Anoplopoma fimbria (sablefish): 129106813
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Entry
129106813 CDS
T09102
Symbol
irx5a
Name
(RefSeq) LOW QUALITY PROTEIN: iroquois-class homeodomain protein IRX-5a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129106813 (irx5a)
Transcription factors [BR:
afb03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
129106813 (irx5a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
Motif
Other DBs
NCBI-GeneID:
129106813
NCBI-ProteinID:
XP_054474022
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All DBs
Position
2:10577795..10581079
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AA seq
448 aa
AA seq
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MAYPQGYLYQPSASLALYSCPAYSTSVLSGPRTEELGRSSSGSAFAPYAGSTAFTSASPG
YSSHLPYSADAAAAATFTSYVGSPYDHASGMAGSIGYHPYASPLGSYPYGDPAYRKNATR
DATATLKAWLGEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPR
NRSEDEEEDENIDLEKNDDDEPNKPTDKGDSTDTEAGDMGCDRFKEESHGKDSDPLLSDS
ELKEXAGAGGAAGGGAADYGAAAAGFRQTHHLVSLVGAPGEPGNQDKPSDLSHASGTVTS
NVTSVIHSPPSAPKPKLWSLAEIATSSDRCKGSSGEAPVCPGLGHSSASPSRSSPQCALP
SSTVLSRPLYYTSPFYPGYTNYGGSFGHLHSTHGPVTTGSTAHFNGLNQTVLNRAEALVR
ESQKVRSQTQIDLCKDSPYELKKGMSNI
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcctcagggctacctgtaccagccgtccgcgtctctagccctgtactcgtgc
cctgcgtacagcaccagcgtgctatcgggacccaggaccgaggaacttgggagatcctcc
tcgggatctgcttttgcgccctatgccggatctaccgccttcaccagcgcctctccgggc
tacagctcccacttgccatacagcgcggacgcggcggcagctgccacattcacctcgtac
gtgggttctccctacgaccacgcttcgggcatggccggctcgataggataccacccttac
gcatcacccttgggtagctacccttatggtgacccagcgtatcgtaaaaacgcaacccgg
gacgccaccgccaccctgaaggcctggctcggcgagcaccgcaagaacccctacccgacc
aagggggagaagatcatgctggccatcatcaccaagatgaccctcacccaggtgtccacc
tggttcgccaacgccaggaggaggctaaagaaggagaacaagatgacctggacccctcgg
aaccggagcgaggacgaggaggaagacgagaatatagatttggagaaaaacgacgacgac
gagccaaacaagcccacagacaagggagactccacagacacagaagcaggggacatgggc
tgtgacaggtttaaagaggagagccatggcaaagactcggatccccttctgagcgactcg
gagttaaaagagncagcaggagcaggaggagcagcaggaggaggagcagcggactacggg
gctgctgctgccggattccgccaaacccaccacctcgtctccctcgtcggtgccccgggg
gaaccagggaaccaggacaagccgtcagatctgagccacgcgtccggcacggtgaccagc
aacgtgacctctgttatccactcgcccccttcggccccgaaacccaaactctggtccctg
gcggagatcgccacgtcctcagacaggtgtaagggcagcagcggtgaggctccggtttgt
cccggtttgggtcacagcagcgcgtccccgtcgcggtcctccccgcagtgcgcgctcccc
agcagcacggtgctctccaggcctctgtactacacctcccccttctaccccggctacacg
aactatgggggcagctttggacatcttcacagtacccacggcccggtgaccacgggctcc
acggcacatttcaatggattaaaccagactgtgttaaatagagcagaggctttggtaagg
gagagccagaaagtcagaagccaaacgcagatagatctttgtaaagactccccttatgaa
ctaaagaaaggtatgtcaaacatttaa
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