaggaccgagatttcagccagtcacaagatggtgctaag
cggctaaagttgagcgacgacggcacagcatcagcagccgcagctccagtgaccaacgtg
accaaactaggcggaatccggagaagcacacggcacaggaaactcagaggggagaaagcc
ctcatcgtttcagctaaccagacacttaaagagctgaagatacagattatgcacgccttc
tccgtggctccgtttgaccagaacctctccattgatggaaagagtctgacagacgacttg
gccacactgggaagtctgggcgtcatccctgaaagcatcatctgtctaaaggccgatgag
ccaatagcagactacgctgcaatggatgatgtctatcaagtgagaatgcctgaagaggga
tttaaaggcactgggcttctggggcactga
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