Anoplopoma fimbria (sablefish): 129105876
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Entry
129105876 CDS
T09102
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129105876 (smc4)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
129105876 (smc4)
Condensin II
129105876 (smc4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
THOC7
AAA_29
APG6_N
ERM_helical
NDC80_loop
Laminin_II
TPR_MLP1_2
HIP1_clath_bdg
DsrE
Motif
Other DBs
NCBI-GeneID:
129105876
NCBI-ProteinID:
XP_054473156
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Position
1:complement(20531076..20548303)
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AA seq
1296 aa
AA seq
DB search
MPSKTAKSSTAKTRGKGSQPRDDSEDELDVPPQQTDSNGQEEAPPTTDPFHGEAAEAVDN
RSLEEILGSIPPPPPPAMTNEPGAPRLMITHLVNRNFKSYAGEQILGPFHKRFSCIIGPN
GSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHSSDKHKDVQSCTVEVHFQMIIDKEGDDY
EVIPNSKFYVSRTANKDNSSAYYINGKKATFKEVGALLRSHGIDLDHNRFLILQGEVEQI
AMMKPKGQTEHDEGMLEYLEDIIGSCRLKEPILTLARRMELLNEQRGEKLNRVKLVEKEK
NALEGEKNKAVEFLTLENDIFKHKSRLCQYYVHDLQKRVVDKEEEKQKILEDTKELTEKN
AKISQETEKMNQELKNVEKKQNKLNKYIETQKEKFTQLDLQDVEVREKIKHSKSKNKKLQ
KQLEKDKEKLEEVRGVPASSEKAISEATARKEELEMQKVKEEKKLEEVMESLKEETSGLQ
QDKETKEKELMELSKAVNETRSRMDLAQSELDIYLSRHNTALTQLNTAKQTLQTTSDTLR
ERRAAIKDLEVKIPQKDQELKKDERALEQLMKMDNETREVVREMRQKVDEAKSSLSSNRS
RGRVLDALMQQKRSGRIPGIFGRLGDLGAIEEKYDVAISSSCGALDNIVVDTIDTAQKCV
MFLKEQNIGFATFIGLDKMKVWERNMAPIRTPEDTPRLFDMVRVEDESVRPAFYFALRDT
LVAQDMEQATRMAFQKDKRWRVVTLKGQIIEMAGTMTGGGRALKGRMGSSIGTEVSQVEL
DRMESKLNEKVSKLQDCQEKKLQLEENVQRLRPQLRDMRNTLEKYANSMTSLAEQEAHLK
LQIKELEANVLAAAPDKTKQKQMEKSLDAFKKDYDAASSKAGKVENEVKRLHNLIVDINS
HKLKAVQDKLDKINKELDECSSTITKAQVAIKTADRNLKKCEDGVTRVQGELEENEKSMA
ELTEQLKKLEDEAGEVMKACQEAEAALPEVQEQYQGVLKEIKVLQQQEHAMQEESLSVRL
RIEQIETTMTEHNNKVKHWQKEATKLSLHSIEGKTAEELPVLKSADLEEISNPNIIINKM
ITLETKSAQMKPNLGAIVEYKKKEELYLQRVAQLDEITTERDQFKRGYEDLRKQRLNEFM
TGFNMITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEK
TLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISLRNNMF
EIADRLIGIYKTHNTTKSVGINPKTIVFKEHDAVTA
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgccatctaaaactgcaaagagctcgactgccaagaccagagggaaagggtcgcagccc
cgggatgactccgaggacgagctggatgtcccccctcaacaaaccgactccaatggccaa
gaggaggcaccgccgaccactgatccgtttcacggggaagctgccgaggcggttgataat
cgaagtttggaggagattctcggcagcatccctccacccccgcccccagcaatgaccaat
gaaccgggcgctcctcgcctcatgataacacatttagtcaaccgcaattttaaatcgtat
gcaggcgagcagattctggggccttttcacaagcgcttttcatgcatcattggtccaaat
gggagtgggaaatccaatgtgatagattcaatgctctttgtgtttggatacagagctcaa
aagatcagatcaaaaaagctctcagttttgattcacagctctgataaacataaagatgtg
caaagctgtactgtggaggtgcattttcaaatgattattgataaggaaggagatgactac
gaagtcatcccaaacagcaagttctatgtttccaggactgccaacaaagacaattcctca
gcctactatatcaatggcaaaaaagccacattcaaagaagtgggagctttactccgaagc
catggcattgacctagaccacaacagatttctgatcttacagggcgaggtggagcagatt
gccatgatgaagcctaaaggtcagacagagcatgacgagggcatgctggagtacctggag
gacattatcggctcctgccgcctcaaggagccaatcctaaccctggctcgccgcatggag
ctactcaatgagcagagaggagagaagctaaaccgagtaaagctggtggaaaaggagaag
aatgctttggagggagaaaagaacaaagctgtggagttcctcaccttggagaatgacatc
