Anoplopoma fimbria (sablefish): 129106004
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Entry
129106004 CDS
T09102
Symbol
trub2
Name
(RefSeq) mitochondrial mRNA pseudouridine synthase TRUB2
KO
K23497
mitochondrial mRNA pseudouridine synthase TRUB2 [EC:5.4.99.-]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
afb03029
]
129106004 (trub2)
Mitochondrial biogenesis [BR:
afb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
129106004 (trub2)
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
PseudoU_synth_2
TruB_C_2
TetR_C_32
Motif
Other DBs
NCBI-GeneID:
129106004
NCBI-ProteinID:
XP_054473271
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Position
17:16522354..16525788
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AA seq
331 aa
AA seq
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MATPAVRMLRKLEGLFCVYKPSGVHWKLVRDSIETNLLKGINATPSQPIPQEVRFLSHPV
SETEAPKGLTLSAASVPVLSKHPLVTGPEFKHIRVGVGHRLDAFSSGVLVLAVGNGNKAL
NDFYGTVATREYTLEGEFGSATDDFSHTGKVVERSTYDHITQDKLDRVLAMLEGANQKTL
LMYSKVDMRSQEAYEMAVHGLLGPEGKSHPILTGLRCVRFQPPNFTLEVQCLNETQKYLC
KVVHEIGLELRSTAVCKGVRRTRDGPFTLQDALIHHHWTANDVLQAIRKYHSYKKNQKYS
DTHIKDPAFQPREERTKMVEKNTTSDKEAVG
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcaactccagctgtgcggatgttacggaagttagagggtctgttttgtgtgtataaa
ccctccggtgtccactggaaactcgtccgggatagcattgagacaaatcttcttaaaggt
ataaatgctacaccgtcccagccaattcctcaggaggtccgcttcttgtcgcacccagtc
agtgagactgaagcacccaagggactcacactgtctgcagcctctgtgccagtactgtcc
aagcatcctctggtgactggacctgaattcaaacatattagagttggagtaggacatcgg
ctggatgcgttctcttctggtgttctggttcttgctgtcgggaatggaaacaaggctctg
aatgatttctacggaacagtagccacaagggaatacactttggagggtgaatttgggagt
gcaacagatgacttctctcacacaggcaaagttgtggaaagatccacttacgatcacatc
acacaggataagctggacagagtcttagcgatgctggagggagccaatcaaaagaccttg
ttaatgtattccaaggtcgacatgcgctcacaggaagcctatgagatggctgtgcacggt
ttactgggtccagaggggaaatcacatcctattttgacaggcttgcgttgcgttcgcttc
cagccccccaacttcactttagaggtgcagtgtttaaatgaaactcagaaatatttgtgc
aaagtcgtgcatgagataggcctcgagctgcgcagcactgcagtgtgtaaaggagtaaga
cggaccagagacggacccttcaccctgcaggatgctctgatccatcaccactggactgct
aatgatgttctacaggccatcagaaaataccactcctataagaaaaatcaaaaatattct
gacacgcatatcaaggacccagcatttcaaccacgagaagagagaacgaagatggttgaa
aaaaatacaaccagcgacaaagaagcagtaggttga
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