Anoplopoma fimbria (sablefish): 129105803
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Entry
129105803 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: class E basic helix-loop-helix protein 40-like
KO
K03729
class B basic helix-loop-helix protein 2
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129105803
Transcription factors [BR:
afb03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
129105803
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GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
Oscp1
Motif
Other DBs
NCBI-GeneID:
129105803
NCBI-ProteinID:
XP_054472980
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Position
17:complement(27354..31110)
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AA seq
428 aa
AA seq
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MERIPSAQPPPLSKHQADLSDVQGMDFPMYVYKPRRGMKRGEESKETYKLPHRLIEKKRR
DRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTSLLEQQQQKILALQNGM
QIDQPAVNQEKSEEMFRSGFHICAKEMLQYLGNHETNGDFTPSHMINHLHKLAAEVLQSP
VRPRTPLSPQAEEIPAYHQHQPHKEKPTSLPPKPSEGYGRNCVPVIQRAHAPTSSEQSGS
DTDTDSGYGGELEKTESGAQQGRPDYYSQESHLKRALAERQSSGIKQEEDEPRHKRXRVE
SSEDELLSGGESSTSSSSCGYASYMSVSPNHPTPPHPLCMPFYLIPPSAAAYLPMLEKCW
YPGAVPMLYPGMGGSAPTMSSERLPAPQLVLSPRGGSPAPVISQTPMDSPALLQALKQVP
PLNQETKD
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaatcccaagcgcgcaaccacctcccctgtccaaacaccaggctgatctgtcg
gacgtgcaggggatggatttcccgatgtatgtttataaacccagacgaggaatgaagaga
ggagaggagagcaaggaaacctacaagctgcctcacagacttattgagaagaaaaggcgt
gaccggataaacgagtgtatcgctcagttgaaagatttattaccagagcacctgaaactc
acgactctgggccatctggagaaggctgtggttttagagcttacactcaagcacgtgaaa
gccctcacctctcttctggagcagcagcagcagaagatcctcgctctgcagaacggcatg
caaattgatcagcctgctgtcaaccaggagaagtcagaggagatgtttcgctctggcttc
cacatttgtgccaaggagatgcttcagtatcttggcaatcatgaaactaatggagatttc
acaccatcccatatgatcaatcaccttcacaagttagccgcagaggtgctgcaaagtccg
gtccgaccccgcactcctcttagccctcaagctgaagaaatccctgcctaccaccagcac
caacctcacaaggagaagcccaccagcttaccccctaaacccagcgagggctacgggagg
aactgtgtacccgtcatccagcgtgcgcacgctccgacgagcagtgagcagagtggcagt
gatacggatacagacagcggctatgggggagagctggagaagactgaatctggggcgcaa
cagggacgtccagattactacagtcaggagagccatctgaagcgagcgctcgccgaaaga
cagagctccggcatcaaacaggaggaagacgagccgcgccacaaacgcncccgggtggag
tcgtcagaggacgagctgctctcaggtggagaatcatcaacatcgtcgtcctcatgcggt
tacgccagttacatgagcgtgtcccccaaccatccaactcctccacaccccctctgcatg
cctttctacctcattccaccctctgctgcggcctacctgccgatgctggagaaatgctgg
taccccggggctgtgcccatgctctatcctggcatgggaggctctgcacccaccatgtcc
agcgaaagactgcctgcacctcagctggtgttgtctcccaggggaggctctccggcccca
gtcatatctcagacccccatggactcccctgccctccttcaagcattaaagcaggtacca
cccctcaaccaggaaaccaaagactga
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