Anoplopoma fimbria (sablefish): 129106042
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Entry
129106042 CDS
T09102
Symbol
larp4ab
Name
(RefSeq) la-related protein 4 isoform X1
KO
K18763
la-related protein 4
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129106042 (larp4ab)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
129106042 (larp4ab)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
La
RRM_fung
Motif
Other DBs
NCBI-GeneID:
129106042
NCBI-ProteinID:
XP_054473321
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Position
17:complement(13883277..13895629)
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AA seq
777 aa
AA seq
DB search
MPARCRGRRGGVLVTTKGAGLNPNAKVWQEIPAHQNDIPEGTEDSPWLLTYPPPAEMAED
VPSSGVKGSDAEYPDKTADYASVPTEGIENGTDHPDSGYLAFDPQCESAIDADASEEQPM
SEESLRESLKKQLEFCFSRENLSKDLYLISQMDSDQFVPIWTIACMEDIKALTTDVTLIL
DVLRASPMVQVDEAGEKVRPNHSRCIIILREVPETTPIEEVEALFQSENCPKVLSAEFAH
NSNWYITFQSDMDAQQAYRYLREEVKTFQGKPIMARIKAINTFFGKNSFRSVDTSVYSQH
AQPQAQYSSQVYMQQAYSPQQQYPVYPVVSPSWNPAVIPYFETPLAPFPHSGFMNGYSSP
GNYEANTSSINTHRPMSRNRNHVKGHPRPGDVPSSQAPVPLMDGLSGPSSPQPFQTSGMA
SGTTSATASLPSFGFKDSSSQATIPSGYLSASTRGRRGSYRGMRRKREDEHTTRPVPLME
AKVTPPPKFDLAASNFPPLPGSVVSMRGENMPEMRLSDVVRGLKVTNKPVNKEVNGSKKT
NLSEDAVSKPDAVTQPDAVTPVAKLAPVAPLAVAPLAVAPLAVAPLTVAPPVLSVSPPVK
EEEKAEPSIPNENISTASQPASQPASPTASKPAPTACSQSVSTEAPSSSPPSPTSDLGAK
KLSYAEVCQRLAKDPPPAQTPSPSPPASSAGQPLQELKANKVEEPRANSRRSTEKPGDSR
PPRQPLRSFRGANGQARSGAMKIRDHPRGLNTGKPFSPHRGPRRSGKEQNIPPRSPK
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcacgttgcaggggacgacgcgggggggtgttggttaccacaaagggagcaggt
ctgaaccccaatgctaaagtgtggcaggagatccctgcccaccagaatgacatcccagag
gggactgaggattctccttggctactgacctacccccctcccgctgagatggccgaagac
gttccttcttcaggggtaaaaggatccgatgctgaataccctgacaaaactgctgactat
gcctctgtacccacagagggcattgaaaatggcactgaccaccctgactcagggtattta
gcctttgaccctcaatgcgaatcagccatagatgctgatgcttctgaagagcaaccaatg
tctgaggagagcctaagagagtccttgaagaaacagctcgagttctgcttttctagagag
aacctgtccaaggacctgtacctgatatcccagatggacagtgatcagtttgttcccatc
tggaccattgcttgcatggaggacatcaaagcccttaccactgatgtgaccctcattctg
gatgtactgcgagcctcgcctatggtgcaagttgatgaagctggagagaaggttcggcca
aaccacagtcgctgcatcatcattctgagagaggtgccggagaccacacctattgaggaa
gtggaggctctttttcagagtgaaaactgtccaaaagtgttaagtgctgagtttgcacac
aacagcaactggtacatcacatttcagtctgatatggatgcacaacaggcctacagatac
ctacgagaggaagtgaaaacattccagggaaaaccaatcatggcccgcattaaggccatt
aacacattctttggtaagaacagcttccgcagtgtggacacaagtgtatacagtcagcat
gcccaaccgcaggctcaatatagctcccaagtctacatgcagcaggcgtacagccctcag
cagcagtaccctgtgtaccctgtggtgtcgccctcctggaaccctgcggtcatcccctac
tttgaaacgccactggcacctttcccgcacagtggattcatgaatggttacagcagccct
ggaaactacgaagcaaacacaagctccatcaacacccatcgacccatgagcaggaaccga
aaccatgttaagggtcaccctaggcccggagacgtgccttcttctcaggctccggtgccc
ctgatggatggcctgtctggtccctcgagtccgcagcccttccagacatcagggatggct
tctggcaccacttcggcaacagcttctctaccatccttcggctttaaagacagttcttca
caggccaccatacccagtggatatctgagtgcgtctacacggggaaggagaggtagctac
agaggcatgaggaggaaaagagaagatgaacataccacgaggcctgtccctctgatggag
gccaaggtaactcctccaccaaagtttgacctggcagcttccaattttcctcctttgccg
ggatctgtggtcagtatgcggggagagaatatgccagagatgcgcctttctgatgttgtg
cgtggcctaaaggtgacaaacaagcctgtgaacaaagaggttaacgggtccaaaaaaaca
aacctctctgaagatgctgtaagcaaaccagatgctgtgacccaaccagatgctgtgacc
ccggttgctaaacttgctcctgtggcaccactcgcagtggcaccactcgcagtggcacca
ctcgcagtggcacctctcacagtggcaccaccagtcttaagtgtttctcctccggtaaag
gaagaggaaaaagctgaaccttctatcccaaacgaaaacatctccacggcctcgcagcct
gcctcgcagcctgcctccccaacagcatccaaacctgctcccaccgcctgcagccagtct
gtttctacagaagcaccttcttcatctcccccatctccaacatcggacctgggggcaaaa
aaactgagctatgcagaggtgtgccagcggctggccaaggacccgcccccggcacagacg
ccctctccctcccctcctgcctcctcagctggccaacccctgcaagagctcaaggccaac
aaggttgaggagcctcgggccaactccaggcgctctacagagaaacccggagacagccgc
ccgcctcgtcaaccgttgcgctccttcagaggggcgaatggccaagccagatccggagca
atgaagattcgggaccatccgagaggcttgaatactggcaaaccattttccccacacagg
ggacccagacgcagtggcaaagaacagaacattcccccaagatctccaaaataa
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