Anoplopoma fimbria (sablefish): 129106458 Help Entry 129106458         CDS       T09102                                  Symbol hcfc1a Name (RefSeq) host cell factor 1a   KO K14966   host cell factor 1 Organism afb  Anoplopoma fimbria (sablefish) Pathway afb03083   Polycomb repressive complex afb04980   Cobalamin transport and metabolism afb05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:afb00001]  09120 Genetic Information Processing   09126 Chromosome    03083 Polycomb repressive complex     129106458 (hcfc1a)  09150 Organismal Systems   09154 Digestive system    04980 Cobalamin transport and metabolism     129106458 (hcfc1a)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     129106458 (hcfc1a)  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:afb01009]     129106458 (hcfc1a)   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:afb03036]     129106458 (hcfc1a)    03029 Mitochondrial biogenesis [BR:afb03029]     129106458 (hcfc1a) Protein phosphatases and associated proteins [BR:afb01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      129106458 (hcfc1a) Chromosome and associated proteins [BR:afb03036]  Eukaryotic type   Histone modification proteins    HAT complexes     NSL complex      129106458 (hcfc1a)    HMT complexes     COMPASS/SET1 complex      129106458 (hcfc1a)     MLL-HCF complex      129106458 (hcfc1a)    Polycomb repressive complex (PRC) and associated proteins     PR-DUB complex      129106458 (hcfc1a) Mitochondrial biogenesis [BR:afb03029]  Mitochondrial quality control factors   Regulator of mitochondrial biogenesis    Other regulator of mitochondrial biogenesis     129106458 (hcfc1a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Kelch_5 Kelch_3 Kelch_4 Kelch_1 Kelch_6 fn3 Motif Other DBs NCBI-GeneID:  129106458 NCBI-ProteinID:  XP_054473841 LinkDB All DBs Position 17:complement(6707918..6720458) Genome browser AA seq 1721 aa AA seqDB search MSAPGSAVSGTTAAVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWE WKKLKAKNPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELR AGSSVVGWDIPITYGVLPPPRESHTAVVYTEKTSRKSRLIIYGGMSGCRLGDLWTLDIDT LTWNKPSVNGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACL NLDSMCWETVLMDTLEDNIPRARAGHCAVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYL ETERPHAPARVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPATPAAASPVMSATPVQ PLNSPKSPALAAAAPLAQSLTQTAVLKVAAQQSATGTSVVTVRPSQPGKSPVTMTSLPPG VRMVMPAQTTQGSPIGSSPQMSGMAALAAAAAATQKIPPSSAGTVLNVPAGATILKTVSV SPGTTTMKMASPIMVSNPATRMLKTAAAQVGTGTASSPTNTRPIITVHKSGAVTVAQQAQ VVTTVVGGVTKTITLVKSPLTMGGSGTLISNLGKMMSVVQTKPVQTSAITGQASTNPLTQ LIQTKGPLPAGTILKLVTSADGKPTTIITTSQAGGAGNKPTILNISGVSPNTTKQGTTII KTIPMSAIMTQSGATGLNSRVTSSAGMKTPITILTTKVMTTGTPGKIITAMPKLATAAGQ QGLTQVVLKGAPGQPGTILRTVPMSTVGGVRLVTPVTVSSVKPTVTTLVVKGTTGVTTLG TVPGTVSSSLAGATVDSSNASLVTPITTLGTIATLSSQVISPAAITVSAAQTNLTSASTL TSSTMTVQNQPTQVTLITTPSGVEAQPVQDLPVSILASPTSEQPSSSEAGAAGEGSGTVT LVCSNPPCETHETGTTNTATTSSSAMGVGKVCSNPPCETHETGTTNTATTSSSAMGVGKV CSNPPCETHETGTTNTATTASSNMSTPRVCSNPPCETHETGTTNTATTASANMGGVQQLC