Anoplopoma fimbria (sablefish): 129105988 Help Entry 129105988         CDS       T09102                                  Symbol nisch Name (RefSeq) LOW QUALITY PROTEIN: nischarin   KO K24095   nischarin Organism afb  Anoplopoma fimbria (sablefish) Brite KEGG Orthology (KO) [BR:afb00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04990 Domain-containing proteins not elsewhere classified [BR:afb04990]     129105988 (nisch) Domain-containing proteins not elsewhere classified [BR:afb04990]  Phox homology (PX) domain-containing proteins   Other PX domain-containing proteins    129105988 (nisch) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PH_NISCH_C LRR_4 PX LRR_8 LRR_9 LRR_NXF1-5 PH_PLEKHM2 LRR_6 NACHT DUF5580 PH_S11IP_C Motif Other DBs NCBI-GeneID:  129105988 NCBI-ProteinID:  XP_054473251 LinkDB All DBs Position 17:25540037..25565434 Genome browser AA seq 1524 aa AA seqDB search MEPDTFAEEVSQRKVCVVGSELVENYTVYIIEVSDGEHRWTVKHRYSDFHDLHEKLTAEK KVDRGLLPPKKMLGKNSKSLVERRQKELELYLQTLLQQFPQATPTPLSCFLHFHLYEING ITAALAEDLFNKGEQLLQAGEVFSLRPLQLFSVSQQLRLAKPTCCNGDAKTDLGHILDFT CRLRYLKVSGTSGPVGTSNIQESNLPFDLSVFKSLLQIEISECSSQQIQGLSSLRSSLAT LSIHHSTETMTSILVPEASEFSQWEAEGAESGCPVTAVIPVWRNLTTLDMSHNGIGIIDS SVKLIPKVEFLDLSHNQLSTVENLQHLYNLVHVDLSYNNLLVLEAAHTRLGNIKTLSLAG NQLDQLTGLTKLYSLVNLDLSHNQLAQLEEIRNIGSLPCLEKLNLSSNPMCIIPDYRTKV LTQFGDRAAEVCLDGTVTTEKELDTVEVLKAIQKAKEVKDRMSSGDKKISEETKLSAAAA PPHLSSPPSPSSCCSSAVAPPAVTSSSSSSSSSSSSSTSTSTSSTSTSSCPAQQAACPSQ DMTSREEEAVPPTVLPPVDAAPPPASFNTNTHLLSAEPAQVQQAAVSLSEHKLCGAPPSV TTTTTTNNISCVCCSPSSRPPETSCFSCSASLFPHLPSHLLSLSSSNKDFITQLSQRLGS ILKEQRTETEEEEKEEEEEEKEDETRSESREVQSHVEVTEVGSPSPGSGDGYFEMGLDDS VEESVCSSSSTSLAVPPADELDGHQGELCGEHEEDEVQLRRVLWCYCLQVKEEVEQKEVC LVLMDRQLGLLFLSDDVTGTNQDADPEQSRPVEEVLSSLQVDLLLPYSQLLLSCSADLPD SCLAFGLHNGLTRWYLFSEVEQLRQTRTELTALIQAAKSQTDPDPPITPQLLPRSLINSW ELEESQGAQGGYPAFLLLSSSSSAVDLHPLLSDILSERDDSTLPSILVLTHRHLWVLKMD FRELAERERMRSADLHHSSSSSSSSSSWCRLVRVPLGSVVLHPRERASPVGDRSSSTSCP DPKHRYRRTRTVELLLGGQRLLLLFPLAQNRSSFLGVLSQRRASLEGLKMVALPQPCRPR PQQGRHRSRDQCCCATTRKSHSTSSWDSTSLQVEENQPSPHLNPGLSPGLKLLAGLGEQQ LLTYFHRYIAVSEAEEVRQVLWLSVVLYKSPESELTCCLLLSTDTIYFLLEDSASTLGHN SVLDIMDSGDVDVCLCCCLSIRLSDLLSVNVGLFDQYFRVVGRSADHIVCCLSRDSYGTG VFLQELMSALSLQQQLPPPEPSDQDFYSQFTSTNTGKMQNYELVHSSRVKFIYPSEEEMG DLTFIVAERKAPASAASSSSRSFNVLLYLLVFQVQIPGSLPSQGSTLSGHSSVSGSGTSP VLQPRTLILTSTDVFLLDEDYVSYPLPDFAKEPPSRERYQLREARRIRDLDRVLLGYQTY PQALTLVFDDLPGPDLLCHLTMDHFAAAGEDALPGGGGASSGAEGEVQWCVFVPGADSRE