Anoplopoma fimbria (sablefish): 129106007
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Entry
129106007 CDS
T09102
Symbol
hcn4
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129106007 (hcn4)
Ion channels [BR:
afb04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
129106007 (hcn4)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
LPD1
Motif
Other DBs
NCBI-GeneID:
129106007
NCBI-ProteinID:
XP_054473279
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All DBs
Position
2:complement(11167416..11227015)
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AA seq
1461 aa
AA seq
DB search
MDRLHSSMRKRLYSLPQHIGQKASIMGEGEDADKDTRRKSLRMKPLPSPSPTSAGSCKGI
GETKSGECGMMETDIGRPMKTSSNGDCRRFRGSLSSITSRHVHDSDSAEERRLITEGDVS
PSEESPPGAVGDGPPDQGAQGASGGGGGGGGGGGTLKDSPDQQPGFIKLDGIDQILPDDE
RLYQAGFIHRQLGAMLQPGVNKFSLRMFGSEKAVEREQERVKSAGFWIIHPYSDFRFYWD
LTMLLLMVGNLIIIPVGITFFKDEHTPPWIVFNVVSDTFFLMDLVLNFRTGIVKEDNTEI
ILDPQQIKIKYLRSWFVVDFISSIPVDYIFLIVETRIDSDFYKTARALRIVRFTKILSLL
RLLRLSRLIRYIHQWEEIFHMTYDLASAMVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFP
PDCWVSKNKMVNDTWGQQYSYALFKAMSHMLCIGYGMYPPVGMTDVWLTILSMIVGATCY
AMFVGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADMRQRIHDYYEHRYQGKMFDE
ESILGELNEPLREEIINFNCRKLVASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREG
TIGKKMYFIQHGVVSVLTKGNKETKLSDGSYFGEICLLTRGRRTASVRADTYCRLYSLSV
DNFNEVLEEYPMMRRAFETVAVDRLDRIGKKNSILQHKVQHDLSSGELDYHESEIIQQIV
QHDRDMATCAHLFQNVPLQTPPSPTPVIWAPLIQAPLQAAAATTSVAIALTHHPHLPQTI
FRPPVNFLGSLKDPPSRLKKFHTFVPPSTAPGSAGDSPSSTPSKLHSGADMPLLASFRAL
HMTSGTGPTGSSQQASGSGGQHGPSGTGSGSSGGGASAFPFGPFSSSGSPSSSMAQLHPQ
PQHQQPFRSSTPPLSNLFRQGSTGGSTGSGISGGAVGACGGATGWSSGGAVGGSVEGAMG
GDTSWAGEDFTTGKTGLLPGAHFGSGGDTGGSVVEISGDSMGGISEGSVGVACGRLAGGA
SGGSAGGITCVSIGDAARRSMGGTLRGSMGRASGGSVGGASGESLVLKTTGGSLGKASGG
SIGGVSGGLTGGTSRGPLGGVSGDSMVGNPGGLLGRFSDGSTTSHIGGIGGVSGPGGVVI
GGHIGTRASGGALGSHMGSSTACPVGSTSAGITAGLLGSSCCQSPISTGSSSPLPGQLLH
SQTPPKTPQVAPLQQFAGGGRTTSGLNLFCSPPHGSPSSSRGQHSQQPVEGSQSSLSHFS
LASLQSGLLPHQMSLERSALASLAQYGSANASPCLTPVAPSPTIQSPVAGRTFHYSDPSS
VTGSHSSLLMPQSSFPSQPPSQPHTTERDSPLGLFSEDLKFLSSSHPSLPQEVAPALGHH
TACSSVETGYYPSPFSSPTLVPKPCSSVPEHMTPPIHMSPGHPHPTQSPGASPALPLQRA
SAAYSSDLEPQTVRSKLPSNL
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atggacaggttacactcctccatgcgtaaaaggctctacagcttgccacagcacattgga
cagaaagcatctatcatgggagaaggagaagacgcagacaaggacacccggaggaagagt
ctcaggatgaagcctctaccgtcaccgtcgccgacctctgcgggaagctgcaaaggcatc
ggggagaccaaaagtggggagtgtgggatgatggagacggacatagggagaccgatgaag
accagctccaacggggattgtcggaggtttcgaggcagcctctcgtccatcacaagtcgc
catgtgcacgactccgactctgcggaggagaggcgcctcatcaccgagggggatgtcagc
ccgagcgaggagagcccccccggagccgtgggcgatgggccgccggatcaaggcgcgcaa
ggggccagcggtggtggtggtggtggtggtggtggtggtggtaccctaaaagactcccca
gaccagcagccggggtttataaagttggacggcattgatcaaattctgccggacgacgag
aggttatatcaagccgggttcatacacagacagttaggagcgatgcttcagccaggggtc
aacaagttctccctgaggatgtttggaagtgagaaggcggtggaacgagagcaggagcgg
gttaaatccgccggattttggataatacacccgtacagtgatttcaggttttactgggac
ttgaccatgctgctgctgatggtgggcaacctcatcatcatccccgttggcatcacattc
ttcaaggatgagcacacgcccccctggattgtgttcaacgtggtgtccgataccttcttc
ctcatggatctggtcctcaatttcaggactggtatcgtcaaagaggacaacacggagatc
atcctggacccgcaacagatcaagatcaagtacttgcggagttggtttgtggtggacttc
atctcctccatccccgtggactacatcttcctgatcgtggagacgcggatcgattcggat
ttctacaagacagcgcgcgccttgcggattgtccgcttcacaaagatcctcagcttgctg
cgactcctgcgtctctctagactcattcgctacatccaccaatgggaagagatcttccac