SNPPCETHVTGTTNTATQSSSTMNAGQTSTVQRVCSNPPCETHETGTTNTPSTATSSMGG DQTSTATGQVQRVCSNPPCETHETGTTNTATTATCNMETGEGTAQQTEEGAEGTSSPEVA AAATTTTTAAAAVMATTTQGRAITTVTQSTPAPGPSVPSISSITEGVSTAASSTEEPMQT DETASAAAAEEGATAMETQAEGEAATASALNLPSELMSEGQGSTLMVTGLSDEELAVTAA AEAAAQAAATEEAQALAIQAVLQAAQQAAVMNEGDSTGESQQPTTIPIMLTQQELAALVH QQQQLQLQEAQAAAQQASVDTNLPTEGLAPADSLNDPSVESNGHNEMAAAVTSAVASLLP RTTAETLAPSSTFAPSVSVASPAKLQAAAALAEVANGIEGEKQAPQPTPVKTVAKKENQW FDVGIVKVTNMVVTHFYMPGDDSQGDDDSGIMPDYGQMKKMELQPGTAYKFRVAGINACG RGSFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSNQ TAEAKASTPAQLAFMRVYCGPNPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPA TQVRWLQESGKDAGSAKPAAKRPGTSPDTKATGPKKARTDQ NT seq 5166 nt NT seq  +upstreamnt  +downstreamnt atgtctgcccctggctccgcggtgtccgggaccacagcggcggttctgcagccgcggtgg aaacgggtcctcggatggtccggtcccgttccccggcccaggcacgggcacagggctgtt gctataaaggagcttatggtcgtctttggcggtggaaacgaagggattgtggatgaatta catgtatacaacactgcaacaaaccagtggtttatcccagcggtccgcggtgatattccc cctggttgtgctgcatatggttttgtctgtgatggtaccagattgctggtgtttggtgga atggtggagtacggaaagtacagcaacgatctctatgaactacaggccagcagatgggaa tggaaaaagttgaaagcaaaaaacccgaagaatggtccccctccttgccctcgtctgggc cacagtttctcgctggttggcaataaatgctacctgtttggtggactagccaatgatagc gaagacccaaaaaacaacattcccagatacctgaatgatctgtacacacttgagcttcgt gcgggctccagtgtggttggatgggatatcccaatcacatatggcgttctgcctcctcct cgtgagagccacactgctgtggtatacacagaaaagacaagcaggaaatctcgcctgata atctacggagggatgagtggttgtcgccttggagatctgtggacacttgatattgatacc ctgacatggaacaaaccatcagtaaacgggacagcaccgctccccagaagtcttcactct gccaccaccattacaaacaagatgtacgtttttggaggatgggttccattggtaatggac gatgtcaaagtggccacacacgagaaggagtggaagtgcacaaacactcttgcctgcctg aatctagactccatgtgttgggagacagtgttgatggatactcttgaagacaacatccct agggcccgtgctggacactgtgctgtggccatcaattctagactctatgtttggagcggc cgcgacggttatcgtaaagcttggaacaaccaagtctgttgtaaagacctctggtacctg gaaacggagcgtccacacgcccctgccagggtgcagttagtccgtgccaacacaaactct cttgaggtgagctggggcgccgtctcaactgctgacacctacttactgcagctgcagaaa tatgacatccccgcaactccagctgcagcctcgccagtcatgagtgccacccctgtgcag cctttgaactctccaaagagccctgcactggctgctgcagcacccttagctcagagccta acccagacagctgtcttgaaggttgcagcacaacagtctgccacaggcacatctgttgtc acagtccgccccagccagcctgggaaatcccctgtcaccatgacatccctcccaccaggt gttcgtatggtaatgccggcccagacaacccaaggatcgccaattgggagtagccctcag atgagtggcatggcagctttggctgcagcagctgcagcaacacagaagatcccgccctct tctgcaggcactgtcctcaatgttcctgcaggtgccaccattctcaaaacagtatctgtt tcccctggcacaaccacaatgaaaatggcttctccaatcatggtcagtaacccggccacc cggatgctgaaaactgctgcggcccaggtgggcacagggactgcgtcctcccccaccaac accagacccatcattactgtgcacaagtctggtgcagtcacagtggcccagcaggcccag gtggtaaccactgtggttggaggagtcaccaagaccatcaccctggtcaagagtcccctc accatggggggcagtggcactctgatctccaaccttggcaagatgatgtctgtggtacaa accaagccagtgcagacatcagctatcacaggccaggcttccactaaccctctcacacag ctcatacagacaaagggtcccctcccagccggcaccatcctgaagctggtgacctccgca gatggcaagcccacaaccatcatcaccacttcccaggcaggaggcgcaggaaacaagccc actatcctcaacatcagtggtgtctctcctaacaccactaagcagggcaccaccattatc aaaaccatcccaatgtcagctatcatgacccagtctggagctacaggtctaaactcacgt gtgacaagcagtgcaggcatgaaaacgcctatcacaatccttaccacaaaggtgatgacc