RLISLLARQWEALCSRELPVELTG NT seq 4575 nt NT seq  +upstreamnt  +downstreamnt atggagcccgacacgtttgcagaagaggtttcgcagaggaaagtgtgtgtcgtcggctcg gagctggtggaaaactacactgtctatatcatcgaggtttcggatggagagcacagatgg actgtgaagcaccgctacagtgacttccacgatctccacgagaagctgacggcagagaag aaggtggaccgagggctgcttcctccaaagaagatgttggggaagaactcaaagagtctg gtggagcggcggcagaaggagctggaactctacctgcagacgctcctgcagcagttccca caggccacgcccactccgctctcctgcttcctgcactttcacctctatgagatcaacggc atcacagcagctctggctgaggatttgtttaataaaggtgagcagctgctgcaggctggc gaggtgttttctctccgtccgctgcagctcttctccgtctcccagcagctccgtctggcc aaaccaacctgctgtaacggagacgccaaaaccgacctgggacacatcctggacttcacc tgcaggctgcgatacctcaaggtgtctgggaccagtggcccagtaggaaccagtaacatc caggagagcaacctccccttcgacctgtcagtcttcaaatcactgctgcagatagagatc agtgagtgcagctctcagcagattcaaggtctgtcgtctctgaggtcgagtctggcaact ctgagtatccaccactccacggaaactatgacgtcgatcctggtcccggaggcgagcgag ttctcacagtgggaggctgagggggcggagtctggctgtcccgtcaccgccgtcatcccc gtgtggagaaacctgaccacgctggacatgagccacaacggcatcggcatcatcgacagc tcagtgaaactgattcctaaggtggagtttcttgatctgagccacaaccagctgtctaca gtggaaaacctccagcacctgtacaatctggtccacgtggatctgtcctacaacaacctg ctggtcctggaagccgctcacacccgtctgggcaacatcaagactctgagcctggccgga aaccagctggaccaactgaccggcctcaccaagctctactcgctggtcaacctggacctc agccacaaccagctggcccaattggaggagatcaggaacatcggatctctgccgtgttta gagaaactcaacctgtccagtaaccccatgtgcatcatcccagactacagaaccaaagtc ctgacccagtttggagaccgtgcagcagaggtttgtctggacggtacggtgacgacagag aaggagctggacacagtggaagtgttgaaagccattcagaaagccaaagaagtcaaagac agaatgagcagcggcgacaagaagatcagtgaggagaccaagctgtctgccgctgctgca cctcctcacctctcctctcccccctctccttcctcctgctgctcctctgctgttgctcct cctgctgtcacctcttcttcctcctcctcctcctcctcctcctcttcttccacctccacc tccacctcttccacctccacctcttcctgcccggcccagcaggctgcctgccccagccaa gacatgacgagcagagaagaagaagcagttcccccgactgttctccctcctgtggacgct gctcctccccccgcaagctttaacactaatacacacctcctgtctgctgaacccgcccag gtacaacaagctgctgtcagtctgtctgaacacaaactctgtggagctcctccaagtgtt actactaccactactacaaataatatcagttgtgtctgctgctctccctcctccagacct cctgaaacctcgtgcttctcctgcagcgcttccttgtttcctcatcttccttctcacctg ctctccctctcctcctccaacaaagacttcattacccagctctcccagcgtctcggctcc atcctgaaggagcagaggacggagacggaggaggaagagaaggaggaggaggaggaggag aaagaggatgagacgaggtctgaatccagagaggttcagtcccatgtggaggtcaccgag gtgggaagtcccagtccaggctctggggacggatacttcgagatgggtctggatgactct gtagaggagtccgtctgctcctcttcctccacgtcgctcgccgttcctcctgcagatgag cttgatggccaccagggggagctgtgtggagaacatgaggaggacgaggtgcagctcagg