Anoplopoma fimbria (sablefish): 129106193
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Entry
129106193 CDS
T09102
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129106193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afb03021
]
129106193
03036 Chromosome and associated proteins [BR:
afb03036
]
129106193
Transcription machinery [BR:
afb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
129106193
Coactivators
SAGA/TFTC/STAGA complex
129106193
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
129106193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
129106193
NCBI-ProteinID:
XP_054473520
LinkDB
All DBs
Position
17:5994692..6004970
Genome browser
AA seq
841 aa
AA seq
DB search
MDASTDSTTGHDPDKTLVVSGAVTPLPNHQGKVGSYSAQTFNGSQMMNSHNSGSAGSVVG
ATVTSGPGNSGSTVISVNSGPVVSKGLAGAIVHPSSNSVIQTQSVVSSAQPVSQAAAPTV
TLARPPVQTAGSGATLNGNNIVSHAVAANTTGHTGFGMQTQLVNNSQPSNSGSHIIKAEP
PTTIIQSAPLPAVTPGAVGGPRVQSTTVASGPGGIRAPTPQMLAPRLLPQTSPGQPSIGL
HNIQLPPGMVLVRSESGQLLMIPQQALAQMQAQAQGNMAPRTTTPTSVPPGQAPGNTIIS
RQVAPSTIRQGGPAPTSLAATTTLHRPPILQSSVGAAVLGITPRTVGQTAGTTVASVTMS
KETMENVKKCKNFLSTLIKLASTGKQSSETAASVRELVKDLLEGRLEAEEFTSRLYKELN
SSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQLPQPASGRVPSTSPIPTTVVLGSPAPR
LTAPVSGPQLQPGISKPGLSPSLVIQPQQQRAMLKPQVTLPTTPMVTLRNQAPGRIMLGQ
QQVQLKGLQPVPVRPEVTPFSKQVSAASLSMAQKNKLREAGGTFKDEDDINDVASMAGVN
LSEESANILATNSRLVGAVTHSCKDEAFLSCGILQRKMQEIGRRYGVTDLGAEVVNFVSH
ATQQRLQNVLGKVSQVAQQKNYNFKEDDNYEQSSDVRVQLKFFEQLDQLEKQRKEEQERE
ILLKAAKSRARQEDPEQLRLKQKAKEMQQQELAQMRQKEANLTALAAIGPRKKRKILDSP
SSSAAAEGSGSGPSLSGGAGSSGSRPTRQRITRVNLRDLLFCLENERSTSHSHFLYKGFL
K
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgtccacggactccaccacgggacacgaccctgacaaaacacttgttgttagc
ggcgctgtaactcctctgcctaatcaccaggggaaagtaggctcgtactcagcgcagact
tttaatgggagccaaatgatgaactctcacaattcaggaagtgctggctctgtcgtgggg
gcgacagtgacaagtggccctggtaacagcggcagtactgtgatctctgtcaacagtgga
ccagtggtgtcgaaagggctggccggtgccatcgtgcacccctcgtccaacagtgtcatt
cagacgcagagtgtcgtctcctcggctcagccggtgagccaggcagcagcacccaccgtg
acactcgccaggccgcctgtgcaaaccgcggggtcgggtgcaactttgaatgggaacaat
attgtgagccatgccgtggctgccaatacaacaggtcacacgggtttcggcatgcagacc
cagcttgtaaacaatagccagccgtcaaactctgggtcgcacataatcaaggcagagcca
cccacaacaataatacagtcagccccgctgccggctgtcactcctggtgccgtcggcggc
ccccgggttcagtcgacgacggtagcaagcggtcccggcgggatcagagccccgacgcct
cagatgttggccccaaggctactaccccagacctccccgggacagcccagtataggcctg
cataacatccagctccccccggggatggtgcttgtgcgcagcgagagcggacagctgctg
atgattcctcagcaggctctggcccagatgcaggcccaggcacaggggaacatggcacct
cggaccacaacaccaactagcgtacctcctggccaggctcctggaaacaccatcatcagc
agacaagtagcccccagcacaatccgtcaaggcggtcctgccccaacgtcactcgctgcg
accaccactcttcacagacctcccatccttcagagctcagttggggctgcagtactagga
attacccccaggaccgtcggccaaacagctgggaccacagttgcctcagtaacaatgagc
aaagagacaatggagaatgtgaagaaatgtaagaacttcctgtctaccttgatcaagttg
gcctccactgggaagcaatcttcagagactgcagccagtgtgagagagctggtcaaggac
ctgctggagggcagactggaagctgaggaattcaccagcagattgtacaaagagctcaac
tcttctccccaaccttaccttgtgcctttcctcaagagaagcctcccagccctgaggcag
ctcaccccggactcagcagccttcatccagcagagtcagcttccccagccagcctcaggt
cgagtcccctccacctcacccatccccaccactgtggtcctgggcagcccagcgccccgc
ctcactgcaccagtcagcgggcctcagctccagcctggcataagcaaaccaggactgagc
ccctcactggttatacagccccaacaacagagagcaatgttgaaacctcaggtaacctta
cccacaacccccatggtgactctcaggaatcaggcccctggccgcatcatgctgggacag
caacaggtccagctgaaagggctgcagccagttcctgtgaggccggaggtgacacctttt
tctaaacaagtctctgctgcgtccttgagcatggctcaaaagaacaagctgagagaggcg
ggtggcactttcaaagatgaggacgacatcaacgatgtggcctccatggctggagtgaac
ctatctgaggaaagcgccaatatcctcgcaaccaattctagactagtgggagcggtgaca
cattcctgtaaggatgaggctttcctctcctgtggcattttacagaggaaaatgcaggag
ataggtaggaggtatggtgtgacagacctgggtgcggaggtagtgaactttgtctcccac
gctactcagcagcggctccagaacgtgttgggaaaagtttcccaagtggctcagcagaaa
aattacaactttaaggaggatgacaattacgagcagagcagtgatgttcgtgttcagctc
aagttctttgagcagttggaccagctagaaaaacaacggaaggaggaacaggagagagag
atcctactaaaggcagctaagtctcgagctcggcaggaggacccagagcagctgcgtctg
aaacagaaggcaaaagagatgcagcagcaggagctggctcagatgagacagaaggaggcc
aacctaacagctttggcagccatcggtcccaggaagaagaggaagattctggactctcca
tcctcctccgctgcagccgagggatcaggatcgggtccctctctgtccggtggggctggt
tcgtcgggctccagacccacacggcagcgcatcacgcgtgtcaatctcagggacctgctc
ttctgtttggagaacgagagatccaccagtcactcccatttcctctacaagggctttctc
aaatag
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