ttcaaacacaagagtcggctctgccaatattatgttcacgatctgcagaaacgtgtggta
gataaagaggaggagaagcagaagatcttggaggacaccaaggaacttaccgagaaaaat
gcaaagatatcacaagagacagagaaaatgaaccaagagctcaaaaatgtggagaagaaa
caaaataagctcaacaagtacattgagacccagaaggagaagttcacccagctggacctg
caggacgttgaagtgcgtgagaagattaagcactccaagagcaagaacaagaaactgcag
aagcagcttgagaaggacaaagaaaagctggaggaagtgcgcggtgtaccagccagcagt
gaaaaggccatctctgaggcaacagcacgcaaggaagagctggagatgcagaaggtgaaa
gaagagaaaaaacttgaggaggtgatggagagtctcaaggaagagaccagcggtttgcaa
caggacaaagagaccaaagagaaagagctgatggagctcagtaaggctgtaaatgagacc
cggtctcgtatggacctggctcagtcggagcttgacatctaccttagccgccacaacaca
gcgctgacgcagctcaacacggccaagcagacacttcagacgacctctgacacactgcgt
gagcgccgtgcggccatcaaagacttggaagtcaaaataccccagaaagatcaggagctc
aaaaaggatgaaagagcgctggagcagctgatgaagatggataatgagaccagggaagtg
gtgagggaaatgaggcagaaggtggatgaagccaagagctctctgtcctccaaccgcagt
cgaggaagagtcctggatgccctcatgcagcagaagaggagtggcagaatccctggcatc
tttggaagattgggagacctcggagccattgaagagaagtatgacgtggccatttcctct
agttgtggcgccttggacaacatcgtggtggataccattgacacagctcagaagtgtgtc
atgttcctcaaagagcagaacatcggcttcgccacattcattggtcttgacaagatgaag
gtgtgggagaggaacatggctcccattcgcactccagaggacacccctcgtctctttgac
atggtgcgtgtggaggatgaaagtgtgcgaccagctttctactttgccctaagggacacg
ctggtggcccaggacatggagcaggccacaaggatggccttccaaaaagacaagcgctgg
agagtggtcaccctgaagggacagatcattgagatggctggaaccatgactggaggagga
agagcactgaagggcaggatgggctcctccattggtacggaggtctcccaggtggagctt
gaccgtatggagagcaagctgaatgagaaagtgtcaaagctgcaggactgccaagagaaa
aagttgcagctagaagagaatgtccagcgcctgcgtccacagctcagagatatgaggaac
accctggagaaatacgccaacagcatgaccagtctagctgagcaggaggctcacttgaaa
cttcagatcaaggaactggaggccaatgtgctggctgctgccccagacaagaccaaacag
aaacagatggagaagagcctggacgccttcaagaaagactacgacgcggcgtccagtaag
gctggaaaggtggaaaatgaggtgaaaaggctccacaacctgattgtagacatcaacagc
cacaagctgaaggctgtgcaggacaagcttgacaagatcaacaaggagctagacgagtgc
tcgtccaccataaccaaggcccaggtagccataaagacagctgaccgcaacctgaagaag
tgtgaggatggtgtgactcgtgtgcagggtgagctggaggagaatgagaaatcaatggct
gagctcactgaacaactgaagaaactggaagatgaggctggggaggtcatgaaggcctgt
caggaggctgaggctgcacttcctgaggtgcaggagcagtatcagggagtgttgaaggag
ataaaggtcctgcagcagcaggagcacgcaatgcaggaggagtcgctcagcgttcggctg
cgcattgagcagatcgagaccaccatgactgaacacaacaacaaagtcaaacactggcag
aaagaggccaccaagctatcccttcatagcattgagggaaagacagccgaggaacttcct
gtacttaagtctgctgatctcgaagaaatctccaatccaaacatcatcatcaacaagatg
atcactttagagaccaagagtgcccagatgaagccaaacctcggggccattgttgagtac
aagaagaaggaggagctgtacctgcagcgtgtggctcagctggacgagatcaccacagag
agggatcaattcaaacgtggctacgaggacctccgcaaacagcgcctcaacgagtttatg
accggattcaacatgatcacaaacaagctgaaggaaaactaccagatgctcacactgggg
ggcgacgcggagctggagctcgtggacagtttagaccccttctccgagggaatcatgttc
agtgtgcgtcctccaaagaagagctggaagaagatctttaacctgtcaggaggtgagaag
accctcagctccttggccttggtgtttgctctgcaccactacaaacccacaccgctctac
ttcatggacgagatagacgccgctctcgacttcaagaatgtctccatagtggcctgttac
atttatgagcaaacaaagaacgctcagttcatcatcatctccctgagaaacaacatgttt
gagattgccgatcgtctcatcggcatctacaaaactcacaacaccaccaagagcgtggga
atcaaccccaagaccatcgtgtttaaagagcatgatgccgtcactgcttaa
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