Anoplopoma fimbria (sablefish): 129105937
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Entry
129105937 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: class E basic helix-loop-helix protein 40-like
KO
K03729
class B basic helix-loop-helix protein 2
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129105937
Transcription factors [BR:
afb03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
129105937
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GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
Oscp1
Motif
Other DBs
NCBI-GeneID:
129105937
NCBI-ProteinID:
XP_054473189
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Position
17:13701651..13705357
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AA seq
437 aa
AA seq
DB search
MERIPSAQPPPLSKHQADLSDVQGMDFPMYVYKPRRGMRRGEQGPLLFCLLPTCFETYKL
PHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTSLLEQQQ
QKMLALQNGMQIDQPAVNQEKSEEMFRSGFHICAKEMLQYLGNHETNGDFTPSHMINHLH
KLAAEVLQSPVRPRTPLSPQAEEIPAYHQHQPHKEKPTSLPPKSSEGYGRNCVPVIQRAH
APTSSEQSGSDTDTDSGYGGELEKTESGAQQGRPDYYSQESHLKRALAERQSSGIKQEED
EPRHKRPRVESSEDELLSGGESSTSSSSCGYASYMSVSPNHPTPPHPLCMPFYLIPPSAA
AYLPMLEKCWYPGAVPMLYPGMGGSAPTMSSETACTSAGVVSQGGSPAPVISQTPMDSPA
LLQALKQVPPLNQETKD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaatcccaagcgcgcaaccacctcccctgtccaaacaccaggctgatctgtcg
gacgtgcaggggatggatttcccaatgtatgtttataaacccagacgaggaatgaggaga
ggagagcaaggtccgttattattttgcttattgccaacttgtttcgaaacctacaagctg
cctcacagacttattgagaagaaaaggcgtgaccggataaacgagtgtatcgctcagttg
aaagatttattaccagagcacctgaaactcacgactctgggccatctggagaaggctgtg
gttttagagcttacactcaagcacgtgaaagccctcacctctcttctggagcagcagcag
cagaagatgctcgctctgcagaacggcatgcaaattgatcagcctgctgtcaaccaggag
aagtcagaggagatgtttcgctctggcttccacatttgtgccaaggagatgcttcagtat
cttggcaatcatgaaactaatggagatttcacaccatcccatatgatcaatcaccttcac
aagttagccgcagaggtgctgcaaagtccggtccgaccccgcactcctcttagccctcaa
gctgaagaaatccctgcctaccaccagcaccaacctcacaaggagaagcccaccagctta
ccccctaaatccagcgagggctacgggaggaactgtgtacccgtcatccagcgtgcgcac
gctccgacgagcagtgagcagagtggcagtgatacggatacagacagcggctatggggga
gagctggagaagactgaatctggggcgcaacagggacgtccagattactacagtcaggag
agccatctgaagcgagcgctcgccgaaagacagagctccggcatcaaacaggaggaagac
gagccgcgccacaaacgcccccgggtggagtcgtcagaggacgagctgctctcaggtgga
gaatcatcaacatcgtcgtcctcatgcggttacgccagttacatgagcgtgtcccccaac
catccaactcctccacaccccctctgcatgcctttctacctcattccaccctctgctgcg
gcctacctgccgatgctggagaaatgctggtaccccggggctgtgcccatgctctatcct
ggcatgggaggctctgcacccaccatgtccagcgaaactgcctgcacctcagctggtgtt
gtctcccagggaggctctccggccccagtcatatctcagacccccatggactcccctgcc
ctccttcaagcattaaagcaggtaccacccctcaaccaggaaaccaaagactga
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