Anoplopoma fimbria (sablefish): 129106799
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Entry
129106799 CDS
T09102
Symbol
lrfn2b
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 2
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
afb04515
]
129106799 (lrfn2b)
04990 Domain-containing proteins not elsewhere classified [BR:
afb04990
]
129106799 (lrfn2b)
Cell adhesion molecules [BR:
afb04515
]
Immunoglobulin superfamily
SALM family
129106799 (lrfn2b)
Domain-containing proteins not elsewhere classified [BR:
afb04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
129106799 (lrfn2b)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
ig
LRR_1
fn3
Ig_2
LRR_5
Ig_VEGFR-1-like_5th
LRR_9
Ig_PDGFR_d4
Motif
Other DBs
NCBI-GeneID:
129106799
NCBI-ProteinID:
XP_054473997
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All DBs
Position
18:complement(3577896..3590603)
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AA seq
787 aa
AA seq
DB search
MYDSTMDHIIYCLLVLGATVMTTYACPKYCVCQNLSESLGTLCPSKGLLFVPPDIDRGTV
ELRLGGNYILRITQQDFANMTDLVDLTLSRNTISYIQPFSFGDLETLRSLHLDNNRLIEL
GPDDLRGLVNLQHFIINNNQLGRIHDKTFEDLAPALEDVDLSYNNLISLPWDSVRQMINL
HQLSLDHNLLDFIPEGTFTDLERLARLDLTSNRLQKLPPDPIFARAQDSMMLTTPYAPQL
SLSIGGNPLHCNCEMLWLRRLERDDDLETCASPPNLKGRYFWNVNEEEFLCQPPLITQHT
HRMLVLEGQMAGLRCEATGDPSPTIHWISPEDRLLGNTSRTAVYKNGTLSITITTSKDYG
TFTCIAANVAGESTASVEVSIVQLPHLSNGTGQPAAPKSRLSDITGTTRTSKGTPKSQPE
RTVTVSEVTAVSALVKWTVSKSSPTVKMYQLQYNCSDDEVLIYRMIPSSSKAFLVNNLVS
GTHYDLCVLAAWDDTATTLTATNVVGCTNFFTLDDYPQCQSLPSQLLGGTMILVVGGIIV
GTLLVFIVILMLRYKAADTDPPVGKLTSVSDTHSQTNGGRIGQNGLLMPPTQPQPQPKVK
AKVALQDEVVEFKCGSLQSSLSTSSSSSGSMAGGPYSPNSTLANIWRSAQSKPRTNLDHL
LGAFTSMELRGVQGRDPGAASSAAAAATGKPRTDREPLLGRTLDSSLSRLLMLPLDSKPK
RSQSFDMGDITGSGAAQPSSKSRRFSSIWTKRSLSVNGMLLQCEEEGDTGGSKGTIDGAD
WVMESTV
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgtatgactctaccatggaccacatcatctactgcctgctggtcctgggagccacagtg
atgaccacctatgcatgccctaagtactgtgtatgccagaatctttccgaatccctaggg
acattatgtccctccaaaggccttcttttcgtgcctccggacattgaccgaggcacggtg
gagctccggctgggaggcaactacatcctccgcattacgcagcaggactttgccaatatg
accgacttggtggacctaaccctctccaggaacaccatcagctacattcaacccttctct
tttggggacttggaaacactgcgctcactgcatctggacaacaaccgattgatcgagcta
ggccctgacgacttgcgaggcttggtcaacctgcagcacttcatcattaacaacaaccaa
cttggacgcatccatgacaagacctttgaggacctggcacctgccttggaggatgtggat
ctctcctacaacaacctgatctctctgccctgggactctgtccgccagatgattaatctg
caccagcttagtctggaccacaacctgttggactttattccagagggcaccttcactgac
ctggaaaggctggcgagattggacctgacctcgaatcgcttgcagaagctacccccagac
ccgatctttgcccgagcccaggactcaatgatgctaactacaccctatgcacctcaactg
tccctaagtataggcggaaacccattgcactgcaattgtgagatgctgtggctgaggagg
cttgagagagacgatgacctggaaacttgtgcctcccctcctaatctgaagggtcgttac
ttttggaatgtgaacgaagaggagtttttgtgtcagccacctctcattactcagcacacc
cacagaatgctggtcttggaaggtcagatggccggcctcaggtgtgaagcaactggagac
ccttcccctaccatccactggatctcccctgaggatcggctgcttggcaacacctcccgg
accgcagtgtacaaaaatggaacgctaagcatcaccatcaccacctccaaggactatggc
accttcacctgcattgccgctaacgtggctggggagtccacagcctccgtggaggtgtcc
atcgttcagctcccccacctcagcaacggcaccgggcagccagcggcaccgaagtcacgt
ctctctgatatcacagggacaacaaggaccagtaaaggcactcccaagagccaaccggag
aggaccgtgaccgtctctgaagtgaccgctgtttccgcactggtcaagtggacagtgagc
aaatcatctcccacggtgaagatgtaccagctccagtacaactgctctgatgacgaggtt
ctaatttacaggatgatcccgtcctccagcaaagctttcttggtgaacaatctggtgtcg
gggacccactacgatctgtgcgtgctggccgcctgggacgacaccgccaccacgctcact
gccaccaacgtcgtgggctgcaccaacttcttcaccctggacgactaccctcagtgccag
tctctgcccagccagctgctgggaggcaccatgatcctggtggtggggggcatcatcgta
ggcaccctgctggtcttcatcgtcatcctcatgctgcgctacaaagctgccgacacggac
cccccggtgggcaaactgaccagcgtcagtgacacgcactctcagaccaacggggggcga
atcgggcaaaatggacttctaatgcccccgactcagcctcagccccagccgaaggtcaag
gccaaagtggctctgcaggacgaggtggtggagttcaagtgtggctccctccaaagcagc
ctgtccacttcttcctcatcgtcgggctccatggcggggggtccgtacagccccaacagc
acacttgccaacatttggaggtcagctcaatccaagcctcggaccaacctggaccacctg
ctcggggccttcacctcgatggagctgcggggggtacagggccgagacccgggggccgcc
agtagcgctgctgccgcggcaacggggaaaccccgcacagacagggagccgctgctaggc
cggacgctggactccagcctcagccggctcctcatgctgcctctggactccaagccaaaa
aggagccagtccttcgacatgggggacataacgggctccggggccgctcagccgagcagc
aaatcgcgaaggttcagcagtatctggactaagaggagcctgtctgtaaacggcatgctg
ctgcagtgcgaggaggagggggacacgggagggagcaaggggacaatagacggcgccgac
tgggtgatggagagtactgtgtag
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