atgacctatgacctagccagcgccatggtgaggatagtcaacctgatcggcatgatgctg
ctgctgtgtcactgggacggctgcctgcagttcctggtgcccatgctgcaagacttcccc
cccgactgttgggtgtccaaaaataagatggtgaatgacacatggggacagcagtactcc
tacgcacttttcaaagctatgagccacatgctgtgtattgggtacggcatgtaccccccg
gtgggcatgacagacgtgtggctgaccatcctcagcatgattgtgggtgctacctgctac
gccatgtttgtgggccacgccaccgcgctaatccaatccctcgactcatctcgacggcag
taccaggagaagtacaaacaggtggagcagtacatgtccttccacaagctgccagcagat
atgaggcagagaatccacgactactacgagcaccgttaccagggcaagatgttcgatgag
gaaagcatcctgggagagctgaacgagccgctgcgagaggaaatcatcaactttaactgt
cgaaagctggtggcgtccatgcctctgtttgccaacgctgaccccaactttgtcacctcc
atgctcaccaagctgaggtttgaggtgttccagcctggggattatatcatcagggagggc
accatcggcaaaaaaatgtacttcatacagcacggggttgtcagcgtactaaccaaaggc
aataaagagaccaagctgtcagatggctcctactttggagagatttgtttgctgacgcgg
ggcagaagaacagccagtgtccgagcagacacatactgtcgcctgtactctctgtctgtg
gacaacttcaatgaggtgctagaggagtatcctatgatgagaagggcatttgagactgtt
gccgtggacagactggaccgtattggcaagaaaaactccatcctgcagcacaaggtgcaa
cacgacctcagctctggtgaactcgactaccacgagagtgagatcattcagcagattgtg
cagcatgacagggatatggccacctgcgcgcacctctttcagaacgtcccactccagacg
cctccttcacctacacctgtcatctgggccccactcatccaggcccctctccaggcagca
gctgccaccacctcagtagccattgccctgacacatcatccacaccttccacaaactatt
ttcaggcctccggttaattttctggggtccctaaaggaccctcccagccggctcaagaag
ttccacacatttgttcctccatccacagcacctggctctgctggggactccccctctagt
acaccctctaaactgcacagtggggcggacatgccattgctggcctcttttcgggccctg
cacatgacgtcaggtacagggccaactggctctagtcagcaggcctcaggtagcggcggc
cagcacggacctagtgggactggctctgggtccagcggaggaggggcctctgccttcccc
tttggaccattctcttcatctggttcaccctcatctagtatggcccaactacacccacaa
ccacagcatcaacagccatttcgctccagcaccccacctctctcaaacctcttccgccaa
ggatctacaggtggaagcacagggtcaggaataagtggaggggcagttggagcctgtggt
ggtgctacagggtggtcttcaggtggagcagtcggagggtctgtggaaggagccatggga
ggagacacttcttgggctggagaggactttacaacaggaaagacagggctactgcctggg
gcgcactttggatctggaggtgatactggtggatcagtagtcgagatctcaggggactca
atgggagggatatctgaaggatcagtgggtgttgcttgtggcaggttagcaggtggggca
tcagggggatcagcggggggcataacctgcgtgtcaataggagatgcagccaggagatca
atgggagggactttaaggggatcaatgggaagagcttctgggggatcagtgggaggggct
tctggagagtcactggtattgaagaccactggaggatcattgggaaaggcttctggtgga
tcaataggaggggtttctgggggattgacaggagggacctctaggggaccacttggaggt
gtgtctggtgattccatggtagggaatcctggaggattgttgggaaggttttctgatgga
tccacaactagccatataggaggtataggaggtgtgagtgggccagggggagtggtgata
ggtggacatattggcactagagcatcaggaggagcattagggagccatatggggagttct
actgcttgtcctgtaggcagtacttctgctggaattacagctggacttcttggttcctcc
tgttgtcagagtcctatatctaccggctcatccagccctttgcctggtcagctactacat
agccagacacctcccaagacgcctcaggtagcacctttgcagcagtttgctgggggaggc
aggactaccagtggcttaaacctcttctgttcccctccacatggctccccatcctctagc
agaggacagcacagccagcagcctgttgaggggtcccaatcctccctcagccattttagc
ctggcaagcctccagtctggcttattgcctcaccagatgtccctggagaggtctgccctg
gcctccctggcccagtatggttcagcaaacgcctccccctgccttaccccggtggcaccc
agccctactattcaaagcccagtggcgggcaggactttccactacagcgacccctcgagt
gtcacgggatcccacagttctctgctcatgcctcagtcttctttcccttcacaacctccc
agccagccacacacaacagaaagagattctccactgggcctcttttctgaggacctaaag
tttttatcaagctcgcacccatctctgccccaggaggtggccccggccttaggccaccat
actgcttgctcctctgtggaaactggatattacccctcacccttttcttcgcccactctt
gtgcccaaaccttgtagctcagtgccagagcacatgactcctccaatccacatgtctccg
gggcaccctcacccgactcagtcccctggggcctccccggccttgccgttacagagggcc
tctgctgcctactcatcagatctagaacctcaaactgtccgctctaaactcccttccaat
ttgtga
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