Anoplopoma fimbria (sablefish): 129106855
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Entry
129106855 CDS
T09102
Symbol
wdr20b
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 20
KO
K24741
WD repeat-containing protein 20
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
afb04990
]
129106855 (wdr20b)
Domain-containing proteins not elsewhere classified [BR:
afb04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
129106855 (wdr20b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
ANAPC4_WD40
EIF3I
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_NUP159_NUP214
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Ge1_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
129106855
NCBI-ProteinID:
XP_054474086
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All DBs
Position
18:complement(5617697..5628019)
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AA seq
660 aa
AA seq
DB search
MAAEGGGKEMNEIKTQFTTREGVYKLLTHSEYSRPNRVPFNSQGSNPVKVSFVNVNDQSG
NGDRICFNVGRELYFYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNPITATAESVSLLV
GFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVRWVPGSESLFLVAHSSGSMYLYNVE
NTCGTTAPHYQLLKQGENYAVHTCKSKSARNPLLRWTVGEGALNEFAFSPDGKFLACASQ
DGFLRVFGFDAAELHGTMKSYFGGLLCVCWSPDGRYIVAGGEDDLVTVWSFSDCRVIARG
HGHKSWVSVVAFDHCTTSVEDGXPPAEFSGSDEEFHEQIHFGVGRDRANSAHSRLSKRNS
TDSRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHLPLSRTRTHTNVMSATSPPATGQNTT
TATTTTTTTTTTTATATATVSATNPSGTNGKDNTSNSSTSGNPANSLPSTLPRSNSLPHS
SNPTXGSTPNSHTGNSSSSTTTTTTPRPRPPTTTTTTTKGNSIIDSAFIATGVSKFATLS
LHDSRKERHEKDHKRNHSMGHISSKSSDKLNQLSSTRTAKAEAAKTLGTLLCPRMEDVPL
LEPLVCKKIAHERLTVLIFLEDCLVTACQEGFVCTWARPGKVGLLSSQNNPANSPSGTVV
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagggaggagggaaggagatgaacgaaattaaaactcaattcaccacccga
gaaggtgtctacaagctcctcactcactcagagtacagccggcccaacagggtgcctttc
aactcgcagggatccaaccccgtcaaggtctccttcgttaacgtgaacgaccagtccggg
aacggggaccggatctgtttcaatgtgggccgggagctctacttctacatctacaaaggc
gtgagaaaggctgctgatcttagtaagcccatagacaagaggatatacaaaggaacgcag
cccacatgtcatgacttcaacccgatcacagccacagcagagagcgtctccctgctggtg
ggcttctcggcgggccaggtgcagctcatcgacccaataaagaaggagacgagcaaactc
ttcaatgaagagagactaatagacaagtcacgagtaacgtgcgtacgatgggttcctggt
tcggagagcttgtttctggtggctcactccagcggcagcatgtatttgtacaacgtggaa
aacacctgcggcaccacggcacctcactaccagctcctcaagcagggtgagaactatgcc
gtgcacacctgcaagagcaagtcggctcgcaacccgctgctgcgctggacagtcggcgaa
ggggcgctcaacgagttcgccttctccccggacggcaagttcctggcctgcgcgagccag
gacggcttcctgcgggtgttcggcttcgacgccgcggagctccacgggacgatgaagagc
tacttcggcggcctgctgtgcgtgtgctggagccccgacggacggtacattgtggcggga
ggggaggacgacctggtgacggtgtggtcgttttcggactgcagggtgatcgcacggggc
cacggacacaagtcgtgggtgagcgtggtggcgttcgaccactgcaccaccagcgtggag
gacgggngaccccctgccgagttcagcggcagcgacgaggagttccacgagcagattcac
ttcggcgtgggccgagacagagccaacagcgctcactctcggctctctaagaggaactct
acggacagcaggcctgttagtgtgacctacagattcggctcagtgggacaggacacccag
ctgtgtctgtgggacctgacggaggacattcttttccctcacctcccgttgtcccgcact
aggactcatactaatgttatgagtgctacaagccctccagccactggacaaaatactact
actgctactacaactacaactactactacgactactactgctactgctactgctactgta
tcggccactaatcccagtggcaccaacggtaaagacaatacgagcaatagcagcaccagt
ggcaacccggcgaactccctccccagcaccctgcctcggtccaacagcttgccacactcc
tccaacccaacanggggcagcacccccaacagtcacacaggcaacagcagcagcagcacc
accaccaccaccaccccccgaccacgaccaccaaccaccaccaccacaacgaccaagggc
aacagcatcatcgacagcgcgttcatcgccacgggcgtcagcaagttcgcgacgctgtcg
ttgcacgactcgcgcaaggagcgccacgagaaggaccacaagcggaaccacagcatgggc
cacatcagcagcaagagcagcgacaagctcaaccagctcagctcgacgcggacggcgaaa
gcggaggcggccaagactctgggcaccctgctgtgcccgcgcatggaggacgtgccgctg
ctcgagccgctggtgtgcaagaagatcgctcacgagagactcactgtgttaatcttcctt
gaggactgtctggtaacagcctgtcaggagggtttcgtttgcacatgggctaggcccggg
aaagtgggtttgctatcatctcaaaacaacccagccaactcccccagtggaacagtagta
tag
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