agggttctgtggtgctactgtctccaggtgaaggaggaggtggagcagaaggaggtgtgt ctggtgctgatggaccggcagttgggcctgctgttcctgtcagatgatgtcacagggacc aatcaggacgcagacccggagcagagtcggcctgtggaggaggtgctgtccagtctacag gtggacctcctgctgccgtactcccagctccttctctcctgcagcgccgacctccctgac tcctgcctcgcctttggcctccacaacggtctgacccgctggtacctcttctctgaggtc gagcagctccggcagaccaggaccgagctgacggcgctgatccaggctgcaaagtctcag actgacccggaccctcccatcactcctcagctcctcccccgctcactcatcaactcctgg gagctggaggagagtcagggagcccagggaggctatcctgcctttctcctcctctcctcc tcctcctctgccgtggacctccaccctctcctgtcagacatcctctccgagagagacgac tccaccctcccctccatcctcgttctcacccaccgacacctctgggtgctgaagatggac ttcagagagctggcagagagagagaggatgaggagtgctgaccttcatcactcctcctcc tcttcttcttcctcctcctcctggtgcaggctggtccgtgtgcccctcggctccgtggtg cttcaccccagagagagagcttctccggtcggggacagaagcagcagcacctcctgcccc gacccaaaacaccgctacaggaggactcgcactgtggagctgctgctgggcggtcagagg ctgctgctgctcttccctctggcccagaacaggagctccttcctgggggtgctgagccag cggagagcctctctggagggtctgaagatggtggccctgcctcagccctgcaggccccgt ccacagcaaggccgtcacagatccagagaccagtgctgttgtgccactacgaggaaatcc cacagcaccagcagctgggactccaccagcctccaggtggaggagaaccagccgtcaccc cacctcaacccaggtctctccccaggattgaagctcctggctgggctcggagaacagcag ctactgacctacttccacagatatatagcagtgtctgaggcggaggaggtgagacaggtc ctgtggctgtctgtggttctctacaagtctccagagtctgagctcacctgctgcctgctg ctctccacggatacaatctacttcctgttggaagactccgcctccacactcggtcataac tcagtgttggacataatggactctggagatgtggacgtctgtctgtgctgctgtctgtcc atcagactgtctgaccttctgtctgtcaacgtgggactgttcgaccagtacttcagagtc gtaggtcgttcggcagatcacatcgtgtgctgtctcagcagggacagttatgggacgggc gtcttccttcaggagctcatgtcggctctcagtctgcagcagcagcttcctcctccagag ccgtctgatcaggacttctactcccagttcaccagcacaaacacaggtaagatgcagaac tacgagttggtccacagcagcagggtgaagtttatttatcccagtgaggaggagatggga gacctgaccttcatcgtggcagagaggaaggctccggccagcgcagcatcctcgtcctca cgctccttcaacgtcctgctgtatctgctggtcttccaggtccaaatccctggcagtctg cccagccagggctccactctctcaggccactcctctgtttctggctctggtacgtctccg gtcctccagcccaggactttgatcctgaccagcaccgacgtgttcctattggacgaggac tacgtcagctatcctctgcccgactttgccaaagaacccccctccagggagcggtaccag ctgcgtgaggctcggaggatccgggacctggaccgggtcctgctggggtaccagacttac cctcaggctctgaccctggtgttcgacgacctgcccggcccagacctgctctgccacctc accatggaccactttgccgccgcaggggaggatgccctgcctggagggggcggagccagc agcggcgcagagggcgaggtccagtggtgcgtctttgtccccggagccgacagcagagag aggctgatctcactcctcgctcgccagtgggaggcgctgtgcagccgggagcttcctgtg gagctcaccggctga

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