KEGG   Anoplopoma fimbria (sablefish): 129105850
Entry
129105850         CDS       T09102                                 
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X1
  KO
K14298  mRNA export factor
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    129105850 (rae1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:afb03019]
    129105850 (rae1)
   03036 Chromosome and associated proteins [BR:afb03036]
    129105850 (rae1)
Messenger RNA biogenesis [BR:afb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     129105850 (rae1)
Chromosome and associated proteins [BR:afb03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    129105850 (rae1)
SSDB
Motif
Pfam: WD40 Beta-prop_EML_2 WDR55 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_EIPR1 NBCH_WD40 Beta-prop_SPT8 Exonuc_X-T_C
Other DBs
NCBI-GeneID: 129105850
NCBI-ProteinID: XP_054473036
LinkDB
Position
17:complement(5939282..5944135)
AA seq 369 aa
MSLFGTTSGFGAAGTGVFGNATTDSHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIGG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
MQIAQHDGPIKAIHWIKAPNYSCIMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTTTPQDIYAVNAISFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNSNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKKW
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgagtttatttggtacaacctccgggtttggggcagcagggacaggtgtctttggaaat
gcaacaacagacagccataatcccatgaaggatgttgaagtgacttcacctccagatgac
agcatcagctgtctggctttcagtccccccaccatgccagggaatttcctcattggaggt
tcctgggccaacgatgtccgatgctgggaggttcaggacaatgggcagactgtccccaaa
gcccaacagatgcacacaggtcccgtgctggatgtatgctggagtgatgatgggagtaaa
gtcttcacagcgtcctgtgacaaaacagccaagatgtgggatcttaacagcaatcaagct
atgcagattgcacagcatgacggtccgatcaaagcaatccactggataaaagccccgaac
tacagctgtatcatgacaggcagttgggacaaaacactgaagttctgggacacccgctct
cccaatcccatgatgtctctgcagatgccagagagatgctactgtgcagatgttgtgtat
cccatggctgtggttgccacagctgagagaggcctcatagtgtaccagctggagaaccag
ccctctgagtttcgcagaatagattctcctctcaaacatcagcaccgctgtgttgccatc
ttcaaggacaagcagaacaaacccactggctttgcactgggaagcattgagggccgagtg
gccatccactatatcaaccctccaaacccagccaaagacaacttcaccttcaagtgtcac
aggtcgaatggaactaacacaaccactccacaggatatctatgctgtgaatgccatctcc
ttccatcctgtccatggcacactggctactgtgggctcagatggtcgcttcagcttttgg
gacaaagacgcccgcaccaagttgaagacctcagagcagctcgaccagcctattacagct
tgctgcttcaacagcaatggcaacatctttgcatatgcctccagttacgactggtcgaag
ggccatgagtactacaacccccagaaaaagaactacatcttcttgaggaacgctgccgag
gagctgaagcctcggaacaagaaatggtga

DBGET integrated database retrieval system