actggaactcctggtaaaatcatcactgccatgcccaaacttgccactgcagccggccaa caggggcttacacaggtggttttgaagggtgctcctgggcaacctggcactattttgcgc actgtgcctatgagcacagtcggtggtgttcgactcgttacccccgtgacagtatcttct gttaagcccaccgtcacaactctggttgtcaaggggactactggtgtcaccactcttggg acagtccctggtacagtctcctcaagcctggcaggagccaccgtggacagttccaacgcc tctctggtcacccccatcaccacactgggaaccatcgctaccctgtccagccaggtcatc agcccagctgccataactgtatcagctgctcagaccaacctgacttctgcctcaacattg acctcctctaccatgacagtgcagaaccagcccacccaggtgactctgatcacaactccc agtggtgtcgaagctcaaccagtgcaggatctaccagtgtccatcctggcttcaccaacc tctgagcagcccagctctagtgaggctggagcagctggagaaggctccgggaccgtcacc ctggtctgctctaacccgccctgcgagacccacgagacaggaaccaccaacacggccacc acctcctcttctgcaatgggagtaggaaaggtgtgctctaaccccccctgcgaaacccac gagaccggaaccaccaacacagccaccacctcctcttctgcaatgggagtaggaaaggtg tgctctaacccgccatgtgagacccacgaaacgggcaccaccaacacagccacaacggca tcatcaaacatgtccacaccgcgtgtgtgctccaacccaccatgtgagacccatgaaacc gggacaactaacacagctaccacagcgtcagctaacatgggaggagtccagcagttgtgc tccaacccaccctgtgagacccacgtgacgggcaccaccaacacagccacccagtcgtca tctaccatgaacgctggccagaccagcaccgtgcagagggtgtgctccaacccgccctgc gaaacacacgagacagggaccaccaacaccccgtccacagccacctccagcatgggtggc gatcagaccagcacagcgacaggccaggtccagagggtttgctccaacccaccctgtgaa acacacgaaactgggaccaccaacacagccaccactgccacctgcaacatggagacaggc gaaggcacagcccagcagacagaggagggagcagaaggtacgagcagtccagaagtggcc gccgccgccaccaccaccaccactgcagcagcagctgtcatggctaccacgactcagggc agagccatcactactgtcactcagtccacaccagcccccggaccctccgtaccttcgatc tcatcaatcacagagggtgtgagcactgctgccagctccacagaggaacccatgcaaact gatgagaccgcatcagctgcagctgcagaggagggagccaccgctatggagacgcaagca gagggagaagcagccacagcttcagccttgaatctgccctcagagctcatgtctgagggt cagggcagcactctcatggtgacagggctgtcggacgaggagctagctgtgactgcagca gcagaggccgctgctcaggcagcagccactgaagaagcccaggccctcgccatccaggct gtccttcaggcagcccagcaagcagcagtaatgaacgagggcgattccactggagagagc cagcagcccaccaccatccccatcatgttgacccagcaggagcttgcagcactggtccat cagcagcagcagctacagctgcaggaggctcaggctgcggcacagcaggccagcgtggac acaaacttgcccactgaaggcctggcccctgctgacagcctcaacgacccctctgtcgag agcaacgggcacaacgagatggctgctgcagtcaccagtgctgtggcatcactgctgcca cgtaccactgctgagacacttgctccatcaagcacatttgcaccctctgtgtcggtggca agtccagccaagctgcaagcagcagctgctctagcagaggtcgccaatgggatcgaggga gagaagcaagcccctcaaccaaccccagtgaagactgttgcaaaaaaagagaaccagtgg tttgatgttggaattgttaaagtgacaaatatggtggtcacccacttctatatgccagga gatgattctcaaggagatgatgactctggcatcatgccagactacggccagatgaagaaa atggagctgcagcccggcacagcttacaagttccgtgttgccggaatcaacgcttgtggc cgtggatctttctctgagatatctgctttcaagacttgcttaccaggcttcccaggggca ccttgcgccatcaaaatcagcaagagcccagacggtgcccacctgacctgggagccgccc tccgtgacgtcggggaagatcatcgagtactctgtgtacctggccatccagagcaaccag acagccgaggccaaggcctccaccccggcacagctagccttcatgcgcgtgtactgtgga cccaacccctcttgcttggtgcagtcgtccagcctctccaacgcccacatcgactacacc accaagccagccatcatcttccgcattgctgcccgcaacgagaagggctacggtcccgcc acccaagttcgatggttgcaagaatctggcaaagatgccggctctgcaaaacccgccgcc aaaagaccaggcacctctcctgatactaaggctactggtccaaagaaagcaaggacggac cagtga

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