Anoplopoma fimbria (sablefish): 129106394
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Entry
129106394 CDS
T09102
Symbol
pparg
Name
(RefSeq) peroxisome proliferator-activated receptor gamma isoform X1
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03320
PPAR signaling pathway
afb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
129106394 (pparg)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
129106394 (pparg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129106394 (pparg)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
afb03310
]
129106394 (pparg)
Transcription factors [BR:
afb03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
129106394 (pparg)
Nuclear receptors [BR:
afb03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
129106394 (pparg)
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Ortholog
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GFIT
Motif
Pfam:
PPARgamma_N
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
129106394
NCBI-ProteinID:
XP_054473756
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Position
17:complement(18666407..18696207)
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AA seq
553 aa
AA seq
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MQTPGREFNHQSGHNFPVDMVDTQQLLAWPVGFSLNAVELSELDDSSHSLDMKHLSTLDY
ASISSSSIQSSLSPPLVSSISSAGVAYDPSPPQHEEQLTNMDYTNMHSYRTEPDRHSLIK
LEPESPPQYCDNPVFSKLQDDTSPAALNIECRVCGDKASGFHYGVHACEGCKGFFRRTIR
LKLVYDHCDLHCRIHKKSRNKCQYCRFQKCLNVGMSHNAIRFGRMPQAEKEKLLAEFSSD
VVHMHPEAADLRALARHLYEAYLKYFPLTKVKARAILSGKTGDNVPFVIHDMKSLMEGEQ
FINCKQVPIQEQQQQSSALTAGLGGFIGSHQGSEYGFLGMGTSISGPAPSDALELRFFQS
CQSRSAEGVREVTEFAKSIPGFIDLDLNDQVTLLKYGVIEVLIIMMSPLMNKDGTLISYG
QIFMTREFLKSLRKPFSQMMEPKFEFSVKFNTLELDDSDMALFLAVIILSGDRPGLLNVK
PIEQLQETVLHSLELQLKLNHPDSQQLFAKLLQKMTDLRQIVTDHVHLIQLLKKTEVDMC
LHPLLQEIIKDLY
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaccaggcagagagtttaaccatcaaagtggtcacaacttcccagtagacatg
gtggacacccagcagctcctagcctggcctgtcgggttcagcctgaacgccgtggagctc
tcagagctggacgacagctcccactccctcgacatgaagcatttgtccacattagactac
gcctccatctcctcctcctccatccagtcctccctgtctcccccgctcgtatcctccatc
tcctctgccggtgtggcctatgaccccagtccgccgcagcacgaagaacaactgaccaat
atggactacacaaacatgcacagctacagaacagagccagacaggcacagtttgatcaag
ctggagccggagtcccctccacagtactgtgacaatcccgtgttctccaagctccaggac
gacacgtcgccagcagcgcttaacatcgagtgccgcgtgtgtggagacaaagcttcaggc
tttcactacggcgtccatgcctgtgagggctgtaagggtttcttcagacgcacgatcagg
ttaaagttggtgtacgatcactgtgatcttcactgtcgcattcacaagaagtcccgcaac
aaatgccaatactgtcgcttccagaagtgcctcaatgtcggcatgtcacacaacgccatt
cgttttggccgaatgccccaggcggagaaggagaaactgctggctgagttctcatcagac
gtggtgcacatgcacccggaggcagcagatctgagggctctggcccggcatctgtatgag
gcctatctgaaatacttccccctcaccaaggtcaaggccagggccattctctctgggaag
accggagacaacgtgccttttgtcatccatgacatgaagtctctgatggaaggagagcag
tttattaattgtaagcaggttcccatccaggagcaacagcagcagtcatctgccctaaca
gcaggacttggaggattcataggatctcaccaggggtcagagtatggctttttgggaatg
ggaacaagcatcagcggaccggctccatcggacgctttggagctgcgtttcttccaaagc
tgtcaatcacgttcagccgaaggagtgagagaagtgacagagttcgccaagagtatccca
ggattcatcgatctggatctcaatgatcaggtgactttgctgaagtacggtgtgatcgag
gtcctcatcatcatgatgtcgcctctgatgaacaaagacgggaccctgatctcctacgga
cagatcttcatgacgcgggagttcctcaagagtctcaggaaacctttcagtcaaatgatg
gaaccaaagtttgagttctcagtcaaattcaacacgctggagctggacgacagcgacatg
gctctgtttctggccgtcatcatcctcagcggtgaccgcccgggcctgctgaacgtgaag
cccatcgagcagcttcaggagacggtgctccattcgcttgagctgcagctcaagctgaac
cacccagactctcagcaactgttcgccaagctgctccagaaaatgaccgacctgcgtcag
atcgtcaccgaccacgtccacctcatccagctgctgaagaagacggaggtggacatgtgc
ttacacccactgctgcaggagatcattaaggacttgtattag
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