Anoplopoma fimbria (sablefish): 129106083
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Entry
129106083 CDS
T09102
Symbol
ap5b1
Name
(RefSeq) LOW QUALITY PROTEIN: AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afb03400
]
129106083 (ap5b1)
DNA repair and recombination proteins [BR:
afb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
129106083 (ap5b1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
129106083
NCBI-ProteinID:
XP_054473382
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Position
17:complement(9941272..9946392)
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AA seq
955 aa
AA seq
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MAENWAERISAFSHSPSRFLSGTTAEAFLAELLRELRDDRASYSVKVLLLSPLCEHPTLL
CPSDSVGEETALELMSVLDQCPPKSVQFRCHLLLALTSVLVCTSCVSIRSCASQDFLDLL
LQMAQDTGDLHGDGALRSLRATACDCLRELEACSPGLLSQRLELLGGLRQQETSRLHQAY
AGLHTLVLRNAVYQLTQDKRAGAEHLKALLGGNASVAWEAEQDTGPMNDKDPSAILSSLI
LGPMGTVPTLQTGPDCKELRSVLSSLLEESYLLTPLCQAALLHRLIEVVAMVPGVTPAVF
RAELLRLLGTSEVSLLHTTLLMKSAFTDSLFSAEDEAFILQRLVVLSQHPLLTTPEKLFY
MDCLLHFPENRPIGCGGDGDESLPVLLTPRLASALAPTVFNDSATALARINLLSLVYLEE
AEXGEGEESRGLAFLYEHLTSLLRVVANGGGREIVVTFFRAAFLFLSYFCHVEHYCHSLT
EELCKLYLRHTRLAPHVINLADQVQDKLAESDWAVGFLRALQGVIAEAPXARLTSRDLSW
HLKTLARVAEEGEIPQDSTVSFLSSVIAPSSSAPCASGDWRLGNSLLGVCRRLLVHPSLD
ALLLPLADVLQHLTHRYGDTDIQDHARLYYALLTTLSREKLARVLAQGSAEGGRQVKKRT
LSCIVAESEGLASTLSIHQTERSIFQLIEARSEPQGETQTDKGSDLNQNETEPAEAKAAL
VEYRAQFDVPGFASEITLNYQLTHIADANDSHFDQLFSIHVHFSLTDDHYEELADISVPC
LIRGRPAPEVRLRLKPRRPYPTTLNASAIFTTQDGLSWLTDLPQVHVAFQQAFARLPAPP
AWGRSGRLSLFEGLWDEIGAEDSADCATSLFCCQLKEGTLAALVEKHFLPYLISDLSDEE
EFKVLFFLPPRSHVLLKIQPGDPVHFNIATDNWQLLRHLNSYLLTITSSQEDTLL
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaactgggccgagaggatctccgctttctcccacagtccgtctcgcttcctc
tccgggacaacagccgaggctttcctcgcagagctgctccgggagctccgagatgacaga
gccagttacagtgttaaggtcctcctgttgtccccgctgtgtgagcacccgactctgctg
tgtccctcagactcggtgggcgaggagacggccctggagctcatgtcagtgttggaccag
tgtcctcccaagtccgtccagtttcgatgtcacctcctcctggccctcacctccgtgctg
gtctgcacctcctgcgtgagcatccgctcctgtgcatctcaggacttcctggacctgctc
cttcagatggcccaggataccggtgacctgcacggggacggggctcttcgctctctccgg
gccacggcatgcgactgcctgcgggagctggaggcctgctccccaggccttctctcccag
cgcctggagctcttaggtgggctccggcagcaagaaacctcccggctccaccaggcctac
gctggactccacaccctggtgttgagaaacgccgtgtatcagctcacccaggacaaaagg
gctggtgctgagcatctaaaggctcttctgggaggaaacgcatcggtggcatgggaggca
gagcaggacacaggaccaatgaatgacaaagacccctcagccatactgtcttctctcatc
ctgggacccatgggtaccgtgccgaccctccagaccgggcccgactgtaaggagctgcgt
tcggtcctgtcctccctcctggaggagtcctacctcctgactcctctgtgccaggctgca
ttgctacatagactgatagaggtggttgccatggtgcctggtgtcactccggccgtattc
agagctgagctgctgcgactgctgggcacgagtgaggtttccctcctccacaccactctg
ctgatgaagtcagcgttcaccgacagcctgttcagcgccgaggacgaagctttcatcctc
cagcggctggtcgttctctcccagcatcccctgctgactacgcccgagaagctgttctac
atggactgcctcctgcacttccccgagaaccggccgatcggctgcggtggcgacggcgat
gagagcctccccgtgctgctgaccccgcggctggcctcggcgctggcgcccaccgtgttc
aacgacagcgccacggcactggcccgcatcaacctgctgtctctggtctatctggaggag
gcggagnngggggagggggaggagagcagggggctggccttcctctacgagcacctcacc
tcgctgttgcgcgtcgtggcgaacgggggcggccgggagatcgtggtcacctttttcaga
gccgccttcctcttcctgtcctacttctgccacgtggagcactactgtcacagcctgacg
gaggagctgtgtaagctctacctccgccacacccgcctggccccgcacgtcatcaacctg
gccgaccaggtccaggacaagctcgcagagtccgactgggcggtggggtttctgagggcc
ctccagggggtcatcgccgaggcccccncagcccggctcacctcacgagacctgagctgg
cacctcaagacgctggcccgcgtggcagaggagggagagatcccccaggacagcaccgtc
agcttcctgtccagcgtcatcgctccgtcttcatccgctccgtgcgccagcggcgactgg
cgccttggtaacagcctgctgggggtttgccgccgcctccttgttcaccccagcctggac
gcgctgctcctccctctggccgacgtcctgcagcatctcacccaccgctacggagacacg
gacatccaggaccacgcccgcctctactacgcccttctgaccacgctgtccagggagaag
ctggcccgggttctggcgcagggttccgctgagggagggcggcaggtcaagaagcgaacg
ctgtcctgcatcgtggcagagagtgagggcttggcgagcacgctaagcattcaccagacg
gagaggtcgatattccagctgatcgaggcccgttctgagcctcaaggagaaacacagact
gataaaggaagcgacctaaaccagaatgagactgaaccggcagaggccaaagcagctctg
gtagaataccgagctcagttcgacgtccccggcttcgcctcagaaatcaccttaaactac
cagctgactcacatcgccgacgccaacgactcccacttcgatcagctcttcagcatccac
gtccacttcagcctcacggacgaccactatgaagagctggccgacatcagcgtcccgtgt
ctgatcagagggcggccggcgcccgaggtcaggctgaggctgaagcccaggaggccctac
cccaccacgctcaacgccagcgccatcttcaccacccaggacggcctctcctggctcacc
gacctgccgcaggtccacgtggccttccagcaggccttcgctcggctgcccgctcccccg
gcgtgggggcgcagcggcagactgagcctgttcgagggtttgtgggatgagatcggcgca
gaggactcggcggactgtgctaccagcctgttctgctgccagctgaaggaggggactctc
gctgccttggtggagaaacacttccttccctacctcatatcagacctgagcgatgaagag
gagttcaaagtgcttttcttcctcccgccacgctctcacgtgctcctgaagatccagccg
ggagaccccgtgcacttcaacatcgccacggataactggcagcttctgcgtcaccttaat
tcttatctactgacaatcacgtcctcacaggaagacactttactgtga
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