Anoplopoma fimbria (sablefish): 129105904
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Entry
129105904 CDS
T09102
Symbol
zgc:113307
Name
(RefSeq) lumican
KO
K08122
lumican
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
afb00535
]
129105904 (zgc:113307)
Proteoglycans [BR:
afb00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
129105904 (zgc:113307)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_9
LRRNT
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
129105904
NCBI-ProteinID:
XP_054473147
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Position
17:1012234..1016484
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AA seq
391 aa
AA seq
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MEEVWGMGCGQRLKKRNVSVGLHISPAVSMAFLCHAVLLLLCVLNSASATVVADMDYGGV
PLWINRLLGEPSVMSLQGRMDAAWLRANNPLACPQQCDCPIQWPTALYCDHRGLADTPDG
LPDRTRYLFLQGNNISSLSSSFLSNITALHWLILDHNQLQDLVPLQNQTQLYYLFANQNH
LKSVPSALPAGLKQLRLANNQISSISPGAFQNLHNLTLLLLQGNRLQTLTEGDLKGLFSL
NLLDLSGNLFSAFPKHLPPSVQQLYISNNTLRGLDEDSFLGLLKLKYLRLSHCGLQSSGV
HQQVFNFSSLVELDLSYNKLKTIPTVPTTLQYLYLEANEIQEFNVSSFCREVGPLSYSRM
KILRLEGNKMSYQQLPSNWVFCLRVLESIYI
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtctggggtatgggatgtgggcagcgtttgaagaagaggaatgtatcagtc
ggattacatatctcaccagctgtctctatggctttcctgtgccatgctgtgctgctgttg
ctgtgtgttctcaactctgcctcagccactgttgtagctgacatggactacggaggtgtt
cctctgtggataaatcgcctgctgggtgaacccagtgtgatgagcctgcaaggacggatg
gatgcagcctggttgcgagctaacaaccccctggcctgccctcagcagtgtgactgcccc
atccagtggcccacggcgctctactgtgaccacagaggcctggcagacacccctgacggc
ctgccggacagaactcggtacctgtttcttcagggcaacaacatctcgtccttgtcctcc
tcttttttgtccaacattactgctctacactggctcatcctggaccacaatcagctgcaa
gacctggtcccgctgcagaaccagacccagctgtactacttatttgccaaccaaaaccac
ctgaaatcagtgccaagcgctctaccagctggactcaagcagctgcgactggcaaacaac
caaatcagcagcatcagtcctggagctttccagaacctgcacaacttgacactgctgctg
ctgcagggaaacagactgcaaaccctcacagagggagacctcaaaggtctgttcagtctg
aacctgctggacctcagtgggaatttgttctcggctttccccaaacatttacccccttct
gtccagcagctctatatttccaataacactctccgtgggctggatgaagacagttttttg
ggattgctcaagctaaagtatcttcgtctaagtcactgtggtctgcagagcagcggcgtc
caccagcaggtcttcaacttctccagtttggtggaactggacctttcttataacaaactt
aaaactattcccacagtcccaaccaccctgcagtacctctacctggaggccaatgaaata
caagagttcaatgtgtccagtttctgcagagaggtgggacctctgtcctactccaggatg
aagatcctacgattagagggaaacaaaatgtcctaccaacagctgccatccaactgggtc
ttttgcctgcgagtgcttgaaagtatttacatctga
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